FFCP PHASE1:Hg19::chr14:62193465..62193490,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3091 | |EntrezGene=3091 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4910 | |HGNC=4910 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=326bp_to_ENST00000556237_5end | |association_with_transcript=326bp_to_ENST00000556237_5end | ||
|cluster_id=chr14:62193465..62193490,+ | |||
|coexpression_cluster_id=C832 | |||
|description=CAGE_peak_7_at_HIF1A_5end | |description=CAGE_peak_7_at_HIF1A_5end | ||
|id=chr14:62193465..62193490,+ | |id=chr14:62193465..62193490,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.21e-15!42;CL:0000860!4.03e-15!45;CL:0000766!3.51e-13!76;CL:0000048!5.78e-12!430;CL:0002194!3.91e-11!63;CL:0000576!3.91e-11!63;CL:0000040!3.91e-11!63;CL:0000559!3.91e-11!63;CL:0000548!5.30e-11!679;CL:0000004!5.30e-11!679;CL:0000255!5.30e-11!679;CL:0000723!7.97e-11!436;CL:0000012!8.32e-11!682;CL:0000034!1.26e-10!444;CL:0000557!2.56e-10!71;CL:0002009!3.03e-10!65;CL:0000839!8.42e-10!70;CL:0000144!3.75e-09!625;CL:0002320!1.18e-08!365;CL:0002371!2.07e-08!591;CL:0000134!4.56e-08!358;CL:0000003!7.39e-08!722;CL:0000063!8.46e-07!578 | |ontology_enrichment_celltype=CL:0002057!1.21e-15!42;CL:0000860!4.03e-15!45;CL:0000766!3.51e-13!76;CL:0000048!5.78e-12!430;CL:0002194!3.91e-11!63;CL:0000576!3.91e-11!63;CL:0000040!3.91e-11!63;CL:0000559!3.91e-11!63;CL:0000548!5.30e-11!679;CL:0000004!5.30e-11!679;CL:0000255!5.30e-11!679;CL:0000723!7.97e-11!436;CL:0000012!8.32e-11!682;CL:0000034!1.26e-10!444;CL:0000557!2.56e-10!71;CL:0002009!3.03e-10!65;CL:0000839!8.42e-10!70;CL:0000144!3.75e-09!625;CL:0002320!1.18e-08!365;CL:0002371!2.07e-08!591;CL:0000134!4.56e-08!358;CL:0000003!7.39e-08!722;CL:0000063!8.46e-07!578 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.65e-20;33!CL:0002057;8.65e-20;33!CL:0000473;4.41e-15;39!CL:0000234;4.41e-15;39!CL:0000576;7.09e-11;48!CL:0000766;1.30e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.35e-20,42;CL:0002057,1.35e-20,42;CL:0000473,1.75e-19,48;CL:0000234,1.75e-19,48;CL:0000048,8.44e-18,427;CL:0000766,2.39e-17,72;CL:0000723,6.48e-17,433;CL:0000034,2.64e-16,441;CL:0002194,5.60e-15,59;CL:0000576,5.60e-15,59;CL:0000040,5.60e-15,59;CL:0000559,5.60e-15,59;CL:0002009,4.53e-14,61;CL:0002320,1.10e-13,361;CL:0000557,1.51e-13,67;CL:0000839,3.74e-13,66;CL:0000134,1.03e-12,354;CL:0000219,8.80e-10,386;CL:0000763,2.05e-07,108;CL:0000049,2.05e-07,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.90e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.34e-11!167;UBERON:0002371!5.62e-10!80;UBERON:0004765!6.53e-09!101;UBERON:0001434!6.53e-09!101;UBERON:0002384!6.69e-09!375;UBERON:0001474!1.00e-08!86 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002204,2.51e-15,167;UBERON:0002384,3.99e-14,371;UBERON:0002371,1.13e-13,76;UBERON:0004765,1.20e-13,90;UBERON:0001474,1.79e-12,82;UBERON:0001434,5.33e-12,100;UBERON:0002405,1.99e-10,93;UBERON:0000926,7.28e-10,315;UBERON:0004120,7.28e-10,315;UBERON:0006603,7.28e-10,315;UBERON:0002390,6.12e-09,98;UBERON:0003061,6.12e-09,98;UBERON:0002193,2.39e-08,108 | |||
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| ||
|short_description=p7@HIF1A | |short_description=p7@HIF1A | ||
}} | }} |
Latest revision as of 23:27, 24 September 2015
Short description: | p7@HIF1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_HIF1A_5end |
Coexpression cluster: | C832_Neutrophils_CD14_Preadipocyte_Olfactory_tenocyte_mixed_Adipocyte |
Association with transcript: | 326bp_to_ENST00000556237_5end |
EntrezGene: | HIF1A |
HGNC: | 4910 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.35e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.35e-20 | 42 |
defensive cell | 1.75e-19 | 48 |
phagocyte | 1.75e-19 | 48 |
multi fate stem cell | 8.44e-18 | 427 |
myeloid leukocyte | 2.39e-17 | 72 |
somatic stem cell | 6.48e-17 | 433 |
stem cell | 2.64e-16 | 441 |
monopoietic cell | 5.60e-15 | 59 |
monocyte | 5.60e-15 | 59 |
monoblast | 5.60e-15 | 59 |
promonocyte | 5.60e-15 | 59 |
macrophage dendritic cell progenitor | 4.53e-14 | 61 |
connective tissue cell | 1.10e-13 | 361 |
granulocyte monocyte progenitor cell | 1.51e-13 | 67 |
myeloid lineage restricted progenitor cell | 3.74e-13 | 66 |
mesenchymal cell | 1.03e-12 | 354 |
motile cell | 8.80e-10 | 386 |
myeloid cell | 2.05e-07 | 108 |
common myeloid progenitor | 2.05e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system | 2.51e-15 | 167 |
connective tissue | 3.99e-14 | 371 |
bone marrow | 1.13e-13 | 76 |
skeletal element | 1.20e-13 | 90 |
bone element | 1.79e-12 | 82 |
skeletal system | 5.33e-12 | 100 |
immune system | 1.99e-10 | 93 |
mesoderm | 7.28e-10 | 315 |
mesoderm-derived structure | 7.28e-10 | 315 |
presumptive mesoderm | 7.28e-10 | 315 |
hematopoietic system | 6.12e-09 | 98 |
blood island | 6.12e-09 | 98 |
hemolymphoid system | 2.39e-08 | 108 |