FFCP PHASE1:Hg19::chr10:70847352..70847365,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5552 | |EntrezGene=5552 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9361 | |HGNC=9361 | ||
|TSSclassifier=strong | |||
|UniProt=P10124 | |UniProt=P10124 | ||
|association_with_transcript=-462bp_to_NM_002727,NR_036430,uc001joz.2_5end | |association_with_transcript=-462bp_to_NM_002727,NR_036430,uc001joz.2_5end | ||
|cluster_id=chr10:70847352..70847365,+ | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_6_at_SRGN_5end | |description=CAGE_peak_6_at_SRGN_5end | ||
|id=chr10:70847352..70847365,+ | |id=chr10:70847352..70847365,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.31e-62!172;CL:0000566!1.31e-62!172;CL:0000988!1.15e-58!182;CL:0002032!2.79e-58!165;CL:0000837!2.79e-58!165;CL:0000738!1.03e-57!140;CL:0000763!1.77e-55!112;CL:0000049!1.77e-55!112;CL:0000766!5.84e-52!76;CL:0002031!3.76e-44!124;CL:0000557!5.28e-44!71;CL:0000839!6.26e-43!70;CL:0002087!4.43e-42!119;CL:0002009!3.78e-41!65;CL:0002194!1.17e-39!63;CL:0000576!1.17e-39!63;CL:0000040!1.17e-39!63;CL:0000559!1.17e-39!63;CL:0002057!1.74e-36!42;CL:0000860!7.50e-33!45;CL:0000134!2.85e-20!358;CL:0002320!4.98e-19!365;CL:0000219!1.57e-15!390;CL:0000048!9.60e-13!430;CL:0000034!1.80e-12!444;CL:0000723!5.38e-12!436;CL:0000094!9.77e-10!8;CL:0000990!1.35e-07!8;CL:0000451!3.14e-07!10 | |ontology_enrichment_celltype=CL:0000037!1.31e-62!172;CL:0000566!1.31e-62!172;CL:0000988!1.15e-58!182;CL:0002032!2.79e-58!165;CL:0000837!2.79e-58!165;CL:0000738!1.03e-57!140;CL:0000763!1.77e-55!112;CL:0000049!1.77e-55!112;CL:0000766!5.84e-52!76;CL:0002031!3.76e-44!124;CL:0000557!5.28e-44!71;CL:0000839!6.26e-43!70;CL:0002087!4.43e-42!119;CL:0002009!3.78e-41!65;CL:0002194!1.17e-39!63;CL:0000576!1.17e-39!63;CL:0000040!1.17e-39!63;CL:0000559!1.17e-39!63;CL:0002057!1.74e-36!42;CL:0000860!7.50e-33!45;CL:0000134!2.85e-20!358;CL:0002320!4.98e-19!365;CL:0000219!1.57e-15!390;CL:0000048!9.60e-13!430;CL:0000034!1.80e-12!444;CL:0000723!5.38e-12!436;CL:0000094!9.77e-10!8;CL:0000990!1.35e-07!8;CL:0000451!3.14e-07!10 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.20e-68;33!CL:0002057;2.20e-68;33!CL:0000473;6.95e-50;39!CL:0000234;6.95e-50;39!CL:0000576;6.79e-45;48!CL:0000766;7.43e-36;69!CL:0000094;2.93e-20;8!CL:0000763;6.77e-20;100!CL:0000081;2.81e-14;11!CL:0000738;3.52e-13;136!CL:0002087;4.35e-13;104!CL:0000775;2.70e-09;3!CL:0000988;9.83e-09;177!CL:0000767;1.06e-07;3!CL:0000226;2.36e-07;3!CL:0000842;2.36e-07;3!CL:0002393;9.13e-07;6!CL:0002397;9.13e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,1.87e-90,72;CL:0000860,4.96e-73,42;CL:0002057,4.96e-73,42;CL:0000839,1.95e-69,66;CL:0002194,3.18e-69,59;CL:0000576,3.18e-69,59;CL:0000040,3.18e-69,59;CL:0000559,3.18e-69,59;CL:0000557,3.24e-68,67;CL:0000763,3.48e-67,108;CL:0000049,3.48e-67,108;CL:0002009,1.43e-66,61;CL:0000473,7.09e-66,48;CL:0000234,7.09e-66,48;CL:0000738,5.21e-56,136;CL:0000037,1.58e-52,168;CL:0000988,5.39e-49,177;CL:0002032,3.52e-48,161;CL:0000837,3.52e-48,161;CL:0002087,1.87e-43,115;CL:0002031,7.06e-41,120;CL:0000094,2.30e-20,8;CL:0000134,5.09e-16,354;CL:0002320,2.19e-15,361;CL:0000081,2.37e-14,11;CL:0000219,3.70e-13,386;CL:0000034,2.27e-11,441;CL:0000048,4.63e-11,427;CL:0000723,1.12e-10,433;CL:0000775,2.71e-09,3;CL:0000767,8.37e-08,3;CL:0000226,2.39e-07,3;CL:0000842,2.39e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;6.34e-53;42!CL:0000049;5.13e-17;108 | |||
