FFCP PHASE1:Hg19::chr10:75504105..75504190,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9632 | |EntrezGene=9632 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10705 | |HGNC=10705 | ||
|TSSclassifier=strong | |||
|UniProt=P53992,E7EP00,G5EA31,B4DZT4,F6RFB3 | |UniProt=P53992,E7EP00,G5EA31,B4DZT4,F6RFB3 | ||
|association_with_transcript=0bp_to_ENST00000339365,ENST00000345254,ENST00000411652,ENST00000465076,ENST00000535742,ENST00000540668,ENST00000546025,NM_004922,NM_198597,uc001juw.2,uc001jux.2,uc009xrj.1,uc010qkn.1,uc010qko.1,uc010qkp.1,uc010qkq.1_5end | |association_with_transcript=0bp_to_ENST00000339365,ENST00000345254,ENST00000411652,ENST00000465076,ENST00000535742,ENST00000540668,ENST00000546025,NM_004922,NM_198597,uc001juw.2,uc001jux.2,uc009xrj.1,uc010qkn.1,uc010qko.1,uc010qkp.1,uc010qkq.1_5end | ||
|cluster_id=chr10:75504105..75504190,+ | |||
|description=CAGE_peak_1_at_SEC24C_5end | |description=CAGE_peak_1_at_SEC24C_5end | ||
|id=chr10:75504105..75504190,+ | |id=chr10:75504105..75504190,+ | ||
|ontology_enrichment_celltype=CL:0000115!3.56e-08!35 | |ontology_enrichment_celltype=CL:0000115!3.56e-08!35 | ||
|ontology_enrichment_celltype_v019=CL:0000115;9.16e-08;36!CL:1000497;2.45e-07;17!CL:0002518;2.45e-07;17!CL:1000449;9.54e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,1.60e-08,36;CL:1000497,2.74e-07,17;CL:0002518,2.74e-07,17;CL:0002078,7.46e-07,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!1.21e-08!216;UBERON:0000055!6.66e-07!69;UBERON:0002049!7.00e-07!79;UBERON:0007798!7.00e-07!79;UBERON:0003887!8.44e-07!21 | |ontology_enrichment_uberon=UBERON:0003081!1.21e-08!216;UBERON:0000055!6.66e-07!69;UBERON:0002049!7.00e-07!79;UBERON:0007798!7.00e-07!79;UBERON:0003887!8.44e-07!21 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;9.54e-07;15!UBERON:0004819;9.54e-07;15!UBERON:0001285;9.54e-07;15!UBERON:0007684;9.54e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.74e-07,203;UBERON:0000055,5.77e-07,68;UBERON:0002049,6.20e-07,78;UBERON:0007798,6.20e-07,78;UBERON:0006555,8.17e-07,16;UBERON:0004819,8.17e-07,16 | |||
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|short_description=p1@SEC24C | |short_description=p1@SEC24C | ||
}} | }} |
Latest revision as of 07:38, 19 September 2015
Short description: | p1@SEC24C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SEC24C_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000339365, ENST00000345254, ENST00000411652, ENST00000465076, ENST00000535742, ENST00000540668, ENST00000546025, NM_004922, NM_198597, uc001juw.2, uc001jux.2, uc009xrj.1, uc010qkn.1, uc010qko.1, uc010qkp.1, uc010qkq.1_5end |
EntrezGene: | SEC24C |
HGNC: | 10705 |
UniProt: | P53992E7EP00G5EA31B4DZT4F6RFB3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 1.60e-08 | 36 |
kidney cell | 2.74e-07 | 17 |
kidney epithelial cell | 2.74e-07 | 17 |
meso-epithelial cell | 7.46e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.74e-07 | 203 |
vessel | 5.77e-07 | 68 |
vasculature | 6.20e-07 | 78 |
vascular system | 6.20e-07 | 78 |
excretory tube | 8.17e-07 | 16 |
kidney epithelium | 8.17e-07 | 16 |