FFCP PHASE1:Hg19::chr10:88780049..88780051,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100132929,100133093,643161,644054 | |EntrezGene=100132929,100133093,643161,644054 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23436,23584,23586,23590 | |HGNC=23436,23584,23586,23590 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VTM1 | |UniProt=Q5VTM1 | ||
|association_with_transcript=3bp_to_ENST00000444180,NM_001146157_5end | |association_with_transcript=3bp_to_ENST00000444180,NM_001146157_5end | ||
|cluster_id=chr10:88780049..88780051,+ | |||
|coexpression_cluster_id=C1597 | |||
|description=CAGE_peak_1_at_FAM25A_5end,CAGE_peak_1_at_FAM25B_5end,CAGE_peak_1_at_FAM25C_5end,CAGE_peak_1_at_FAM25G_5end | |description=CAGE_peak_1_at_FAM25A_5end,CAGE_peak_1_at_FAM25B_5end,CAGE_peak_1_at_FAM25C_5end,CAGE_peak_1_at_FAM25G_5end | ||
|id=chr10:88780049..88780051,+ | |id=chr10:88780049..88780051,+ | ||
|ontology_enrichment_celltype=CL:0002076!1.45e-15!43;CL:0002159!1.80e-15!13;CL:0000066!5.12e-14!254;CL:0000622!6.38e-14!5;CL:0000154!1.57e-11!6;CL:0000223!2.08e-11!59;CL:0002623!5.74e-09!3;CL:0002621!6.56e-09!3;CL:0000362!1.69e-08!8;CL:0000150!1.53e-07!9;CL:0000240!2.40e-07!6;CL:0000311!2.40e-07!6;CL:0000079!2.40e-07!6;CL:0000237!2.40e-07!6;CL:0000036!2.40e-07!6;CL:0000357!2.40e-07!6;CL:0000114!2.40e-07!6;CL:0002149!2.44e-07!6;CL:0002255!2.44e-07!6;CL:0002251!5.84e-07!21;CL:0000575!9.09e-07!2 | |ontology_enrichment_celltype=CL:0002076!1.45e-15!43;CL:0002159!1.80e-15!13;CL:0000066!5.12e-14!254;CL:0000622!6.38e-14!5;CL:0000154!1.57e-11!6;CL:0000223!2.08e-11!59;CL:0002623!5.74e-09!3;CL:0002621!6.56e-09!3;CL:0000362!1.69e-08!8;CL:0000150!1.53e-07!9;CL:0000240!2.40e-07!6;CL:0000311!2.40e-07!6;CL:0000079!2.40e-07!6;CL:0000237!2.40e-07!6;CL:0000036!2.40e-07!6;CL:0000357!2.40e-07!6;CL:0000114!2.40e-07!6;CL:0002149!2.44e-07!6;CL:0002255!2.44e-07!6;CL:0002251!5.84e-07!21;CL:0000575!9.09e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000575;1.66e-12;2!CL:0002537;3.80e-11;5!CL:0002159;4.54e-10;14!CL:0002621;1.15e-08;3!CL:0002328;3.07e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000575,1.81e-12,2;CL:0002537,3.43e-11,5;CL:0002159,5.01e-10,14;CL:0002621,1.19e-08,3;CL:0002328,2.55e-08,3;CL:0002076,1.69e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0005795;2.40e-09;10!UBERON:0009143;2.30e-07;1!UBERON:0003124;8.67e-07;1!UBERON:0004874;8.67e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.28e-07!106;DOID:3001!2.44e-07!6;DOID:299!7.07e-07!25 | |ontology_enrichment_disease=DOID:305!1.28e-07!106;DOID:3001!2.44e-07!6;DOID:299!7.07e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:3151;2.52e-07;1!DOID:3149;2.52e-07;1!DOID:3111;2.92e-07;1!DOID:3603;2.92e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3151,2.52e-07,1;DOID:3149,2.52e-07,1;DOID:3111,3.01e-07,1;DOID:3603,3.01e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001737!8.77e-13!9;UBERON:0001004!5.13e-12!72;UBERON:0001557!5.38e-12!19;UBERON:0000166!2.74e-09!21;UBERON:0000072!2.76e-09!46;UBERON:0001949!6.56e-09!3;UBERON:0004119!6.67e-09!169;UBERON:0000925!6.67e-09!169;UBERON:0006595!6.67e-09!169;UBERON:0000065!9.72e-09!53;UBERON:0001041!2.98e-08!98;UBERON:0005795!3.03e-08!22;UBERON:0000165!5.56e-08!28;UBERON:0000930!5.56e-08!28;UBERON:0000077!1.24e-07!130;UBERON:0003102!2.12e-07!95;UBERON:0001007!2.64e-07!155;UBERON:0001555!2.64e-07!155;UBERON:0007026!2.64e-07!155;UBERON:0000161!3.07e-07!35;UBERON:0008947!4.46e-07!38;UBERON:0003258!4.46e-07!38;UBERON:0000995!9.30e-07!21 | |ontology_enrichment_uberon=UBERON:0001737!8.77e-13!9;UBERON:0001004!5.13e-12!72;UBERON:0001557!5.38e-12!19;UBERON:0000166!2.74e-09!21;UBERON:0000072!2.76e-09!46;UBERON:0001949!6.56e-09!3;UBERON:0004119!6.67e-09!169;UBERON:0000925!6.67e-09!169;UBERON:0006595!6.67e-09!169;UBERON:0000065!9.72e-09!53;UBERON:0001041!2.98e-08!98;UBERON:0005795!3.03e-08!22;UBERON:0000165!5.56e-08!28;UBERON:0000930!5.56e-08!28;UBERON:0000077!1.24e-07!130;UBERON:0003102!2.12e-07!95;UBERON:0001007!2.64e-07!155;UBERON:0001555!2.64e-07!155;UBERON:0007026!2.64e-07!155;UBERON:0000161!3.07e-07!35;UBERON:0008947!4.46e-07!38;UBERON:0003258!4.46e-07!38;UBERON:0000995!9.30e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.74e-09;10!UBERON:0000158;1.74e-09;10!UBERON:0001723;4.07e-09;3!UBERON:0001033;4.07e-09;3!UBERON:0001949;1.15e-08;3!UBERON:0004815;3.07e-08;3!UBERON:0002031;3.07e-08;3!UBERON:0000305;4.32e-08;7!UBERON:0005795;1.75e-07;1!UBERON:0002372;2.92e-07;1!UBERON:0001961;2.92e-07;1!UBERON:0001744;2.92e-07;1!UBERON:0001042;2.92e-07;1!UBERON:0001735;2.92e-07;1!UBERON:0000165;3.96e-07;28!UBERON:0007029;4.06e-07;1!UBERON:0000014;8.45e-07;4!UBERON:0000989;8.67e-07;1!UBERON:0000997;8.67e-07;1!UBERON:0008811;8.67e-07;1!UBERON:0005056;8.67e-07;1!UBERON:0004176;8.67e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,4.12e-10,14;UBERON:0000158,4.12e-10,14;UBERON:0000166,3.11e-09,22;UBERON:0001723,4.15e-09,3;UBERON:0001033,4.15e-09,3;UBERON:0010056,4.15e-09,3;UBERON:0001949,1.19e-08,3;UBERON:0003102,1.28e-08,99;UBERON:0004815,2.55e-08,3;UBERON:0002031,2.55e-08,3;UBERON:0000305,4.02e-08,7;UBERON:0002372,2.84e-07,1;UBERON:0001961,2.84e-07,1;UBERON:0001744,2.84e-07,1;UBERON:0001735,2.84e-07,1;UBERON:0004871,3.70e-07,8;UBERON:0000161,3.71e-07,36;UBERON:0007029,4.06e-07,1;UBERON:0000165,7.39e-07,29;UBERON:0000930,7.39e-07,29;UBERON:0000014,8.45e-07,4;UBERON:0000989,8.67e-07,1;UBERON:0008811,8.67e-07,1;UBERON:0006258,8.67e-07,1;UBERON:0005876,8.67e-07,1;UBERON:0004874,8.67e-07,1 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,1.83884244895785,1.50602959389125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,0,0,0,0,0,2.18577172975525,4.44941331341315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.02478218224572,2.72746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0.505754070234305,0.241011029883482,0,0.435758888184812,0.237270619111097,0.404493924480493,0,0.769494313892781,0,0,0,0,0,0,0,0,0,0,0.548751427043128,3.37205259772859,1.00528972411631,0.370353780634118,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.567100388969546,0.268675568108545,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.74953878978203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.206082023295445,0,0,0.574265537996172,5.85054221432869,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.48111056362756,0.670302275535787,0,0.376575203107117,0,0,3.99087138183008,0.459446800413919,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.4597352674091,1.78178