FFCP PHASE1:Mm9::chr6:41555495..41555568,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=13848 | |EntrezGene=13848 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=O08644,F8WHT4 | |UniProt=O08644,F8WHT4 | ||
|association_with_transcript=14bp_to_ENSMUST00000031903,ENSMUST00000114732,ENSMUST00000114733,NM_001146351,NM_007680,uc009bqa.2,uc009bqb.2_5end | |association_with_transcript=14bp_to_ENSMUST00000031903,ENSMUST00000114732,ENSMUST00000114733,NM_001146351,NM_007680,uc009bqa.2,uc009bqb.2_5end | ||
|cluster_id=chr6:41555495..41555568,+ | |||
|description=CAGE_peak_1_at_Ephb6_5end | |description=CAGE_peak_1_at_Ephb6_5end | ||
|id=chr6:41555495..41555568,+ | |id=chr6:41555495..41555568,+ | ||
|ontology_enrichment_celltype=CL:0000117!4.77e-08!23;CL:0000337!4.77e-08!23 | |ontology_enrichment_celltype=CL:0000117!4.77e-08!23;CL:0000337!4.77e-08!23 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.34e-08,23;CL:0000337,4.34e-08,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007811!4.32e-23!86;UBERON:0000153!5.41e-23!94;UBERON:0004121!7.95e-18!102;UBERON:0000924!7.95e-18!102;UBERON:0006601!7.95e-18!102;UBERON:0000033!3.50e-15!63;UBERON:0001017!5.88e-15!73;UBERON:0005743!5.88e-15!73;UBERON:0001049!9.39e-15!52;UBERON:0005068!9.39e-15!52;UBERON:0006241!9.39e-15!52;UBERON:0007135!9.39e-15!52;UBERON:0002020!2.50e-14!34;UBERON:0000073!4.49e-14!75;UBERON:0001016!4.49e-14!75;UBERON:0002616!4.77e-13!49;UBERON:0000955!4.80e-13!50;UBERON:0006238!4.80e-13!50;UBERON:0002346!6.56e-13!71;UBERON:0003075!6.56e-13!71;UBERON:0007284!6.56e-13!71;UBERON:0003056!2.57e-12!49;UBERON:0002791!5.55e-12!29;UBERON:0003528!5.55e-12!29;UBERON:0001893!5.55e-12!29;UBERON:0003080!7.34e-12!40;UBERON:0002780!2.03e-11!39;UBERON:0001890!2.03e-11!39;UBERON:0006240!2.03e-11!39;UBERON:0000956!1.30e-09!21;UBERON:0001869!1.30e-09!21;UBERON:0000203!1.30e-09!21;UBERON:0002619!2.23e-08!17;UBERON:0006562!4.93e-08!24;UBERON:0001557!4.93e-08!24;UBERON:0001042!4.93e-08!24;UBERON:0008814!4.93e-08!24;UBERON:0009145!4.93e-08!24;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10;UBERON:0003408!1.11e-07!24;UBERON:0002370!1.46e-07!23;UBERON:0000974!1.46e-07!23;UBERON:0004807!1.46e-07!23;UBERON:0005058!1.46e-07!23;UBERON:0003351!1.46e-07!23;UBERON:0009113!1.46e-07!23;UBERON:0003295!1.46e-07!23;UBERON:0009722!1.46e-07!23;UBERON:0005562!1.46e-07!23;UBERON:0007690!1.46e-07!23;UBERON:0000064!2.69e-07!99;UBERON:0000475!4.42e-07!200 | |ontology_enrichment_uberon=UBERON:0007811!4.32e-23!86;UBERON:0000153!5.41e-23!94;UBERON:0004121!7.95e-18!102;UBERON:0000924!7.95e-18!102;UBERON:0006601!7.95e-18!102;UBERON:0000033!3.50e-15!63;UBERON:0001017!5.88e-15!73;UBERON:0005743!5.88e-15!73;UBERON:0001049!9.39e-15!52;UBERON:0005068!9.39e-15!52;UBERON:0006241!9.39e-15!52;UBERON:0007135!9.39e-15!52;UBERON:0002020!2.50e-14!34;UBERON:0000073!4.49e-14!75;UBERON:0001016!4.49e-14!75;UBERON:0002616!4.77e-13!49;UBERON:0000955!4.80e-13!50;UBERON:0006238!4.80e-13!50;UBERON:0002346!6.56e-13!71;UBERON:0003075!6.56e-13!71;UBERON:0007284!6.56e-13!71;UBERON:0003056!2.57e-12!49;UBERON:0002791!5.55e-12!29;UBERON:0003528!5.55e-12!29;UBERON:0001893!5.55e-12!29;UBERON:0003080!7.34e-12!40;UBERON:0002780!2.03e-11!39;UBERON:0001890!2.03e-11!39;UBERON:0006240!2.03e-11!39;UBERON:0000956!1.30e-09!21;UBERON:0001869!1.30e-09!21;UBERON:0000203!1.30e-09!21;UBERON:0002619!2.23e-08!17;UBERON:0006562!4.93e-08!24;UBERON:0001557!4.93e-08!24;UBERON:0001042!4.93e-08!24;UBERON:0008814!4.93e-08!24;UBERON:0009145!4.93e-08!24;UBERON:0002021!1.02e-07!10;UBERON:0000411!1.02e-07!10;UBERON:0001950!1.02e-07!10;UBERON:0003408!1.11e-07!24;UBERON:0002370!1.46e-07!23;UBERON:0000974!1.46e-07!23;UBERON:0004807!1.46e-07!23;UBERON:0005058!1.46e-07!23;UBERON:0003351!1.46e-07!23;UBERON:0009113!1.46e-07!23;UBERON:0003295!1.46e-07!23;UBERON:0009722!1.46e-07!23;UBERON:0005562!1.46e-07!23;UBERON:0007690!1.46e-07!23;UBERON:0000064!2.69e-07!99;UBERON:0000475!4.42e-07!200 