FFCP PHASE1:Hg19::chr15:35086926..35086948,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=70 | |EntrezGene=70 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=143 | |HGNC=143 | ||
|TSSclassifier=strong | |||
|UniProt=P68032 | |UniProt=P68032 | ||
|association_with_transcript=60bp_to_AB590199,CR541795,CU679551,DQ893096,DQ896369_5end | |association_with_transcript=60bp_to_AB590199,CR541795,CU679551,DQ893096,DQ896369_5end | ||
|cluster_id=chr15:35086926..35086948,- | |||
|coexpression_cluster_id=C352 | |||
|description=CAGE_peak_4_at_ACTC1_5end | |description=CAGE_peak_4_at_ACTC1_5end | ||
|id=chr15:35086926..35086948,- | |id=chr15:35086926..35086948,- | ||
|ontology_enrichment_celltype=CL:0000188!2.96e-15!9;CL:0000594!2.11e-07!3;CL:0002580!3.56e-07!3;CL:0002579!9.84e-07!3 | |ontology_enrichment_celltype=CL:0000188!2.96e-15!9;CL:0000594!2.11e-07!3;CL:0002580!3.56e-07!3;CL:0002579!9.84e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000680;3.15e-17;7!CL:0000515;3.87e-15;3!CL:0000188;2.65e-13;9!CL:0000056;1.76e-11;4!CL:0000594;1.75e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,3.26e-13,9;CL:0000515,1.42e-11,4;CL:0000594,1.87e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0005062;4.41e-12;4!UBERON:0007284;4.41e-12;4!CL:0000515;1.76e-11;4!UBERON:0006965;3.98e-10;2!UBERON:0006603;3.91e-07;65 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;2.52e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,2.59e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0004151!1.73e-08!3;UBERON:0003978!2.04e-08!3;UBERON:0009751!2.04e-08!3;UBERON:0000946!2.04e-08!3;UBERON:0002523!2.04e-08!3;UBERON:0005983!2.04e-08!3;UBERON:0002165!2.04e-08!3;UBERON:0002062!2.04e-08!3;UBERON:0007280!2.04e-08!3;UBERON:0006947!2.68e-07!3;UBERON:0004054!2.68e-07!3;UBERON:0007023!4.00e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0001134;2.10e-28;16!UBERON:0002036;2.10e-28;16!UBERON:0002385;2.09e-16;31!UBERON:0001015;2.09e-16;31!UBERON:0000383;2.09e-16;31!UBERON:0004151;4.33e-16;3!UBERON:0003978;5.99e-16;3!UBERON:0000946;5.99e-16;3!UBERON:0007100;4.95e-15;25!UBERON:0002081;3.01e-11;2!UBERON:0002133;3.67e-11;2!UBERON:0000341;8.11e-11;2!UBERON:0000948;8.34e-08;22!UBERON:0006947;4.98e-07;3!UBERON:0004054;4.98e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,4.23e-16,3;UBERON:0003978,6.00e-16,3;UBERON:0009751,6.00e-16,3;UBERON:0000946,6.00e-16,3;UBERON:0002523,6.00e-16,3;UBERON:0005983,6.00e-16,3;UBERON:0002165,6.00e-16,3;UBERON:0002062,6.00e-16,3;UBERON:0007280,6.00e-16,3;UBERON:0007100,8.55e-14,27;UBERON:0002081,3.01e-11,2;UBERON:0010227,3.01e-11,2;UBERON:0002133,3.68e-11,2;UBERON:0003103,3.94e-11,68;UBERON:0000341,6.67e-11,2;UBERON:0007023,1.17e-09,114;UBERON:0000948,4.22e-07,24;UBERON:0005498,4.22e-07,24;UBERON:0004140,4.22e-07,24;UBERON:0009881,4.22e-07,24;UBERON:0004141,4.22e-07,24;UBERON:0003084,4.22e-07,24;UBERON:0007005,4.22e-07,24;UBERON:0004139,4.22e-07,24;UBERON:0004291,4.22e-07,24;UBERON:0004797,4.45e-07,7;UBERON:0002385,5.25e-07,64;UBERON:0001015,5.25e-07,64;UBERON:0000383,5.25e-07,64;UBERON:0006947,5.83e-07,3;UBERON:0004054,5.83e-07,3 | |||
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| ||
|short_description=p4@ACTC1 | |short_description=p4@ACTC1 | ||
}} | }} |
Latest revision as of 07:30, 17 September 2015
Short description: | p4@ACTC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACTC1_5end |
Coexpression cluster: | C352_heart_mesenchymal_Skeletal_Pericytes_left_skeletal_Myoblast |
Association with transcript: | 60bp_to_AB590199, CR541795, CU679551, DQ893096, DQ896369_5end |
EntrezGene: | ACTC1 |
HGNC: | 143 |
UniProt: | P68032 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 3.26e-13 | 9 |
skeletal muscle myoblast | 1.42e-11 | 4 |
skeletal muscle satellite cell | 1.87e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 4.23e-16 | 3 |
valve | 6.00e-16 | 3 |
cardiac mesenchyme | 6.00e-16 | 3 |
cardial valve | 6.00e-16 | 3 |
tunica intima | 6.00e-16 | 3 |
heart layer | 6.00e-16 | 3 |
endocardium | 6.00e-16 | 3 |
endocardial cushion | 6.00e-16 | 3 |
presumptive endocardium | 6.00e-16 | 3 |
primary circulatory organ | 8.55e-14 | 27 |
cardiac atrium | 3.01e-11 | 2 |
future cardiac atrium | 3.01e-11 | 2 |
atrioventricular valve | 3.68e-11 | 2 |
compound organ | 3.94e-11 | 68 |
throat | 6.67e-11 | 2 |
adult organism | 1.17e-09 | 114 |
heart | 4.22e-07 | 24 |
primitive heart tube | 4.22e-07 | 24 |
primary heart field | 4.22e-07 | 24 |
anterior lateral plate mesoderm | 4.22e-07 | 24 |
heart tube | 4.22e-07 | 24 |
heart primordium | 4.22e-07 | 24 |
cardiac mesoderm | 4.22e-07 | 24 |
cardiogenic plate | 4.22e-07 | 24 |
heart rudiment | 4.22e-07 | 24 |
blood vessel layer | 4.45e-07 | 7 |
muscle tissue | 5.25e-07 | 64 |
musculature | 5.25e-07 | 64 |
musculature of body | 5.25e-07 | 64 |
male genital duct | 5.83e-07 | 3 |
internal male genitalia | 5.83e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 2.59e-11 | 2 |