|ontology_enrichment_disease=DOID:8692!6.84e-07!31 | |ontology_enrichment_disease=DOID:8692!6.84e-07!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.62e-53!102;UBERON:0003061!2.62e-53!102;UBERON:0002193!3.98e-49!112;UBERON:0002371!7.43e-42!80;UBERON:0001474!4.26e-37!86;UBERON:0002405!2.62e-29!115;UBERON:0004765!8.49e-28!101;UBERON:0001434!8.49e-28!101;UBERON:0002384!8.34e-18!375;UBERON:0003081!8.67e-15!216;UBERON:0002204!3.71e-11!167;UBERON:0000178!9.17e-11!15;UBERON:0000179!9.17e-11!15;UBERON:0000463!9.17e-11!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.86e-22;15!UBERON:0000179;8.86e-22;15!UBERON:0000463;8.86e-22;15!UBERON:0002390;3.57e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.06e-78,98;UBERON:0003061,1.06e-78,98;UBERON:0002193,5.59e-70,108;UBERON:0002371,2.36e-61,76;UBERON:0001474,6.36e-56,82;UBERON:0002405,4.57e-50,93;UBERON:0004765,8.44e-50,90;UBERON:0001434,1.61e-43,100;UBERON:0003081,4.07e-31,203;UBERON:0002204,5.37e-22,167;UBERON:0000178,8.51e-22,15;UBERON:0000179,8.51e-22,15;UBERON:0000463,8.51e-22,15;UBERON:0002384,1.60e-14,371;UBERON:0000926,1.77e-14,315;UBERON:0004120,1.77e-14,315;UBERON:0006603,1.77e-14,315 | |||
|phase1_expression=0.181678379270557,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764134057479513,0.903106483949403,0.629686250509434,5.90046415273356,2.68680578668049,1.54816123316076,0,0,0,0,0,1.46800219667424,6.64794490238253,3.20871115952227,6.2933152507597,0.447830948479849,0.32389366601898,0.257575567634187,2.76256653681173,3.02300754951048,2.91100873425379,3.95129362739664,3.28934310417461,3.71647645074124,5.17846306179871,2.81776777182011,6.62150243688039,10.6871161028352,5.16387746867061,1.35426486594342,5.08254316765033,5.73102915121476,8.31476892446813,11.6311879100943,9.62787081228281,8.95071976118658,2.30895910130701,1.99463657621632,4.26224750532694,8.12585868160035,5.6738522469114,8.09668923694247,3.76872997885115,4.17186334736161,5.86409880703815,10.8971910474006,11.4166067156145,10.7597211729901,0.845021145247767,0.850417199860174,1.46761051855863,2.80821577866238,3.60424542819615,4.66104201421532,0,0,0.365328307529268,0,0,0,1.28019066769952,0,1.14950487990897,1.32208974556972,0.954053754535364,0.569212969109448,0,0,1.32171328579026,1.12101712596307,0.790152254325231,0.196709770113833,0,1.02800749499755,0.334372990781356,0.651844533267181,0.473447805734733,1.94826728407911,0.557052284425868,0.294605907474837,0.221533894583621,0.270803863765016,0,0.780356085359269,0.164437904603676,0.552700035571697,0,0.296573126324121,0.267540828089713,1.04535523804977,0.113309342697566,0,0,0.759059076058509,0.637130828648193,0,0,0.301150238155546,0.383959833463255,0,0.710331756132051,0,0.80642697289893,0,0.868946423296794,0,0,0,0,0.50133791063589,0,0,0.486634870302636,0,0,0.087834785693126,0,0,0,3.8945687238562,4.52737316978095,3.72282289452822,0.476981248610684,0,0.74291500265913,0,0,0.347140501607594,0,0,0,0,0.258416759169329,0.35576626268671,0,0,0,0,0,0,0,0,0,0,0,0,25.038279312852,31.022421131866,0,0,0.379891534993739,0.397227542439656,0.286836620748814,0,0.560677600142307,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.984868024349589,0.468008530278475,0.743155811443641,0,0,0,0,0,0,1.47798971368783,0.704387472105808,1.24396869324463,1.00883967391873,0.6312121671319,0,0,0,0,0,0,0,0.112131084345361,