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,6.94e-19,95;UBERON:0000924,6.94e-19,95;UBERON:0006601,6.94e-19,95;UBERON:0010371,2.01e-17,73;UBERON:0000073,1.82e-15,54;UBERON:0001017,4.84e-15,73;UBERON:0001049,7.76e-15,52;UBERON:0005068,7.76e-15,52;UBERON:0006241,7.76e-15,52;UBERON:0007135,7.76e-15,52;UBERON:0002020,2.08e-14,34;UBERON:0002346,3.04e-14,64;UBERON:0003075,3.04e-14,64;UBERON:0007284,3.04e-14,64;UBERON:0001016,4.91e-14,75;UBERON:0003056,2.20e-12,49;UBERON:0002616,4.16e-12,46;UBERON:0000955,4.18e-12,47;UBERON:0006238,4.18e-12,47;UBERON:0003528,4.77e-12,29;UBERON:0002791,4.77e-12,29;UBERON:0001893,4.77e-12,29;UBERON:0003080,6.32e-12,40;UBERON:0002780,1.76e-11,39;UBERON:0001890,1.76e-11,39;UBERON:0006240,1.76e-11,39;UBERON:0000956,1.15e-09,21;UBERON:0001869,1.15e-09,21;UBERON:0000203,1.15e-09,21;UBERON:0000153,1.15e-09,43;UBERON:0007811,2.49e-09,36;UBERON:0010314,1.98e-08,92;UBERON:0002619,2.02e-08,17;UBERON:0006562,4.48e-08,24;UBERON:0001557,4.48e-08,24;UBERON:0001042,4.48e-08,24;UBERON:0008814,4.48e-08,24;UBERON:0009145,4.48e-08,24;UBERON:0002021,9.36e-08,10;UBERON:0000411,9.36e-08,10;UBERON:0001950,9.36e-08,10;UBERON:0003408,1.02e-07,24;UBERON:0002370,1.34e-07,23;UBERON:0000974,1.34e-07,23;UBERON:0004807,1.34e-07,23;UBERON:0005058,1.34e-07,23;UBERON:0003351,1.34e-07,23;UBERON:0009113,1.34e-07,23;UBERON:0003295,1.34e-07,23;UBERON:0009722,1.34e-07,23;UBERON:0005562,1.34e-07,23;UBERON:0007690,1.34e-07,23 | |||
|phase1_expression=11.2104192973356,1.04692622291808,0,0,0,0,0.233612640595526,33.3138174479267,2.81577444303333,2.80877431586392,1.54096171402954,1.99430397488341,13.1824562047028,21.4179985926544,0,0.607425802169478,0.699561878128147,0.630924330716475,1.7824876368746,0,8.33424243480484,3.97163804803541,2.08959831311148,0,0,0.57423196411502,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,2.26614272356039,4.66333883609767,1.83546752161682,11.7358701652206,6.75877984779384,9.00713349211335,9.72149495371417,2.79972843250725,4.31257693094915,0.167782606057736,15.2326049822382,5.37750078627942,1.54355661621568,2.86533439938757,11.8604581223812,12.1389876515759,11.6378015439847,10.775133859605,5.42151251310611,3.55717918444456,1.3498495759221,1.97773272513395,1.4209602298922,7.49000276296012,9.22123932771731,9.95420278161385,12.6905582031789,8.83364837675805,21.4238238302853,19.6573001446936,4.28717797252339,6.13411014516713,10.1114066527102,8.8092704799511,16.98241596533,11.8277030607307,11.7378796079873,11.618930737506,8.85552729946492,12.2840519560608,15.757353080887,13.4462458043593,15.9099436155781,19.9320353118744,13.047961207771,0.908714319998209,2.94729084416464,6.95674772884027,0.860423876981386,0,0,0.649776417447669,0,2.80888840263504,14.657007741713,14.0284442485549,20.1403557470894,30.844708931093,61.5967091588726,104.470148279725,120.881339536066,2.59789249213457,1.77351905832569,2.02209778005913,2.2836775943812,0.776813650941515,2.67195850316685,2.60227990149204,4.26251669636998,2.7673859670727,3.16517545160507,4.35078216402108,9.55066094105534,9.64060374164058,1.44599356919912,0,2.58826959915855,0.662524555381181,0.969750506270444,1.86391761218122,3.51336956413857,3.97948742945565,1.02182822083437,2.87556298814209,1.19980546198682,1.52484272487678,15.8778077769112,10.0650132620098,8.16753288733619,29.550