FFCP PHASE1:Hg19::chr10:5726677..5726706,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54906 | |EntrezGene=54906 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23484 | |HGNC=23484 | ||
|TSSclassifier=strong | |||
|UniProt=Q5VWN6 | |UniProt=Q5VWN6 | ||
|association_with_transcript=-94bp_to_ENST00000328090,ENST00000442808,NM_017782,uc001iij.2_5end | |association_with_transcript=-94bp_to_ENST00000328090,ENST00000442808,NM_017782,uc001iij.2_5end | ||
|cluster_id=chr10:5726677..5726706,+ | |||
|description=CAGE_peak_2_at_FAM208B_5end | |description=CAGE_peak_2_at_FAM208B_5end | ||
|id=chr10:5726677..5726706,+ | |id=chr10:5726677..5726706,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;8.45e-07;7!CL:0000586;8.45e-07;7 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;5.53e-08;82 | |||
|ontology_enrichment_disease=DOID:0050687!1.02e-10!143;DOID:162!8.97e-10!235;DOID:14566!1.38e-09!239;DOID:305!7.34e-09!106 | |ontology_enrichment_disease=DOID:0050687!1.02e-10!143;DOID:162!8.97e-10!235;DOID:14566!1.38e-09!239;DOID:305!7.34e-09!106 | ||
|ontology_enrichment_disease_v019=DOID:3095;5.65e-09;22!DOID:2994;5.65e-09;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,4.61e-09,22;DOID:2994,4.61e-09,22;DOID:0050687,2.44e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0001049!6.46e-16!57;UBERON:0005068!6.46e-16!57;UBERON:0006241!6.46e-16!57;UBERON:0007135!6.46e-16!57;UBERON:0000073!1.83e-14!94;UBERON:0001016!1.83e-14!94;UBERON:0007023!3.25e-14!115;UBERON:0001017!1.56e-13!82;UBERON:0000955!9.00e-13!69;UBERON:0006238!9.00e-13!69;UBERON:0005743!1.10e-12!86;UBERON:0003080!1.49e-12!42;UBERON:0002780!2.59e-12!41;UBERON:0001890!2.59e-12!41;UBERON:0006240!2.59e-12!41;UBERON:0002616!3.24e-12!59;UBERON:0002346!1.37e-10!90;UBERON:0003075!2.47e-10!86;UBERON:0007284!2.47e-10!86;UBERON:0001893!2.64e-09!34;UBERON:0002020!3.31e-09!34;UBERON:0003528!3.31e-09!34;UBERON:0002791!4.65e-09!33;UBERON:0000153!1.28e-08!129;UBERON:0007811!1.28e-08!129;UBERON:0001869!1.48e-08!32;UBERON:0000033!1.51e-08!123;UBERON:0000924!1.83e-08!173;UBERON:0006601!1.83e-08!173;UBERON:0004121!3.51e-08!169;UBERON:0003056!3.79e-08!61;UBERON:0002619!4.12e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;9.76e-10;41!UBERON:0001890;9.76e-10;41!UBERON:0000073;2.83e-09;53!UBERON:0002616;2.83e-09;53!UBERON:0001016;9.09e-08;83!UBERON:0002791;2.54e-07;32!UBERON:0001893;3.19e-07;34!UBERON:0001869;3.85e-07;32!UBERON:0003528;3.89e-07;34!UBERON:0002020;3.89e-07;34!UBERON:0002619;8.65e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.63e-19,89;UBERON:0001049,2.12e-18,56;UBERON:0005068,2.12e-18,56;UBERON:0006241,2.12e-18,56;UBERON:0007135,2.12e-18,56;UBERON:0001017,5.22e-17,81;UBERON:0000073,9.12e-17,53;UBERON:0002616,9.12e-17,53;UBERON:0000955,5.76e-16,68;UBERON:0006238,5.76e-16,68;UBERON:0007023,1.99e-14,114;UBERON:0002780,1.02e-13,41;UBERON:0001890,1.02e-13,41;UBERON:0003080,1.02e-13,41;UBERON:0006240,1.02e-13,41;UBERON:0002346,2.68e-12,86;UBERON:0003075,3.86e-12,82;UBERON:0007284,3.86e-12,82;UBERON:0004121,4.81e-11,171;UBERON:0000924,4.81e-11,171;UBERON:0006601,4.81e-11,171;UBERON:0001893,7.98e-10,34;UBERON:0003528,1.05e-09,34;UBERON:0002020,1.05e-09,34;UBERON:0010371,2.43e-09,104;UBERON:0003056,4.33e-09,61;UBERON:0002791,5.22e-09,32;UBERON:0001869,7.29e-09,32;UBERON:0010314,7.56e-09,132;UBERON:0011216,2.14e-08,223;UBERON:0002619,8.67e-08,22;UBERON:0001950,5.43e-07,20 | |||
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| ||
|short_description=p2@FAM208B | |short_description=p2@FAM208B | ||
}} | }} |
Latest revision as of 13:43, 18 September 2015
Short description: | p2@FAM208B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_FAM208B_5end |
Coexpression cluster: | NA |
Association with transcript: | -94bp_to_ENST00000328090, ENST00000442808, NM_017782, uc001iij.2_5end |
EntrezGene: | FAM208B |
HGNC: | 23484 |
UniProt: | Q5VWN6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nervous system | 5.63e-19 | 89 |
neural tube | 2.12e-18 | 56 |
neural rod | 2.12e-18 | 56 |
future spinal cord | 2.12e-18 | 56 |
neural keel | 2.12e-18 | 56 |
central nervous system | 5.22e-17 | 81 |
regional part of nervous system | 9.12e-17 | 53 |
regional part of brain | 9.12e-17 | 53 |
brain | 5.76e-16 | 68 |
future brain | 5.76e-16 | 68 |
adult organism | 1.99e-14 | 114 |
regional part of forebrain | 1.02e-13 | 41 |
forebrain | 1.02e-13 | 41 |
anterior neural tube | 1.02e-13 | 41 |
future forebrain | 1.02e-13 | 41 |
neurectoderm | 2.68e-12 | 86 |
neural plate | 3.86e-12 | 82 |
presumptive neural plate | 3.86e-12 | 82 |
ectoderm-derived structure | 4.81e-11 | 171 |
ectoderm | 4.81e-11 | 171 |
presumptive ectoderm | 4.81e-11 | 171 |
telencephalon | 7.98e-10 | 34 |
brain grey matter | 1.05e-09 | 34 |
gray matter | 1.05e-09 | 34 |
ecto-epithelium | 2.43e-09 | 104 |
pre-chordal neural plate | 4.33e-09 | 61 |
regional part of telencephalon | 5.22e-09 | 32 |
cerebral hemisphere | 7.29e-09 | 32 |
structure with developmental contribution from neural crest | 7.56e-09 | 132 |
organ system subdivision | 2.14e-08 | 223 |
regional part of cerebral cortex | 8.67e-08 | 22 |
neocortex | 5.43e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 4.61e-09 | 22 |
germ cell cancer | 4.61e-09 | 22 |
cell type cancer | 2.44e-08 | 143 |