FFCP PHASE1:Hg19::chr14:94640699..94640709,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57718 | |EntrezGene=57718 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23788 | |HGNC=23788 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=24bp_to_ENST00000328839_5end | |association_with_transcript=24bp_to_ENST00000328839_5end | ||
|cluster_id=chr14:94640699..94640709,+ | |||
|coexpression_cluster_id=C3464 | |||
|description=CAGE_peak_3_at_PPP4R4_5end | |description=CAGE_peak_3_at_PPP4R4_5end | ||
|id=chr14:94640699..94640709,+ | |id=chr14:94640699..94640709,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:1749!3.71e-09!14 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.45e-09;14 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,8.48e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.92e-18!57;UBERON:0005068!2.92e-18!57;UBERON:0006241!2.92e-18!57;UBERON:0007135!2.92e-18!57;UBERON:0001017!1.80e-14!82;UBERON:0005743!1.91e-14!86;UBERON:0002616!1.19e-13!59;UBERON:0000955!1.47e-13!69;UBERON:0006238!1.47e-13!69;UBERON:0007023!7.79e-12!115;UBERON:0003075!9.55e-12!86;UBERON:0007284!9.55e-12!86;UBERON:0000033!1.08e-11!123;UBERON:0000073!1.14e-11!94;UBERON:0001016!1.14e-11!94;UBERON:0003080!1.55e-11!42;UBERON:0000153!6.92e-11!129;UBERON:0007811!6.92e-11!129;UBERON:0002780!8.72e-11!41;UBERON:0001890!8.72e-11!41;UBERON:0006240!8.72e-11!41;UBERON:0002346!1.28e-10!90;UBERON:0002020!1.88e-09!34;UBERON:0003528!1.88e-09!34;UBERON:0001893!5.83e-09!34;UBERON:0002791!1.26e-08!33;UBERON:0003076!1.97e-08!15;UBERON:0003057!1.97e-08!15;UBERON:0003056!2.38e-08!61;UBERON:0001869!4.05e-08!32;UBERON:0004121!1.38e-07!169;UBERON:0000924!4.80e-07!173;UBERON:0006601!4.80e-07!173;UBERON:0002619!5.86e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0001954;1.45e-08;2!UBERON:0003022;1.45e-08;2!UBERON:0002421;1.45e-08;2!UBERON:0002600;1.45e-08;2!UBERON:0000349;2.24e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001954,1.03e-08,2;UBERON:0003022,1.03e-08,2;UBERON:0002421,1.03e-08,2;UBERON:0002600,1.03e-08,2;UBERON:0003076,2.17e-08,15;UBERON:0003057,2.17e-08,15;UBERON:0001049,2.37e-08,56;UBERON:0005068,2.37e-08,56;UBERON:0006241,2.37e-08,56;UBERON:0007135,2.37e-08,56;UBERON:0000349,1.23e-07,5 | |||
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| ||
|short_description=p3@PPP4R4 | |short_description=p3@PPP4R4 | ||
}} | }} |
Latest revision as of 17:19, 16 September 2015
Short description: | p3@PPP4R4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPP4R4_5end |
Coexpression cluster: | C3464_Small_granulosa_Fibroblast_squamous_amygdala_thalamus_epidermoid |
Association with transcript: | 24bp_to_ENST00000328839_5end |
EntrezGene: | PPP4R4 |
HGNC: | 23788 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Ammon's horn | 1.03e-08 | 2 |
lobe parts of cerebral cortex | 1.03e-08 | 2 |
hippocampal formation | 1.03e-08 | 2 |
limbic lobe | 1.03e-08 | 2 |
posterior neural tube | 2.17e-08 | 15 |
chordal neural plate | 2.17e-08 | 15 |
neural tube | 2.37e-08 | 56 |
neural rod | 2.37e-08 | 56 |
future spinal cord | 2.37e-08 | 56 |
neural keel | 2.37e-08 | 56 |
limbic system | 1.23e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 8.48e-10 | 14 |