134432687,38.3573185995496,11.6361304953354,12.6548185192851,9.16554274652847,6.46916247172484,11.625246887949,5.47148825304832,5.20481771850815,5.0578462975364,6.48223667299257,7.23383125611432,7.21186891004075,7.04625461566674,9.18276900685342,10.8655415710387,5.38919982332106,4.34943984385984,5.98233822157426,4.16471891612392,5.83899223373756,13.2335823278423,17.0799173218593,11.1459189418356,1.40442637462647,0.772043721344145,1.13665399758237,1.86413195281952,1.17263029990548,1.80062061461015,1.89395788468168,1.57411385397923,1.3884040159864,1.39520366850245,1.87791380979733,1.75148013550754,0.987359099480883,1.14917224855367,1.78351381000883,2.63159977365598,1.53685080703735,2.14730270016595,17.0334858336943,13.6863134464448,0,0,5.33220626338085,3.0190767341857,2.96395161040815,2.21851877085677,1.33426826306922,1.90225626112559,1.42358718463353,0.988193728344065,3.77002813200404,2.58643413653496,4.48417400373976,0.898819408654221,0.648414149624083,0.597423819763102,4.1726938209678,3.65595240351132,6.76246414038483,2.44381593414377,5.23671715352589,3.64706263429657,3.16182685621286,1.03327103585722,0.941992367048249,0.493588655687202,2.37162101669719,0.667380422864376,1.17935397067922,0.899448449539415,0.608580364165509,0,0.763877555344259,0,0.486405680325106,0,1.43768206527355,0.744281895337007,0.624075346229121,1.26289438973556,0.179397413521912,1.4473305640901,3.14080423283228,3.41084541186873,3.09633455239849,3.90413697282933,5.63256595892405,2.84760637651087,2.85652369063216,3.51240566144038,4.57141917907954,3.5434350343804,3.50800491046472,4.7520361267564,2.93564469172023,4.19482269886384,0,0,5.4094070032094,2.48343071674259,7.86697890940181,9.25972324078405,1.80328439914343,2.01976741763498,2.83957397474631,1.56175497718655,3.44677436372478,3.58453196928828,2.89638276307112,5.37845408498782,5.66734982344852,4.38383786866968,4.34816555741176,6.42642632843614,7.38088443082997,13.7110514823787,10.750539317336,4.61916344323099,1.32745138339963,4.12727081463468,4.53485335447127,2.26326095707078,2.65771703592696,2.76691633149535,4.65170927702798,3.27180356529755,7.48644494607915,0.316036757935816,1.05418608574999,2.06271086496374,1.70219802876894,6.48219938512717,5.82114077022395,4.28674070063185,7.09360934569094,4.28085162244969,5.92376474167636,8.22055362609418,0.23467170806371,0.847328283455281,3.96951116498931,38.2536106824234,26.3187015514326,26.0551835689633,36.4085649209566,40.8710840365203,1.1659233465194,13.3506217447567,1.02522528478712,4.74689796315412,2.40752885580625,0.941842285023455,0.956859594047176,0.686334519619568,2.88963330989554,4.05859211738608,2.76399947608848,7.63736494412091,4.9032079005076,4.87966721104437,3.67218158794124,5.43629569637619,9.38959024108564,8.90104686139817,10.7449492442937,6.28214260761671,1.03691978633434,8.07741107013003,0,10.3166416770345,9.92750942742586,10.5003641705786,10.5911055251739,10.8131920314098,9.15386461436881,9.11430693907651,7.7595914875026,0.241584120826006,1.72818003754719,49.2977348179958,7.09538253515575,5.03283690107653,7.01572444080093,19.692936523423,32.98110489369,35.0970712598309,36.331623684946,40.0836806294146,36.2744399677799,47.5899593845887,49.1187718928352,47.1438024037614,55.3996516340637,24.0334206632124,0,0,0.167884616364078,5.9888774149979,4.87974436173073,4.2124873581471,49.3047271881851,9.02829787263654,44.0506437241312,35.9053684475598,46.4045365885911,34.5424896510812,65.082839378211,70.2516324572421,49.2766425169218,51.7869383707854,52.5645194421677,57.9891549162038,1.45302286617847,7.58147259461959,8.02447947044431,5.34834777550247,2.51535795153579,4.04455718