808499583,11.3649459776716,0,0,0,0,0,0,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15496059865568,0,0,0,0,2.87101043758728,0,0,0,0,0,0,0,0,0,0,0.632994193584081,0,0,0,0,0,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0,0,0,0,0,0,0,0,0,0.347119476670262,1.07791637155815,0.174118413160805,0,0,0,0,0,10.7657808302146,0,0,0.137041924646751,0,0,0,0.0801588202515337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,3.86900977278975,0,6.37325906438606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.389720617678777,0,0,0,0,5.28280308396568,0,0,0,0,0,12.8689147101889,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0,0,1.1531308121143,0,0,0,0,0,0.111231401892069,0,0,0,0,0,0,0,0,0,0,0,0.414432328326074,0.6828739083758,22.811568839865,0,0,0,0,0.4582137370881,2.17144469965024,2.8666168169323,0,0,0.121917924982269,0,0,0,3.39997695141398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.47026410200984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.5366321719991,0,0,0,0,0,0,37.4472806382773,10.6092323336437,5.52286834719618,0.215166616178029,0,0,0,0,0,0,0.366724332548599,16.2758471326295,0,0,0 | ||
|short_description=p1@FAM25A,p1@FAM25B,p1@FAM25C,p1@FAM25G | |short_description=p1@FAM25A,p1@FAM25B,p1@FAM25C,p1@FAM25G | ||
}} | }} |
Latest revision as of 18:23, 19 September 2015
Short description: | p1@FAM25A, p1@FAM25B, p1@FAM25C, p1@FAM25G |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_FAM25A_5end, CAGE_peak_1_at_FAM25B_5end, CAGE_peak_1_at_FAM25C_5end, CAGE_peak_1_at_FAM25G_5end |
Coexpression cluster: | C1597_tongue_esophagus_tonsil_salivary_Urothelial_uterus_Sebocyte |
Association with transcript: | 3bp_to_ENST00000444180, NM_001146157_5end |
EntrezGene: | 100132929,100133093,643161,644054 |
HGNC: | 23584, 23586, 23590&submit=Submit 23436, 23584, 23586, 23590 |
UniProt: | Q5VTM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corneal epithelial cell | 1.81e-12 | 2 |
amnion mesenchymal stem cell | 3.43e-11 | 5 |
general ecto-epithelial cell | 5.01e-10 | 14 |
gingival epithelial cell | 1.19e-08 | 3 |
bronchial epithelial cell | 2.55e-08 | 3 |
endo-epithelial cell | 1.69e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 4.12e-10 | 14 |
membranous layer | 4.12e-10 | 14 |
oral opening | 3.11e-09 | 22 |
tongue | 4.15e-09 | 3 |
gustatory system | 4.15e-09 | 3 |
future tongue | 4.15e-09 | 3 |
gingival epithelium | 1.19e-08 | 3 |
surface structure | 1.28e-08 | 99 |
lower respiratory tract epithelium | 2.55e-08 | 3 |
epithelium of bronchus | 2.55e-08 | 3 |
amnion | 4.02e-08 | 7 |
tonsil | 2.84e-07 | 1 |
mucosa-associated lymphoid tissue | 2.84e-07 | 1 |
lymphoid tissue | 2.84e-07 | 1 |
tonsillar ring | 2.84e-07 | 1 |
somatic layer of lateral plate mesoderm | 3.70e-07 | 8 |
orifice | 3.71e-07 | 36 |
surface | 4.06e-07 | 1 |
mouth | 7.39e-07 | 29 |
stomodeum | 7.39e-07 | 29 |
zone of skin | 8.45e-07 | 4 |
penis | 8.67e-07 | 1 |
intromittent organ | 8.67e-07 | 1 |
lateral plate mesenchyme | 8.67e-07 | 1 |
undifferentiated genital tubercle | 8.67e-07 | 1 |
somatopleure | 8.67e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 2.52e-07 | 1 |
keratoacanthoma | 2.52e-07 | 1 |
cystadenocarcinoma | 3.01e-07 | 1 |
mucinous cystadenocarcinoma | 3.01e-07 | 1 |