FFCP PHASE1:Hg19::chr10:75410771..75410813,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=79933 | |EntrezGene=79933 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23532 | |HGNC=23532 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H987 | |UniProt=Q9H987 | ||
|association_with_transcript=0bp_to_ENST00000372873,NM_024875,uc001jus.3_5end | |association_with_transcript=0bp_to_ENST00000372873,NM_024875,uc001jus.3_5end | ||
|cluster_id=chr10:75410771..75410813,- | |||
|coexpression_cluster_id=C56 | |||
|description=CAGE_peak_2_at_SYNPO2L_5end | |description=CAGE_peak_2_at_SYNPO2L_5end | ||
|id=chr10:75410771..75410813,- | |id=chr10:75410771..75410813,- | ||
|ontology_enrichment_celltype=CL:0000188!2.22e-12!9 | |ontology_enrichment_celltype=CL:0000188!2.22e-12!9 | ||
|ontology_enrichment_celltype_v019=CL:0000188;5.72e-17;9!CL:0002594;7.97e-10;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000188,5.65e-17,9;CL:0002594,8.10e-10,4 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:114;1.79e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.95e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-13!115;UBERON:0000483!1.39e-07!309;UBERON:0002385!1.43e-07!63;UBERON:0001015!1.43e-07!63;UBERON:0000383!1.43e-07!63;UBERON:0000119!2.34e-07!312;UBERON:0001134!2.92e-07!61;UBERON:0002036!2.92e-07!61;UBERON:0003082!2.92e-07!61 | |ontology_enrichment_uberon=UBERON:0007023!2.22e-13!115;UBERON:0000483!1.39e-07!309;UBERON:0002385!1.43e-07!63;UBERON:0001015!1.43e-07!63;UBERON:0000383!1.43e-07!63;UBERON:0000119!2.34e-07!312;UBERON:0001134!2.92e-07!61;UBERON:0002036!2.92e-07!61;UBERON:0003082!2.92e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0001134;6.71e-26;16!UBERON:0002036;6.71e-26;16!UBERON:0007100;1.41e-12;25!UBERON:0002385;4.01e-12;31!UBERON:0001015;4.01e-12;31!UBERON:0000383;4.01e-12;31!UBERON:0005090;4.46e-10;2!UBERON:0001630;4.46e-10;2!UBERON:0001310;7.97e-10;4!UBERON:0000341;8.80e-10;2!UBERON:0003978;5.02e-07;3!UBERON:0000946;5.02e-07;3!UBERON:0004151;7.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.72e-11,27;UBERON:0001134,1.62e-10,62;UBERON:0002036,1.62e-10,62;UBERON:0003082,1.62e-10,62;UBERON:0002385,4.30e-10,64;UBERON:0001015,4.30e-10,64;UBERON:0000383,4.30e-10,64;UBERON:0005090,4.46e-10,2;UBERON:0001630,4.46e-10,2;UBERON:0001310,8.10e-10,4;UBERON:0000341,9.00e-10,2;UBERON:0002329,8.44e-09,71;UBERON:0003059,8.44e-09,71;UBERON:0007282,8.44e-09,71;UBERON:0004290,8.44e-09,71;UBERON:0009618,8.44e-09,71;UBERON:0003077,1.23e-08,72;UBERON:0007285,1.23e-08,72;UBERON:0007524,1.77e-08,73;UBERON:0005256,3.67e-08,122;UBERON:0003103,8.98e-08,68;UBERON:0007503,9.58e-08,78;UBERON:0000486,4.19e-07,83;UBERON:0003978,5.02e-07,3;UBERON:0009751,5.02e-07,3;UBERON:0000946,5.02e-07,3;UBERON:0002523,5.02e-07,3;UBERON:0005983,5.02e-07,3;UBERON:0002165,5.02e-07,3;UBERON:0002062,5.02e-07,3;UBERON:0007280,5.02e-07,3;UBERON:0003104,6.81e-07,160;UBERON:0009142,6.81e-07,160;UBERON:0004151,7.11e-07,3 | |||
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|phase1_expression=0,0,0,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,2.47705797305722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.366403487860815,0,0,0,0,0.379891534993739,0.264818361626438,0,0.354668382198357,1.12135520028461,0,0.49333509683432,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125118519871964,0,0,0,0,0.226864366320042,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.40241773803446,1.2347220339942,10.2906097969879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.84289784090821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142977993658148,0,0,0,0.355391948742546,0,3.91871190177462,6.97226766880235,2.7992437530976,0,0,0,0,0,0,0.434343920002738,0.410952645100767,0.358121926479791,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0.587403472388222,18.1866014619754,0,0,0,0,0,0,0,0,0,0.384417447767103,0,0.160853921143607,0,0,0,0,0,0,0,0,0,0,0,0.131124414959424,0,0,0,0,0,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,2.29610251989794,0,0,0.0915694648183434,0,0,0,0,3.963499449977,3.85121542786611,4.45160656705776,6.34048233