590031,6.66740183404846,8.44743734679466,6.73930340142812,7.07552192938633,8.11133759648767,5.65879024158229,7.30403758265083,7.10679191694049,7.52404643318534,5.71552429539688,6.48952225291191,7.5234595980845,7.00546031365621,8.53753736779504,9.25746981440622,8.69631450180754,7.15308569841963,5.81385666529314,7.81107857447244,7.27685627868418,9.14639864363863,4.99832451731901,7.06181391998481,9.53941861818155,6.52492599682958,7.78185410766951,8.59385190656348,5.11291575913688,9.64533054905707,13.4897712086491,9.35726433781634,10.7435527024149,5.54736162999646,4.63241980150983,2.31867835620421 | |phase1_expression=11.2104192973356,1.04692622291808,0,0,0,0,0.233612640595526,33.3138174479267,2.81577444303333,2.80877431586392,1.54096171402954,1.99430397488341,13.1824562047028,21.4179985926544,0,0.607425802169478,0.699561878128147,0.630924330716475,1.7824876368746,0,8.33424243480484,3.97163804803541,2.08959831311148,0,0,0.57423196411502,0.430761996159075,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0.683045484958446,0,2.26614272356039,4.66333883609767,1.83546752161682,11.7358701652206,6.75877984779384,9.00713349211335,9.72149495371417,2.79972843250725,4.31257693094915,0.167782606057736,15.2326049822382,5.37750078627942,1.54355661621568,2.86533439938757,11.8604581223812,12.1389876515759,11.6378015439847,10.775133859605,5.42151251310611,3.55717918444456,1.3498495759221,1.97773272513395,1.4209602298922,7.49000276296012,9.22123932771731,9.95420278161385,12.6905582031789,8.83364837675805,21.4238238302853,19.6573001446936,4.28717797252339,6.13411014516713,10.1114066527102,8.8092704799511,16.98241596533,11.8277030607307,11.7378796079873,11.618930737506,8.85552729946492,12.2840519560608,15.757353080887,13.4462458043593,15.9099436155781,19.9320353118744,13.047961207771,0.908714319998209,2.94729084416464,6.95674772884027,0.860423876981386,0,0,0.649776417447669,0,2.80888840263504,14.657007741713,14.0284442485549,20.1403557470894,30.844708931093,61.5967091588726,104.470148279725,120.881339536066,2.59789249213457,1.77351905832569,2.02209778005913,2.2836775943812,0.776813650941515,2.67195850316685,2.60227990149204,4.26251669636998,2.7673859670727,3.16517545160507,4.35078216402108,9.55066094105534,9.64060374164058,1.44599356919912,0,2.58826959915855,0.662524555381181,0.969750506270444,1.86391761218122,3.51336956413857,3.97948742945565,1.02182822083437,2.87556298814209,1.19980546198682,1.52484272487678,15.8778077769112,10.0650132620098,8.16753288733619,29.550134432687,38.3573185995496,11.6361304953354,12.6548185192851,9.16554274652847,6.46916247172484,11.625246887949,5.47148825304832,5.20481771850815,5.0578462975364,6.48223667299257,7.23383125611432,7.21186891004075,7.04625461566674,9.18276900685342,10.8655415710387,5.38919982332106,4.34943984385984,5.98233822157426,4.16471891612392,5.83899223373756,13.2335823278423,17.0799173218593,11.1459189418356,1.40442637462647,0.772043721344145,1.13665399758237,1.86413195281952,1.17263029990548,1.80062061461015,1.89395788468168,1.57411385397923,1.3884040159864,1.39520366850245,1.87791380979733,1.75148013550754,0.987359099480883,1.14917224855367,1.78351381000883,2.63159977365598,1.53685080703735,2.14730270016595,17.0334858336943,13.6863134464448,0,0,5.33220626338085,3.0190767341857,2.96395161040815,2.21851877085677,1.33426826306922,1.90225626112559,1.42358718463353,0.988193728344065,3.77002813200404,2.58643413653496,4.48417400373976,0.898819408654221,0.648414149624083,0.597423819763102,4.1726938209678,3.65595240351132,6.76246414038483,2.44381593414377,5.23671715352589,3.64706263429657,3.16182685621286,1.03327103585722