FFCP PHASE1:Hg19::chr10:8096631..8096660,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2625 | |EntrezGene=2625 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4172 | |HGNC=4172 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000379328_5end | |association_with_transcript=0bp_to_ENST00000379328_5end | ||
|cluster_id=chr10:8096631..8096660,+ | |||
|coexpression_cluster_id=C1124 | |||
|description=CAGE_peak_1_at_GATA3_5end | |description=CAGE_peak_1_at_GATA3_5end | ||
|id=chr10:8096631..8096660,+ | |id=chr10:8096631..8096660,+ | ||
|ontology_enrichment_celltype=CL:0000084!5.23e-12!25;CL:0000827!5.23e-12!25;CL:0000791!2.18e-10!18;CL:0000789!2.18e-10!18;CL:0002420!2.18e-10!18;CL:0002419!2.18e-10!18;CL:0000790!2.18e-10!18;CL:0000838!5.48e-08!52;CL:0000542!1.53e-07!53;CL:0000051!1.53e-07!53;CL:0000625!9.88e-07!11 | |ontology_enrichment_celltype=CL:0000084!5.23e-12!25;CL:0000827!5.23e-12!25;CL:0000791!2.18e-10!18;CL:0000789!2.18e-10!18;CL:0002420!2.18e-10!18;CL:0002419!2.18e-10!18;CL:0000790!2.18e-10!18;CL:0000838!5.48e-08!52;CL:0000542!1.53e-07!53;CL:0000051!1.53e-07!53;CL:0000625!9.88e-07!11 | ||
|ontology_enrichment_celltype_v019=CL:0000084;9.12e-15;25!CL:0000791;1.82e-12;18!CL:0000789;1.82e-12;18!CL:0002419;1.82e-12;18!CL:0000625;6.23e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.01e-14,25;CL:0000827,1.01e-14,25;CL:0000791,1.88e-12,18;CL:0000789,1.88e-12,18;CL:0002420,1.88e-12,18;CL:0002419,1.88e-12,18;CL:0000790,1.88e-12,18;CL:0000838,1.25e-10,52;CL:0000542,3.46e-10,53;CL:0000051,3.46e-10,53;CL:0000625,6.00e-08,11 | |||
|ontology_enrichment_development_v019=CL:0000790;1.82e-12;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.21e-08!15;UBERON:0000179!2.21e-08!15;UBERON:0000463!2.21e-08!15;UBERON:0005631!3.43e-07!14;UBERON:0000158!3.43e-07!14 | |ontology_enrichment_uberon=UBERON:0000178!2.21e-08!15;UBERON:0000179!2.21e-08!15;UBERON:0000463!2.21e-08!15;UBERON:0005631!3.43e-07!14;UBERON:0000158!3.43e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;5.52e-10;15!UBERON:0000179;5.52e-10;15!UBERON:0000463;5.52e-10;15!UBERON:0000478;2.24e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.60e-10,15;UBERON:0000179,5.60e-10,15;UBERON:0000463,5.60e-10,15;UBERON:0005631,4.72e-09,14;UBERON:0000158,4.72e-09,14;UBERON:0001008,4.62e-08,48;UBERON:0006554,1.42e-07,47;UBERON:0000478,2.56e-07,24;UBERON:0003124,2.79e-07,7 | |||
|phase1_expression=0.181678379270557,0,0,0,0.446961094427288,0,0,0,0.261185628199839,1.72013755551056,0,103.322769017571,67.7881134047126,0.247532705920093,0.331397375727916,0,0,0,0,0.123121058076788,0,0.313454721478088,0.286235987131057,0.958120975510189,0.251085279189606,2.06316195519468,2.29881650459848,2.59745578335141,7.08055698328027,8.44424675813868,50.3152400777247,0,0,0,0,0,0,2.21598163412751,23.2631559065364,12.1526087600877,0.447830948479849,1.29557466407592,0.515151135268373,0.145398238779565,0.377875943688809,0,0.464858073811369,1.6446715520873,0.309706370895104,0.575384784644301,2.0492856522328,0.236482229888585,0.689491361473237,2.5819387343353,0,1.69418105588344,0.272906150057846,0,2.14258724659632,1.60464513538047,1.27867425159808,0.989553900560148,0.997318288108159,1.70489900213078,0.580418477257168,2.26954089876456,0.622822248995575,0,0,0.217188844705117,3.02699751316684,1.10483290796269,1.26584954976354,0,0,0,0,0,0,0,0,0,0,0.546138611262131,0,0,0,0,0,0,1.1384259382189,1.76171156811282,1.52909291250092,0,2.24203425192614,0,70.4220977007522,109.650002807017,70.7269156558312,24.5764148224297,7.17028986593899,3.78758244587787,23.3792074089494,128.010614961064,68.0539646266874,40.0976349196354,57.4104191181833,68.4007647335105,91.4317213345944,58.8687698481161,48.0849030947376,56.5116017183352,19.1289666479058,17.1226129977416,32.4060123795428,36.4856083486163,9.19729184644611,11.6833331464094,52.1220565560176,8.60126618675061,9.11516835398986,5.70271226669025,14.9069367886995,24.4454427304939,9.99445812418767,19.4157346676094,8.21127996921047,56.2482813597003,111.255121445939,31.8613688542158,0,2.01210257911091,0.767175371061182,0,0,0.144846518960824,0,0.973269740605272,0,0.221729397462564,0.527008714158756,3.6019245761871,0,0.741568885568859,0,0.174129737299267,0.398873881556595,1.19245312152671,0,0.74291500265913,2.78267370313387,1.72046919021225,6.59566953054429,1.69592382577203,2.51699661725944,0.275118041940067,1.8809