FFCP PHASE1:Hg19::chr10:90974462..90974478,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:90974462..90974478,- | |||
|coexpression_cluster_id=C54 | |||
|description=CAGE_peak_at_chr10:90974462..90974478,- | |description=CAGE_peak_at_chr10:90974462..90974478,- | ||
|id=chr10:90974462..90974478,- | |id=chr10:90974462..90974478,- | ||
|ontology_enrichment_celltype=CL:0002194!8.23e-07!63;CL:0000576!8.23e-07!63;CL:0000040!8.23e-07!63;CL:0000559!8.23e-07!63 | |ontology_enrichment_celltype=CL:0002194!8.23e-07!63;CL:0000576!8.23e-07!63;CL:0000040!8.23e-07!63;CL:0000559!8.23e-07!63 | ||
|ontology_enrichment_celltype_v019=CL:0000235;2.11e-30;6!CL:0002619;2.31e-15;3!CL:0000840;2.03e-08;5!CL:0000451;1.43e-07;10!CL:0002521;3.41e-07;3!CL:0002567;3.41e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,2.14e-30,6;CL:0002619,2.27e-15,3;CL:0002194,2.87e-13,59;CL:0000576,2.87e-13,59;CL:0000040,2.87e-13,59;CL:0000559,2.87e-13,59;CL:0002009,9.65e-13,61;CL:0000839,1.46e-11,66;CL:0000557,2.39e-11,67;CL:0000766,2.30e-10,72;CL:0000840,2.04e-08,5;CL:0001029,2.04e-08,5;CL:0000451,1.65e-07,10;CL:0002521,2.41e-07,3;CL:0002567,3.11e-07,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060084;1.45e-15;3!DOID:127;1.45e-15;3!DOID:0060072;8.50e-12;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,1.32e-15,3;DOID:127,1.32e-15,3;DOID:0060072,7.94e-12,4 | |||
|ontology_enrichment_uberon=UBERON:0002193!2.74e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002190;3.41e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.13e-13,76;UBERON:0001474,9.57e-12,82;UBERON:0002390,1.16e-10,98;UBERON:0003061,1.16e-10,98;UBERON:0004765,2.11e-10,90;UBERON:0002405,5.86e-10,93;UBERON:0002193,2.44e-09,108;UBERON:0001434,5.00e-09,100;UBERON:0002190,2.41e-07,3;UBERON:0002204,3.69e-07,167 | |||
|phase1_expression=0.181678379270557,0.428201047781966,0,0,0.446961094427288,0,0,1.26343974685366,1.82829939739887,0,0,0.218441372130172,0,0.123766352960047,0.331397375727916,0,0,0.730310090387373,0.487932798790507,0,0,0,0,0.410623275218653,0,0,0,0,0,0,0,0,0,0,0.232401601740905,0.142169232487422,0,0,0,0,3.13481663935894,2.91504299417082,1.28787783817093,0.290796477559129,0.377875943688809,0.242584061187816,0,0,0,0,0.256160706529101,0.709446689665756,0,0.645484683583826,0,0.188242339542605,0.272906150057846,0.449446968890169,0.306083892370903,0,0,0,0.398927315243264,0.852449501065388,0.290209238628584,0,0,0.502497330513487,1.0429658368404,0.434377689410233,0.605399502633369,0.368277635987565,0.316462387440884,0.633765858935825,1.27562579979026,0.209658645508376,0.112328631146495,0.300353785683013,0,0,0.59675003159727,0.182664153764634,1.75996244461323,0,0,0.426730222566507,0.800791974072025,0.574752439954483,0.661044872784862,0,0,0,0,0,0,0,0.590129310341499,0,0,0,0,0,0,0.222820913770347,0,0,0.541607727530031,0,0,0.328875809207352,0,0,0,0,0,0.113309342697566,0.383220493601921,0,0,0,0,0.950452044448374,0,0.127986611154418,0,0.710331756132051,0,0.201606743224732,0,0,0,0,0,0,0,0.144846518960824,0,0,0.283604451492204,0.443458794925128,0.351339142772504,0,0,0,31.1565497908496,17.7612332045253,36.8293550637257,0.238490624305342,1.14398982156026,0.371457501329565,0,0,0,0,0.419499436209906,0.275118041940067,0,0.516833518338658,0.71153252537342,0.33472061276467,0,0,0,0,0,0.357198913136319,0,0,0,0,0,0,0,0.436094052142534,0,0.25326102332916,0.397227542439656,0.286836620748814,0.354668382198357,0,0,0.24666754841716,0.311211035399766,0.134710672069688,0,0.151357427644931,0,0,0,0,0.597794722207204,0,0,0,0.61246251376468,0,0.206651562351531,0,0.247266929278557,0,0,0.336672227908132,0,0,0,0,0,0.113432183160021,0,0,0.211931901159562,0.300091096084402,0.206105058476878,0,0.37223371266318,0,0.0974370051611986,0,0.0920498986422993,0,0,0.201504196455281,0.169560592310488,0,0,0.286804595389004,0,0,0,0,0,0,0,0,1.38134921352481,0,0.721879481669586,0.236613600079688,0,0.241011029883482,0.55146986366197,0.217879444092406,0,0.404493924480493,0,0,0,0,0,0,0,0,0,0.441463099414651,0.122988438543114,0.343135620597051,0.329250856225877,0,0.100528972411631,0.277765335475589,0,0,0,0,0,0.577465791044295,0.462985512576611,0,0,0,7.14029317653