,0.941992367048249,0.493588655687202,2.37162101669719,0.667380422864376,1.17935397067922,0.899448449539415,0.608580364165509,0,0.763877555344259,0,0.486405680325106,0,1.43768206527355,0.744281895337007,0.624075346229121,1.26289438973556,0.179397413521912,1.4473305640901,3.14080423283228,3.41084541186873,3.09633455239849,3.90413697282933,5.63256595892405,2.84760637651087,2.85652369063216,3.51240566144038,4.57141917907954,3.5434350343804,3.50800491046472,4.7520361267564,2.93564469172023,4.19482269886384,0,0,5.4094070032094,2.48343071674259,7.86697890940181,9.25972324078405,1.80328439914343,2.01976741763498,2.83957397474631,1.56175497718655,3.44677436372478,3.58453196928828,2.89638276307112,5.37845408498782,5.66734982344852,4.38383786866968,4.34816555741176,6.42642632843614,7.38088443082997,13.7110514823787,10.750539317336,4.61916344323099,1.32745138339963,4.12727081463468,4.53485335447127,2.26326095707078,2.65771703592696,2.76691633149535,4.65170927702798,3.27180356529755,7.48644494607915,0.316036757935816,1.05418608574999,2.06271086496374,1.70219802876894,6.48219938512717,5.82114077022395,4.28674070063185,7.09360934569094,4.28085162244969,5.92376474167636,8.22055362609418,0.23467170806371,0.847328283455281,3.96951116498931,38.2536106824234,26.3187015514326,26.0551835689633,36.4085649209566,40.8710840365203,1.1659233465194,13.3506217447567,1.02522528478712,4.74689796315412,2.40752885580625,0.941842285023455,0.956859594047176,0.686334519619568,2.88963330989554,4.05859211738608,2.76399947608848,7.63736494412091,4.9032079005076,4.87966721104437,3.67218158794124,5.43629569637619,9.38959024108564,8.90104686139817,10.7449492442937,6.28214260761671,1.03691978633434,8.07741107013003,0,10.3166416770345,9.92750942742586,10.5003641705786,10.5911055251739,10.8131920314098,9.15386461436881,9.11430693907651,7.7595914875026,0.241584120826006,1.72818003754719,49.2977348179958,7.09538253515575,5.03283690107653,7.01572444080093,19.692936523423,32.98110489369,35.0970712598309,36.331623684946,40.0836806294146,36.2744399677799,47.5899593845887,49.1187718928352,47.1438024037614,55.3996516340637,24.0334206632124,0,0,0.167884616364078,5.9888774149979,4.87974436173073,4.2124873581471,49.3047271881851,9.02829787263654,44.0506437241312,35.9053684475598,46.4045365885911,34.5424896510812,65.082839378211,70.2516324572421,49.2766425169218,51.7869383707854,52.5645194421677,57.9891549162038,1.45302286617847,7.58147259461959,8.02447947044431,5.34834777550247,2.51535795153579,4.04455718590031,6.66740183404846,8.44743734679466,6.73930340142812,7.07552192938633,8.11133759648767,5.65879024158229,7.30403758265083,7.10679191694049,7.52404643318534,5.71552429539688,6.48952225291191,7.5234595980845,7.00546031365621,8.53753736779504,9.25746981440622,8.69631450180754,7.15308569841963,5.81385666529314,7.81107857447244,7.27685627868418,9.14639864363863,4.99832451731901,7.06181391998481,9.53941861818155,6.52492599682958,7.78185410766951,8.59385190656348,5.11291575913688,9.64533054905707,13.4897712086491,9.35726433781634,10.7435527024149,5.54736162999646,4.63241980150983,2.31867835620421 | ||
|short_description=p1@Ephb6 | |short_description=p1@Ephb6 | ||
}} | }} |
Latest revision as of 05:32, 27 September 2015
Short description: | p1@Ephb6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ephb6_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENSMUST00000031903, ENSMUST00000114732, ENSMUST00000114733, NM_001146351, NM_007680, uc009bqa.2, uc009bqb.2_5end |
EntrezGene: | Ephb6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.34e-08 | 23 |
neuroblast (sensu Vertebrata) | 4.34e-08 | 23 |