FFCP PHASE1:Hg19::chr10:64573464..64573482,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:64573464..64573482,- | |||
|description=CAGE_peak_at_chr10:64573464..64573482,- | |description=CAGE_peak_at_chr10:64573464..64573482,- | ||
|id=chr10:64573464..64573482,- | |id=chr10:64573464..64573482,- | ||
|ontology_enrichment_celltype=CL:0002194!6.85e-26!63;CL:0000576!6.85e-26!63;CL:0000040!6.85e-26!63;CL:0000559!6.85e-26!63;CL:0000766!1.53e-25!76;CL:0000839!1.57e-25!70;CL:0000557!5.26e-25!71;CL:0002009!9.39e-25!65;CL:0002057!1.54e-23!42;CL:0000860!2.18e-21!45;CL:0002087!2.19e-16!119;CL:0000738!1.42e-15!140;CL:0002031!2.07e-15!124;CL:0000763!1.53e-13!112;CL:0000049!1.53e-13!112;CL:0000988!5.06e-11!182;CL:0000037!3.09e-10!172;CL:0000566!3.09e-10!172;CL:0002032!7.17e-10!165;CL:0000837!7.17e-10!165;CL:0000080!3.66e-07!6 | |ontology_enrichment_celltype=CL:0002194!6.85e-26!63;CL:0000576!6.85e-26!63;CL:0000040!6.85e-26!63;CL:0000559!6.85e-26!63;CL:0000766!1.53e-25!76;CL:0000839!1.57e-25!70;CL:0000557!5.26e-25!71;CL:0002009!9.39e-25!65;CL:0002057!1.54e-23!42;CL:0000860!2.18e-21!45;CL:0002087!2.19e-16!119;CL:0000738!1.42e-15!140;CL:0002031!2.07e-15!124;CL:0000763!1.53e-13!112;CL:0000049!1.53e-13!112;CL:0000988!5.06e-11!182;CL:0000037!3.09e-10!172;CL:0000566!3.09e-10!172;CL:0002032!7.17e-10!165;CL:0000837!7.17e-10!165;CL:0000080!3.66e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.05e-43;33!CL:0002057;1.05e-43;33!CL:0000473;8.32e-34;39!CL:0000234;8.32e-34;39!CL:0000576;5.26e-21;48!CL:0000766;5.44e-14;69!CL:0002568;1.42e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,9.81e-37,42;CL:0002057,9.81e-37,42;CL:0000473,1.63e-36,48;CL:0000234,1.63e-36,48;CL:0002194,1.83e-36,59;CL:0000576,1.83e-36,59;CL:0000040,1.83e-36,59;CL:0000559,1.83e-36,59;CL:0000839,2.44e-36,66;CL:0000557,9.38e-36,67;CL:0002009,3.51e-35,61;CL:0000766,4.54e-33,72;CL:0000763,5.38e-21,108;CL:0000049,5.38e-21,108;CL:0002031,1.45e-18,120;CL:0002087,2.98e-17,115;CL:0000738,5.55e-16,136;CL:0000988,1.31e-14,177;CL:0002032,5.75e-13,161;CL:0000837,5.75e-13,161;CL:0000037,2.78e-12,168;CL:0002568,1.78e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002057;1.18e-30;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.31e-25!102;UBERON:0003061!1.31e-25!102;UBERON:0002193!4.26e-23!112;UBERON:0002371!3.26e-22!80;UBERON:0001474!7.65e-20!86;UBERON:0004765!3.23e-16!101;UBERON:0001434!3.23e-16!101;UBERON:0002405!2.07e-15!115;UBERON:0003081!5.91e-09!216;UBERON:0002204!2.71e-08!167 | |ontology_enrichment_uberon=UBERON:0002390!1.31e-25!102;UBERON:0003061!1.31e-25!102;UBERON:0002193!4.26e-23!112;UBERON:0002371!3.26e-22!80;UBERON:0001474!7.65e-20!86;UBERON:0004765!3.23e-16!101;UBERON:0001434!3.23e-16!101;UBERON:0002405!2.07e-15!115;UBERON:0003081!5.91e-09!216;UBERON:0002204!2.71e-08!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0007029;5.70e-09;1!UBERON:0002171;1.42e-08;1!UBERON:0006518;1.42e-08;1!UBERON:0008949;1.42e-08;1!UBERON:0000101;1.42e-08;1!UBERON:0002167;1.42e-08;1!UBERON:0002331;2.50e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.58e-31,76;UBERON:0002390,2.64e-29,98;UBERON:0003061,2.64e-29,98;UBERON:0001474,1.14e-28,82;UBERON:0002193,2.85e-26,108;UBERON:0004765,7.67e-26,90;UBERON:0002405,6.62e-25,93;UBERON:0001434,6.16e-23,100;UBERON:0003081,1.11e-13,203;UBERON:0002204,2.24e-12,167;UBERON:0007029,4.89e-09,1;UBERON:0002171,1.22e-08,1;UBERON:0006518,1.22e-08,1;UBERON:0008949,1.22e-08,1;UBERON:0000101,1.22e-08,1;UBERON:0002167,1.22e-08,1;UBERON:0000926,2.15e-07,315;UBERON:0004120,2.15e-07,315;UBERON:0006603,2.15e-07,315;UBERON:0002331,2.69e-07,10;UBERON:0000358,2.69e-07,10;UBERON:0000307,2.69e-07,10;UBERON:0000091,2.69e-07,10;UBERON:0000087,2.69e-07,10;UBERON:0007010,2.69e-07,10;UBERON:0007806,2.69e-07,10;UBERON:0008780,2.69e-07,10;UBERON:0005728,2.69e-07,10 | |||
