FFCP PHASE1:Hg19::chr10:71562326..71562337,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1305 | |EntrezGene=1305 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2190 | |HGNC=2190 | ||
|TSSclassifier=strong | |||
|UniProt=Q5TAT6 | |UniProt=Q5TAT6 | ||
|association_with_transcript=18bp_to_M59217_5end | |association_with_transcript=18bp_to_M59217_5end | ||
|cluster_id=chr10:71562326..71562337,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_7_at_COL13A1_5end | |description=CAGE_peak_7_at_COL13A1_5end | ||
|id=chr10:71562326..71562337,+ | |id=chr10:71562326..71562337,+ | ||
|ontology_enrichment_celltype=CL:0002274!1.36e-14!5;CL:0000457!1.36e-14!5;CL:0002191!1.36e-14!5;CL:0000097!1.36e-14!5;CL:0000831!1.36e-14!5;CL:0002028!1.36e-14!5;CL:0000163!7.22e-08!9;CL:0002551!4.44e-07!6 | |ontology_enrichment_celltype=CL:0002274!1.36e-14!5;CL:0000457!1.36e-14!5;CL:0002191!1.36e-14!5;CL:0000097!1.36e-14!5;CL:0000831!1.36e-14!5;CL:0002028!1.36e-14!5;CL:0000163!7.22e-08!9;CL:0002551!4.44e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.81e-23;5!CL:0000163;1.58e-13;9!CL:0002537;6.04e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.44e-23,5;CL:0002028,1.44e-23,5;CL:0000163,1.40e-13,9;CL:0002537,6.77e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0006215;4.05e-85;3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002037!6.23e-08!6;UBERON:0006215!6.23e-08!6;UBERON:0004733!1.31e-07!12;UBERON:0002028!1.31e-07!12;UBERON:0007277!1.31e-07!12;UBERON:0002680!1.60e-07!9;UBERON:0001895!1.60e-07!9;UBERON:0010092!1.60e-07!9;UBERON:0004732!5.84e-07!13;UBERON:0002049!5.98e-07!79;UBERON:0007798!5.98e-07!79;UBERON:0000947!9.82e-07!21;UBERON:0010191!9.82e-07!21 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;4.21e-43;6!UBERON:0002680;4.65e-29;9!UBERON:0001895;4.65e-29;9!UBERON:0004733;5.10e-22;12!UBERON:0002028;5.10e-22;12!UBERON:0004732;2.16e-20;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,4.86e-43,6;UBERON:0006215,4.86e-43,6;UBERON:0002680,5.12e-29,9;UBERON:0001895,5.12e-29,9;UBERON:0010092,5.12e-29,9;UBERON:0004733,5.48e-22,12;UBERON:0002028,5.48e-22,12;UBERON:0007277,5.48e-22,12;UBERON:0004732,2.31e-20,13;UBERON:0003076,9.28e-18,15;UBERON:0003057,9.28e-18,15 | |||
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|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672325146451775,0,0,0,0,0.408001382488506,0,0,0.136874425072884,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0,0,0,0,0,0,0,0,0,0.198762407366705,0.860234595106124,0,0.56530794192401,0,0,0.208994966536811,0,0,0.33472061276467,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25326102332916,0,0.286836620748814,0,0,0,0.24666754841716,0,0,0,0.151357427644931,0,0,0.312160076830321,0.570471821544449,0.298897361103602,0.117434498643765,0,0,0,0,0,0,0,0,0.718618141816238,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0,0,0,0.506328996723799,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0.232387885739037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115930404975077,0,0.144366447761074,0.462985512576611,0,0,0,0,0,0,0,0,0,0,0,0,0.985326475791887,1.32072651019839,1.86595303986695,0.864719720501769,0.88369703398466,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0.356857977594324,0,0.117141414992713,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0.190630193923825,0,0,0,0,0,0,0,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.349934720244983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0.19924798825107,0,0,0,0,0.311039587661807,0.179736702294654,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.291604613383254,0,0,0,4.5774520895125,3.31737779793674,1.18219047581419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32930774541437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0,0,0.121499113316049,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113312091520126,0,0,0,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.221858103073705,0,0,0,0,0,0.235265819698172,0,0,0,0.233713309847224,0,0,0,0.889811221596536,0.228840068396924,0,0,0,0.159296767163702,0,0,0.414706207840855,0,0,0,0,0.406870733204662,0,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118193840883968,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0.103432995861895,0,0,0,0,0.112131862580613,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@COL13A1 | |short_description=p7@COL13A1 | ||
}} | }} |
Latest revision as of 01:16, 19 September 2015
Short description: | p7@COL13A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_COL13A1_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | 18bp_to_M59217_5end |
EntrezGene: | COL13A1 |
HGNC: | 2190 |
UniProt: | Q5TAT6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.44e-23 | 5 |
basophil mast progenitor cell | 1.44e-23 | 5 |
endocrine cell | 1.40e-13 | 9 |
amnion mesenchymal stem cell | 6.77e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 4.86e-43 | 6 |
rhombic lip | 4.86e-43 | 6 |
regional part of metencephalon | 5.12e-29 | 9 |
metencephalon | 5.12e-29 | 9 |
future metencephalon | 5.12e-29 | 9 |
segmental subdivision of hindbrain | 5.48e-22 | 12 |
hindbrain | 5.48e-22 | 12 |
presumptive hindbrain | 5.48e-22 | 12 |
segmental subdivision of nervous system | 2.31e-20 | 13 |
posterior neural tube | 9.28e-18 | 15 |
chordal neural plate | 9.28e-18 | 15 |