FFCP PHASE1:Hg19::chr10:101943500..101943521,+: Difference between revisions
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|id=chr10:101943500..101943521,+
|short_description=p@chr10:101943500..101943521,+
|description=CAGE_peak_at_chr10:101943500..101943521,+
|association_with_transcri...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr10:101943500..101943521,+ | |||
|coexpression_cluster_id=C7 | |||
|description=CAGE_peak_at_chr10:101943500..101943521,+ | |||
|id=chr10:101943500..101943521,+ | |||
|ontology_enrichment_celltype=CL:0002057!9.69e-22!42;CL:0000860!3.62e-20!45;CL:0000763!5.74e-20!112;CL:0000049!5.74e-20!112;CL:0002194!1.25e-13!63;CL:0000576!1.25e-13!63;CL:0000040!1.25e-13!63;CL:0000559!1.25e-13!63;CL:0000766!3.40e-13!76;CL:0002009!3.67e-13!65;CL:0002032!1.47e-12!165;CL:0000837!1.47e-12!165;CL:0000839!4.20e-12!70;CL:0000037!6.41e-12!172;CL:0000566!6.41e-12!172;CL:0000557!6.56e-12!71;CL:0000988!4.34e-11!182 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.83e-35;33!CL:0002057;4.83e-35;33!CL:0000473;8.84e-23;39!CL:0000234;8.84e-23;39!CL:0000576;3.62e-21;48!CL:0000766;9.10e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,7.00e-29,42;CL:0002057,7.00e-29,42;CL:0000473,2.69e-25,48;CL:0000234,2.69e-25,48;CL:0002194,2.85e-20,59;CL:0000576,2.85e-20,59;CL:0000040,2.85e-20,59;CL:0000559,2.85e-20,59;CL:0002009,1.27e-19,61;CL:0000839,3.63e-18,66;CL:0000557,6.69e-18,67;CL:0000766,1.11e-16,72;CL:0000763,3.49e-11,108;CL:0000049,3.49e-11,108;CL:0002087,1.65e-10,115;CL:0002031,4.51e-10,120;CL:0000738,6.88e-09,136;CL:0002032,1.68e-07,161;CL:0000837,1.68e-07,161;CL:0000037,3.48e-07,168;CL:0000988,8.17e-07,177 | |||
|ontology_enrichment_development_v019=UBERON:0005425;9.79e-26;1!CL:0002057;1.68e-20;42!UBERON:0003056;1.67e-09;3 | |||
|ontology_enrichment_disease=DOID:0050619!4.15e-09!1;DOID:1357!4.15e-09!1;DOID:8692!9.76e-09!31;DOID:1240!7.62e-07!39 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001474!2.20e-11!86;UBERON:0004765!3.62e-11!101;UBERON:0001434!3.62e-11!101;UBERON:0002371!2.22e-10!80;UBERON:0000941!1.43e-09!1;UBERON:0004904!1.43e-09!1;UBERON:0002464!1.43e-09!1;UBERON:0001021!1.43e-09!1;UBERON:0001785!1.43e-09!1;UBERON:0001764!4.15e-09!1;UBERON:0001825!4.15e-09!1;UBERON:0002390!9.13e-08!102;UBERON:0003061!9.13e-08!102;UBERON:0002204!6.19e-07!167;UBERON:0002193!6.46e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;9.79e-26;1!UBERON:0001785;9.79e-26;1!UBERON:0002464;9.79e-26;1!UBERON:0004904;9.79e-26;1!UBERON:0001021;9.79e-26;1!UBERON:0003714;1.37e-13;2!UBERON:0005162;1.37e-13;2!UBERON:0000122;1.37e-13;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,1.26e-25,1;UBERON:0001785,1.26e-25,1;UBERON:0002464,1.26e-25,1;UBERON:0004904,1.26e-25,1;UBERON:0001021,1.26e-25,1;UBERON:0003902,1.26e-25,1;UBERON:0005425,1.26e-25,1;UBERON:0002371,8.08e-16,76;UBERON:0001474,1.11e-14,82;UBERON:0003714,1.55e-13,2;UBERON:0005162,1.55e-13,2;UBERON:0000122,1.55e-13,2;UBERON:0004765,2.15e-13,90;UBERON:0002405,5.74e-13,93;UBERON:0002390,2.59e-12,98;UBERON:0003061,2.59e-12,98;UBERON:0001434,4.53e-12,100;UBERON:0002193,3.49e-11,108;UBERON:0001781,2.04e-07,4;UBERON:0002204,3.15e-07,167 | |||
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|short_description=p@chr10:101943500..101943521,+ | |||
}} | }} |
Latest revision as of 09:27, 23 July 2015
Short description: | p@chr10:101943500..101943521, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:101943500..101943521, + |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 7.00e-29 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.00e-29 | 42 |
defensive cell | 2.69e-25 | 48 |
phagocyte | 2.69e-25 | 48 |
monopoietic cell | 2.85e-20 | 59 |
monocyte | 2.85e-20 | 59 |
monoblast | 2.85e-20 | 59 |
promonocyte | 2.85e-20 | 59 |
macrophage dendritic cell progenitor | 1.27e-19 | 61 |
myeloid lineage restricted progenitor cell | 3.63e-18 | 66 |
granulocyte monocyte progenitor cell | 6.69e-18 | 67 |
myeloid leukocyte | 1.11e-16 | 72 |
myeloid cell | 3.49e-11 | 108 |
common myeloid progenitor | 3.49e-11 | 108 |
nongranular leukocyte | 1.65e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 4.51e-10 | 120 |
leukocyte | 6.88e-09 | 136 |
hematopoietic oligopotent progenitor cell | 1.68e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-07 | 161 |
hematopoietic stem cell | 3.48e-07 | 168 |
hematopoietic cell | 8.17e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 1.26e-25 | 1 |
cranial nerve | 1.26e-25 | 1 |
nerve trunk | 1.26e-25 | 1 |
nerve connecting eye with brain | 1.26e-25 | 1 |
nerve | 1.26e-25 | 1 |
retinal neural layer | 1.26e-25 | 1 |
presumptive neural retina | 1.26e-25 | 1 |
bone marrow | 8.08e-16 | 76 |
bone element | 1.11e-14 | 82 |
neural tissue | 1.55e-13 | 2 |
multi cell component structure | 1.55e-13 | 2 |
neuron projection bundle | 1.55e-13 | 2 |
skeletal element | 2.15e-13 | 90 |
immune system | 5.74e-13 | 93 |
hematopoietic system | 2.59e-12 | 98 |
blood island | 2.59e-12 | 98 |
skeletal system | 4.53e-12 | 100 |
hemolymphoid system | 3.49e-11 | 108 |
layer of retina | 2.04e-07 | 4 |
musculoskeletal system | 3.15e-07 | 167 |