546988313,0.258416759169329,0.35576626268671,0.66944122552934,2.01414658554573,1.52054421143703,1.70843440283719,1.83831540172934,0.81014194788176,5.09008451219255,10.55288051343,3.60356737546631,7.66583187329416,14.2389848935219,7.5112715011467,1.31780417436063,0,0.436094052142534,0,0.12663051166458,0,0,1.41867352879343,1.68203280042692,0,0.49333509683432,0.311211035399766,1.88594940897563,0.490385709340376,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0.103325781175765,0,0,9.10161361938026,2.15585442544872,0,0.375355559615893,0,0,0,0,0.453728732640084,0.538168907066586,0.640672166455702,0,0.300091096084402,0,0,0,0.168776332241266,0,0.252433774244115,0,0,0.355009592516614,0.503760491138201,0.169560592310488,0,0,0,0.487894824518382,0,2.90484857173796,4.87206958572241,8.32658807889574,1.09493207722749,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,2.21446636387394,1.40241773803446,0,0,0,1.96565443335525,2.36315962672562,22.5146180701472,2.95172252503473,0,5.26801369961403,4.49607013030478,3.31745608958382,0,0,0,0,1.507095264676,0.352226082707465,0,0,0.190254152234598,768.078674816415,763.194198102342,0,0.234004265139238,0.148631162288728,0,0,0,5.55262840757659,3.48760726216754,5.36735750831296,0.985326475791887,0.352193736052904,3.52457796419313,0.288239906833923,2.14612136824846,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0.532844358032199,0.285955987316295,1.08524321078289,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,1.84928690295345,0.179060963239896,7.17344921558575,53.0012744943184,80.6447129974595,52.8773309472563,0,0,0,0,0,2.99602809578873,2.99161459204025,2.90090859405225,4.53958519360818,5.00170521059677,0,0,0,0,0,0,0,3.10419213877515,0,0.368738337083406,0,0.195801157462741,0,22.1241787951489,27.1799893031457,19.9580533092441,36.3753085735511,96.5325549160883,96.1601132788383,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,1.32945394550784,23.258750555181,7.4585601038076,0,0.364182336013434,0,22.1087810324632,9.85796314936509,3.13739907670742,0,2.63879072232189,4.54933536283586,0.680374821106063,1.0795795805107,32.3877230649608,1.08378575017541,1.50506932156456,8.6657932835313,9.97291210714469,3.58199607555485,0,0,0,0.656029291399411,0,20.9173253644876,0,0,2.29706215198469,14.3013254128035,0,0,0,0,0,0.214840489736547,0,0.170453254832202,0,0.165284915360978,0.192190067365106,0,0.30347334256665,0,0.31481234683064,0,6.46870518369786,2.12922412126809,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,1.01091240786658,4.75530963519025,2.10629228119491,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.563391205064483,0,0.491245205065606,0,0,0.211107635297664,0,0,0,0,1.34060455107157,0,21.3706427763289,25.3998169876026,26.9554361068201,28.8229599798839,7.58087220682966,8.11916174771471,11.4695581071356,20.5072987382699,11.6733569974317,11.1067813733272,16.2118327798179,16.7409745543816,19.8281294073568,0,0,13.7222520949378,0,4.61661481524624,49.4435811271478,52.7700962732402,0.399158742865633,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0,70.61125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| ||
|short_description=p1@GATA3 | |short_description=p1@GATA3 | ||
}} | }} |
Latest revision as of 12:01, 19 September 2015
Short description: | p1@GATA3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GATA3_5end |
Coexpression cluster: | C1124_MCF7_breast_chorionic_nasal_choriocarcinoma_seminal_amniotic |
Association with transcript: | 0bp_to_ENST00000379328_5end |
EntrezGene: | GATA3 |
HGNC: | 4172 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.01e-14 | 25 |
pro-T cell | 1.01e-14 | 25 |
mature alpha-beta T cell | 1.88e-12 | 18 |
alpha-beta T cell | 1.88e-12 | 18 |
immature T cell | 1.88e-12 | 18 |
mature T cell | 1.88e-12 | 18 |
immature alpha-beta T cell | 1.88e-12 | 18 |
lymphoid lineage restricted progenitor cell | 1.25e-10 | 52 |
lymphocyte | 3.46e-10 | 53 |
common lymphoid progenitor | 3.46e-10 | 53 |
CD8-positive, alpha-beta T cell | 6.00e-08 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 5.60e-10 | 15 |
haemolymphatic fluid | 5.60e-10 | 15 |
organism substance | 5.60e-10 | 15 |
extraembryonic membrane | 4.72e-09 | 14 |
membranous layer | 4.72e-09 | 14 |
renal system | 4.62e-08 | 48 |
urinary system structure | 1.42e-07 | 47 |
extraembryonic structure | 2.56e-07 | 24 |
chorion | 2.79e-07 | 7 |