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|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229240217243854,0.328402357799783,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0.32389366601898,0,0.145398238779565,1.13362783106643,0,1.85943229524548,4.11167888021826,1.54853185447552,3.45230870786581,2.81776777182011,1.89185783910868,0.689491361473237,1.93645405075148,2.70852973188684,0.752969358170419,1.36453075028923,2.02251136000576,0.612167784741805,0,0.639337125799041,0.989553900560148,0.797854630486527,0.426224750532694,0,0,0,5.7787193009051,3.65038042894141,3.25783267057675,0.605399502633369,1.10483290796269,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.378139268656271,0,0,0.392937226493138,0,0,0.649094787309367,1.39303789839414,1.06366368415092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0.148631162288728,0,0,0,0,0,0,6.89728533054321,0,0,0,0.37872730027914,0,0,0,0,0,0,0,0,0,0,1.16344544182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.43335757932127,0,0,0,0,0,0,0,0,0,0,0.508189248444927,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0.300946099727719,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.178064071293475,0,0,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,1.53403023753232,0.123084805461069,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0.219385397153973,0,0.139423744278603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0.141353071433941,0,0,0,0,6.52346483097368,3.58335422944858,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0,0,0.0870592065804026,0.698906672968121,0,0,0,0,0.0969890164884194,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0.942776138467182,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0607495566580247,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.471612915298998,1.65695622138878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0.570930667089935,0,0,0,0.298509605773748,0,0,0.189403005275089,0,0,0,0.302461847526478,0.15543720058278,0,0,0,0,0,0.265841714557995,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0.471797825567689,0,0,0,8.17976044109414,0,0,0.157723490002507,0,0,0,0.128458450192919,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147856086217045,0.0675375846183947,0,0,0,0,0,0.992422356778588,0.175871244359621,0,0,0,0,0,0,0.230467975111559,0,0,0.0657727735628491,0,0,0.078493092850514,0,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0.22910686854405,0,0,0.111855431797792,0,0.121917924982269,0,0.102662806856247,0,3.88568794447312,0,0,0.118920090777569,0,0,0,0.154348316215889,0,0,0,0.235676547101626,0,0,0.4226557275834,0,0,0.257831551894309,0.199882311849858,0,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0.0645889098360061,0,0,0,0.808468755832877,0,0,0.0673520530145875,0,0,0,0,1.9307228228694,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:64573464..64573482,- | |short_description=p@chr10:64573464..64573482,- | ||
}} | }} |
Latest revision as of 14:43, 23 July 2015
Short description: | p@chr10:64573464..64573482, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:64573464..64573482, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 9.81e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.81e-37 | 42 |
defensive cell | 1.63e-36 | 48 |
phagocyte | 1.63e-36 | 48 |
monopoietic cell | 1.83e-36 | 59 |
monocyte | 1.83e-36 | 59 |
monoblast | 1.83e-36 | 59 |
promonocyte | 1.83e-36 | 59 |
myeloid lineage restricted progenitor cell | 2.44e-36 | 66 |
granulocyte monocyte progenitor cell | 9.38e-36 | 67 |
macrophage dendritic cell progenitor | 3.51e-35 | 61 |
myeloid leukocyte | 4.54e-33 | 72 |
myeloid cell | 5.38e-21 | 108 |
common myeloid progenitor | 5.38e-21 | 108 |
hematopoietic lineage restricted progenitor cell | 1.45e-18 | 120 |
nongranular leukocyte | 2.98e-17 | 115 |
leukocyte | 5.55e-16 | 136 |
hematopoietic cell | 1.31e-14 | 177 |
hematopoietic oligopotent progenitor cell | 5.75e-13 | 161 |
hematopoietic multipotent progenitor cell | 5.75e-13 | 161 |
hematopoietic stem cell | 2.78e-12 | 168 |
mesenchymal stem cell of Wharton's jelly | 1.78e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.58e-31 | 76 |
hematopoietic system | 2.64e-29 | 98 |
blood island | 2.64e-29 | 98 |
bone element | 1.14e-28 | 82 |
hemolymphoid system | 2.85e-26 | 108 |
skeletal element | 7.67e-26 | 90 |
immune system | 6.62e-25 | 93 |
skeletal system | 6.16e-23 | 100 |
lateral plate mesoderm | 1.11e-13 | 203 |
musculoskeletal system | 2.24e-12 | 167 |
surface | 4.89e-09 | 1 |
lower lobe of right lung | 1.22e-08 | 1 |
right lung lobe | 1.22e-08 | 1 |
lower lobe of lung | 1.22e-08 | 1 |
lobe of lung | 1.22e-08 | 1 |
right lung | 1.22e-08 | 1 |
mesoderm | 2.15e-07 | 315 |
mesoderm-derived structure | 2.15e-07 | 315 |
presumptive mesoderm | 2.15e-07 | 315 |
umbilical cord | 2.69e-07 | 10 |
blastocyst | 2.69e-07 | 10 |
blastula | 2.69e-07 | 10 |
bilaminar disc | 2.69e-07 | 10 |
inner cell mass | 2.69e-07 | 10 |
cleaving embryo | 2.69e-07 | 10 |
connecting stalk | 2.69e-07 | 10 |
inner cell mass derived epiblast | 2.69e-07 | 10 |
extraembryonic mesoderm | 2.69e-07 | 10 |