428841,0.429680979473094,0.870100163485371,9.6306088980194,48.0772992492382,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316379424718726,0,0.255897791311334,0,0,0,0,0,0,0,0,0,1.95053495635836,0,0,0,0,0,0,0,0,0,0,3.04365565444056,1.239293992399,0,0,0,3.92338156629375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.371606350251437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.02555725490326,0,0,0,0,2.67268212749375,0,0,0,0,0,0,0.19924798825107,0,0,0.20453736500431,0.123084805461069,0,0,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539209063845416,9.63093176758547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57254001417827,0,0,0,0,0.484945082442097,0,0.451961481561065,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0.600420288709789,0,0,0,0,13.6848376623405,24.2910049452385,0,4.99197501247478,3.004582336956,5.35611497860494,108.165390703629,0.360299883542404,0,0,0,0.0674035438541849,0,0.0846733320657845,0,0,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,27.1584224021879,4.63464379255802,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.18628920882415,0,0,2.27473676312472,0,0,0,0,0,0,0,0.189403005275089,0,0,0,0,0,0,0,0,0,0,0,0,0,0.761610424337591,0,0,0,0,0,3.20022211730523,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.70908164046162,0,0,0,0,0,0,0,0,0.318004350653419,0.0788617450012534,0,0,0,0.0642292250964595,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0.20170506870352,0,0,0,0,0.202612753855184,0.781078098613847,0,0.126831620387814,0,0,7.44316767583941,0,0,0,0,0,0,0,0.115233987555779,0,0.40781839786099,0.197318320688547,0,0,0,0,0,0,0,0,0,0,0,0.347716544605159,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0,0,18.1280074412611,26.589666975768,41.7533195281752,2.91426595835484,0,0,0,0,0,0,0.0771741581079447,0.218559560503957,0,0,0,0.785233868459781,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0.5290268405154,0,0,0,0.126166424835079,0,0,0,0,0,0,0.151557396436479,0,0.829169439458779,0,5.33084954752452,7.61806180683969,0,0.0620747142958579,0,0,0.202117188958219,1.95945073107265,5.4757328173645,0.5388164241167,0.0717222053926763,1.33064142618405,0,0,0,0,2.34640942403454,0,0,0,0.402547587182052,0.320568492303233 | ||
|short_description=p2@SYNPO2L | |short_description=p2@SYNPO2L | ||
}} | }} |
Latest revision as of 07:30, 19 September 2015
Short description: | p2@SYNPO2L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYNPO2L_5end |
Coexpression cluster: | C56_heart_left_umbilical_skeletal_penis_diaphragm_tongue |
Association with transcript: | 0bp_to_ENST00000372873, NM_024875, uc001jus.3_5end |
EntrezGene: | SYNPO2L |
HGNC: | 23532 |
UniProt: | Q9H987 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cell of skeletal muscle | 5.65e-17 | 9 |
smooth muscle cell of the umbilical artery | 8.10e-10 | 4 |
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.72e-11 | 27 |
skeletal muscle tissue | 1.62e-10 | 62 |
striated muscle tissue | 1.62e-10 | 62 |
myotome | 1.62e-10 | 62 |
muscle tissue | 4.30e-10 | 64 |
musculature | 4.30e-10 | 64 |
musculature of body | 4.30e-10 | 64 |
muscle structure | 4.46e-10 | 2 |
muscle organ | 4.46e-10 | 2 |
umbilical artery | 8.10e-10 | 4 |
throat | 9.00e-10 | 2 |
somite | 8.44e-09 | 71 |
presomitic mesoderm | 8.44e-09 | 71 |
presumptive segmental plate | 8.44e-09 | 71 |
dermomyotome | 8.44e-09 | 71 |
trunk paraxial mesoderm | 8.44e-09 | 71 |
paraxial mesoderm | 1.23e-08 | 72 |
presumptive paraxial mesoderm | 1.23e-08 | 72 |
dense mesenchyme tissue | 1.77e-08 | 73 |
trunk mesenchyme | 3.67e-08 | 122 |
compound organ | 8.98e-08 | 68 |
epithelial vesicle | 9.58e-08 | 78 |
multilaminar epithelium | 4.19e-07 | 83 |
valve | 5.02e-07 | 3 |
cardiac mesenchyme | 5.02e-07 | 3 |
cardial valve | 5.02e-07 | 3 |
tunica intima | 5.02e-07 | 3 |
heart layer | 5.02e-07 | 3 |
endocardium | 5.02e-07 | 3 |
endocardial cushion | 5.02e-07 | 3 |
presumptive endocardium | 5.02e-07 | 3 |
mesenchyme | 6.81e-07 | 160 |
entire embryonic mesenchyme | 6.81e-07 | 160 |
cardiac chamber | 7.11e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.95e-09 | 2 |