FFCP PHASE1:Hg19::chr10:94050869..94050880,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22849 | |EntrezGene=22849 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21746 | |HGNC=21746 | ||
|TSSclassifier=strong | |||
|UniProt=B3KXC1,Q8NE35 | |UniProt=B3KXC1,Q8NE35 | ||
|association_with_transcript=0bp_to_NM_014912_5end | |association_with_transcript=0bp_to_NM_014912_5end | ||
|cluster_id=chr10:94050869..94050880,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_11_at_CPEB3_5end | |description=CAGE_peak_11_at_CPEB3_5end | ||
|id=chr10:94050869..94050880,- | |id=chr10:94050869..94050880,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009117;2.08e-27;10!UBERON:0005564;2.08e-27;10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.27e-30!115;UBERON:0001049!3.98e-29!57;UBERON:0005068!3.98e-29!57;UBERON:0006241!3.98e-29!57;UBERON:0007135!3.98e-29!57;UBERON:0002616!6.23e-28!59;UBERON:0002020!1.56e-26!34;UBERON:0003528!1.56e-26!34;UBERON:0002780!1.91e-26!41;UBERON:0001890!1.91e-26!41;UBERON:0006240!1.91e-26!41;UBERON:0001893!2.52e-26!34;UBERON:0003080!1.05e-25!42;UBERON:0001869!4.04e-25!32;UBERON:0000955!1.07e-24!69;UBERON:0006238!1.07e-24!69;UBERON:0002791!2.44e-24!33;UBERON:0001017!1.37e-21!82;UBERON:0003075!1.48e-20!86;UBERON:0007284!1.48e-20!86;UBERON:0005743!2.76e-20!86;UBERON:0002346!2.42e-19!90;UBERON:0002619!2.92e-18!22;UBERON:0000073!9.42e-18!94;UBERON:0001016!9.42e-18!94;UBERON:0001950!5.98e-17!20;UBERON:0003056!3.14e-16!61;UBERON:0000956!7.84e-16!25;UBERON:0000203!7.84e-16!25;UBERON:0000369!1.69e-14!4;UBERON:0002435!1.69e-14!4;UBERON:0000204!1.69e-14!4;UBERON:0010082!1.69e-14!4;UBERON:0000153!1.66e-13!129;UBERON:0007811!1.66e-13!129;UBERON:0000033!2.53e-13!123;UBERON:0002308!3.88e-13!9;UBERON:0000125!3.88e-13!9;UBERON:0009663!3.74e-12!7;UBERON:0005383!2.53e-11!3;UBERON:0005382!2.53e-11!3;UBERON:0002298!3.51e-10!8;UBERON:0002420!2.29e-09!9;UBERON:0007245!2.29e-09!9;UBERON:0010009!2.29e-09!9;UBERON:0010011!2.29e-09!9;UBERON:0000454!2.29e-09!9;UBERON:0000025!3.96e-09!194;UBERON:0000200!1.10e-08!6;UBERON:0004121!1.16e-08!169;UBERON:0000924!2.58e-08!173;UBERON:0006601!2.58e-08!173;UBERON:0001873!2.79e-08!2;UBERON:0010122!2.79e-08!2;UBERON:0004111!3.89e-07!241;UBERON:0001871!7.61e-07!7 | |||
|ontology_enrichment_uberon_v019=UBERON:0000473;6.50e-34;8!UBERON:0003135;4.86e-25;11!UBERON:0000991;1.02e-13;21!UBERON:0003101;3.77e-13;22!UBERON:0000079;3.77e-13;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,6.50e-34,8;UBERON:0003135,4.86e-25,11;UBERON:0000991,1.02e-13,21;UBERON:0009196,1.02e-13,21;UBERON:0009117,1.02e-13,21;UBERON:0005564,1.02e-13,21;UBERON:0004176,3.77e-13,22;UBERON:0003101,3.77e-13,22;UBERON:0000079,3.77e-13,22;UBERON:0002323,7.30e-07,46 | |||
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| ||
|short_description=p11@CPEB3 | |short_description=p11@CPEB3 | ||
}} | }} |
Latest revision as of 00:33, 20 September 2015
Short description: | p11@CPEB3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_CPEB3_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_NM_014912_5end |
EntrezGene: | CPEB3 |
HGNC: | 21746 |
UniProt: | B3KXC1Q8NE35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 6.50e-34 | 8 |
male reproductive organ | 4.86e-25 | 11 |
gonad | 1.02e-13 | 21 |
indifferent external genitalia | 1.02e-13 | 21 |
indifferent gonad | 1.02e-13 | 21 |
gonad primordium | 1.02e-13 | 21 |
external genitalia | 3.77e-13 | 22 |
male organism | 3.77e-13 | 22 |
male reproductive system | 3.77e-13 | 22 |
body cavity | 7.30e-07 | 46 |