452,7.25413221931637,5.49935300468294,0,0.16798212819886,0.141775097242386,0.179117045405697,0,0.383382679165211,0,0,0,0,0,0.063497894292169,1.14596527667483,0,1.71072446022705,0.102827492703324,0.300343057843917,1.14330573052231,0.224262168690721,0,0.22001485746285,0,0,0,0.26593811658487,0,0.257207374262142,1.41849132023278,0.266422179016099,0.285955987316295,0,0,0.65147236858747,0.355391948742546,0,0,0,0,8.51366464488333,5.02257091432126,29.5167515276244,0,0,0,0.579125226670317,0.205476322550383,0.358121926479791,0.336255431980582,0.197030760201927,0.431255149719035,0.128343036279748,0.508189248444927,0,0,0.335032530668698,0,0,0,0,0,0.500170521059677,0,0,0.892144943985809,0,0,0.300946099727719,0,0,0,0,0.0868836144680828,0,0.343143423810856,0,0.215714200818617,0.213455115606889,0,1.66435439510497,0.30239029332968,0,0,0.841980283299221,0.384417447767103,0,0.482561763430822,0,0.154209693802656,0.355123450626254,0.164254312027618,1.03850885836724,0,0.241718899183244,0,0.276242966807689,0.68888668898764,0.364182336013434,0.524497659837696,0,0.15403067420883,0,0,0.316654886678627,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0.574265537996172,0.650060246036521,0,0,0.154048617114644,0,0.137836572484531,0.322260734604821,0.290033387828457,0.426133137080504,0.0890320356467374,0.165284915360978,0,0.127612712494584,0.10115778085555,0,0.62962469366128,0,0.308033580176089,0,0,0.18532421910392,0,1.48863347743867,0,0.190630193923825,0,0.42793898803392,0,0,0.359744915166629,1.09814811894422,0.117812402345686,0.202182481573316,0,0,0,1.21856744815642,0,0,0.424216295861138,0,0,0,0.438450885253763,0,0,0.202910376962704,0.6196469961995,0.281695602532241,0.143411352204052,0,0.35667105148125,0,0.422215270595328,0.329294892959902,0,0,0,0,0,0.188287601553558,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0.411362273086194,0.648473311192717,0,0,0,0,0.245040215981032,0.185803175125719,0,0,0.159426272728822,0,0,0.211673582723883,0,0.280797178113459,0.456469358066384,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0.33307196799782,0,0,1.17206543417515,0,0.111443384277478,0,0,0,0.307160702099232,0,0.281338832821026,0,0,1.26675244876796,0.19924798825107,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0.0986434056369336,2.3948309234694,0,0,0.371072392647405,0,0,0,1.44999915086959,0.910347586283997,0,0,0.344743373241465,0,0,0,0.241192877250816,0,0,0.295547618953547,0.219385397153973,0.10893846351899,0,0.0769502585037971,0.227884111694002,0,0.0897576444097721,0.108647371922008,0,0.0915975934018623,0,0,0.156980256395025,0.166211681900156,0,0,0,0,0,0.210998064528027,0,0,0,0,0.265372693510018,0,0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| ||
|short_description=p@chr10:90974462..90974478,- | |short_description=p@chr10:90974462..90974478,- | ||
}} | }} |
Latest revision as of 16:33, 23 July 2015
Short description: | p@chr10:90974462..90974478, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:90974462..90974478, - |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 2.14e-30 | 6 |
adult endothelial progenitor cell | 2.27e-15 | 3 |
monopoietic cell | 2.87e-13 | 59 |
monocyte | 2.87e-13 | 59 |
monoblast | 2.87e-13 | 59 |
promonocyte | 2.87e-13 | 59 |
macrophage dendritic cell progenitor | 9.65e-13 | 61 |
myeloid lineage restricted progenitor cell | 1.46e-11 | 66 |
granulocyte monocyte progenitor cell | 2.39e-11 | 67 |
myeloid leukocyte | 2.30e-10 | 72 |
immature conventional dendritic cell | 2.04e-08 | 5 |
common dendritic progenitor | 2.04e-08 | 5 |
dendritic cell | 1.65e-07 | 10 |
subcutaneous fat cell | 2.41e-07 | 3 |
light melanocyte | 3.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.13e-13 | 76 |
bone element | 9.57e-12 | 82 |
hematopoietic system | 1.16e-10 | 98 |
blood island | 1.16e-10 | 98 |
skeletal element | 2.11e-10 | 90 |
immune system | 5.86e-10 | 93 |
hemolymphoid system | 2.44e-09 | 108 |
skeletal system | 5.00e-09 | 100 |
subcutaneous adipose tissue | 2.41e-07 | 3 |
musculoskeletal system | 3.69e-07 | 167 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 1.32e-15 | 3 |
leiomyoma | 1.32e-15 | 3 |
benign neoplasm | 7.94e-12 | 4 |