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,1.77327684181734,0.215627574859517,0.77005821767849,0,0,0,0,0,35.9523371494648,41.8826042885635,51.3875236660684,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,1.86091223510599,3.23571301227925,1.06727557803444,0,0,0,0.248107807818777,0,0,0.128139149255701,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262248829918848,0,0,0,0,0,0,0.170093705276516,0,0,0,0,0,0,0,0.219259876645935,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0.10115778085555,0,0.31481234683064,1.3940745403212,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.578775534266688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.470719003883896,0,0,0,0,11.6712950123399,7.64637207142375,6.26611905891579,4.52640373369799,7.81588318863769,6.48473311192717,4.86028293514303,7.9312517629427,0,0,0,0.185803175125719,0,0.142283686696828,0,0.199579371432817,1.7235483311913,0.635020748171649,0,0.561594356226918,0,1.25343916618419,0,0,0.802940375518498,1.81619736471943,0.851692475380653,2.06103206853459,1.84344458585075,1.3420566473545,2.50273712567863,0.390776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.140669416410513,0,0.329607748453519,0,0,0.276283915531148,0,0,0,0,0,0,1.02314474045374,0.0986434056369336,4.7896618469388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.52581736317083,0,0,0,0,0,0,0.113942055847001,0,0,0,0.31900115973192,0,0.533034776018635,0,0.470940769185074,0.831058409500782,0,0.19606253431774,0.503464760927528,0,0.317873157960757,0,0,0,0,0,0,0,0,0.123563938946503,0,0,0,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0,0,0,0,0.899895566206002,0.77380195455795,0,0,0.157611414598396,0,0,1.43429871466276,0,0,0.662091970365432,0,0,0,0.326587360109409,0,0.082092520749339,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.854299300541557,0,0.828478110694391,0,0.197611631897944,0.243585196761792,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.149254802886874,0,0.554805861502613,0.189403005275089,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0.398095888698616,0,0,0,0,0,0,0,0,0,0.244736704506468,0,0,0,0,0,0,0,0,0,0.138258436151731,0.584580926518165,0.398594520940089,0.163565394255844,0,0.737318726261158,0,0,0,0.688859918643263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691403925334676,0,0.1359394659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| ||
|short_description=p6@SRGN | |short_description=p6@SRGN | ||
}} | }} |
Latest revision as of 00:16, 19 September 2015
Short description: | p6@SRGN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SRGN_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | -462bp_to_NM_002727, NR_036430, uc001joz.2_5end |
EntrezGene: | SRGN |
HGNC: | 9361 |
UniProt: | P10124 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.06e-78 | 98 |
blood island | 1.06e-78 | 98 |
hemolymphoid system | 5.59e-70 | 108 |
bone marrow | 2.36e-61 | 76 |
bone element | 6.36e-56 | 82 |
immune system | 4.57e-50 | 93 |
skeletal element | 8.44e-50 | 90 |
skeletal system | 1.61e-43 | 100 |
lateral plate mesoderm | 4.07e-31 | 203 |
musculoskeletal system | 5.37e-22 | 167 |
blood | 8.51e-22 | 15 |
haemolymphatic fluid | 8.51e-22 | 15 |
organism substance | 8.51e-22 | 15 |
connective tissue | 1.60e-14 | 371 |
mesoderm | 1.77e-14 | 315 |
mesoderm-derived structure | 1.77e-14 | 315 |
presumptive mesoderm | 1.77e-14 | 315 |