FFCP PHASE1:Mm9::chr6:117124293..117124310,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=134 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:117124293..117124310,- | |||
|description=CAGE_peak_at_chr6:117124293..117124310,- | |description=CAGE_peak_at_chr6:117124293..117124310,- | ||
|id=chr6:117124293..117124310,- | |id=chr6:117124293..117124310,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000192,4.86e-20,3;CL:0000359,4.86e-20,3;CL:0002539,4.86e-20,3;CL:0000514,4.86e-20,3;CL:0000680,1.49e-10,6;CL:0000187,1.49e-10,6;CL:0000056,1.49e-10,6;CL:0000222,3.47e-09,7;CL:0000355,2.36e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001135,4.86e-20,3;UBERON:0004237,4.86e-20,3;UBERON:0004695,4.86e-20,3;UBERON:0002111,4.86e-20,3;UBERON:0004178,4.86e-20,3;UBERON:0000947,2.61e-15,4;UBERON:0001637,2.61e-15,4;UBERON:0004573,2.61e-15,4;UBERON:0003509,2.61e-15,4;UBERON:0004571,2.61e-15,4;UBERON:0010191,2.61e-15,4;UBERON:0004572,2.61e-15,4;UBERON:0000055,1.85e-12,5;UBERON:0007500,1.85e-12,5;UBERON:0001981,1.85e-12,5;UBERON:0002049,1.85e-12,5;UBERON:0007798,1.85e-12,5;UBERON:0004537,1.85e-12,5;UBERON:0006965,1.85e-12,5;UBERON:0001134,2.36e-07,9;UBERON:0002036,2.36e-07,9;UBERON:0002385,2.36e-07,9;UBERON:0000486,2.36e-07,9;UBERON:0007503,2.36e-07,9;UBERON:0001015,2.36e-07,9;UBERON:0002329,2.36e-07,9;UBERON:0003082,2.36e-07,9;UBERON:0003059,2.36e-07,9;UBERON:0007282,2.36e-07,9;UBERON:0004290,2.36e-07,9;UBERON:0009618,2.36e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,1.21652317463417,2.56965453026354,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,13.4639954836666,19.2241643406123,20.8470348961101,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0.295220295959204,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0.388902376688095,0.645799117388655,0.168956125490778,0.117357238645754,0,0,0,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.288635524920988,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0.365855945745545,0,0,0,0,0,0,0.309873682371932,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,1.21652317463417,2.56965453026354,0.782391344348039,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0.633831403506179,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0.182975287204819,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,13.4639954836666,19.2241643406123,20.8470348961101,0,1.28326477414318,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0.323533699894818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.497627882440372,0,0,0,0,0,0,0,0,0.187403449119458,0,0,0,0,0,0.278047249225598,0,0.411564272815887,0.199034266818493,0,0,0,0,0,0,0.23674473558521,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0,0,0,0,0,0.213288250535234,0,0,0,0.22237804384487,0,0,0,0.251335208800269,0,0,0,0,0.199141273254367,0,0,0,0.203651327845314,0.193952487167626,0.210407459670956,0,0.295220295959204,0,0.246794327843601,0.592905254174298,0,0,0,0,0,0,0,0.324270453550071,0,0,0.372140947668503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0.178065603667255,0.162886959353576,0,0,0,0,0,0,0.307435147943927,0,0.363533729477506,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0,0,0,0,0,0,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0.134864346384821,0.165306911450672,0,0,0,0,0,0,0.388902376688095,0.645799117388655,0.168956125490778,0.117357238645754,0,0,0,0,0,0.405450430580328,0.102710957164827,0.129920822977795,0.179026695667481,0.198681354781265,0,0.147689527174577,0.100966449948148,0,0.100826185136841,0,0.288635524920988,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0,0,0,0,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0.365855945745545,0,0,0,0,0,0,0.309873682371932,0,0,0,0,0,0,0 | ||
|short_description=p@chr6:117124293..117124310,- | |short_description=p@chr6:117124293..117124310,- | ||
}} | }} |
Latest revision as of 23:39, 4 August 2015
Short description: | p@chr6:117124293..117124310, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:117124293..117124310, - |
Coexpression cluster: | MCL_coexpression_mm9:134 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell | 4.86e-20 | 3 |
vascular associated smooth muscle cell | 4.86e-20 | 3 |
aortic smooth muscle cell | 4.86e-20 | 3 |
smooth muscle myoblast | 4.86e-20 | 3 |
muscle precursor cell | 1.49e-10 | 6 |
muscle cell | 1.49e-10 | 6 |
myoblast | 1.49e-10 | 6 |
mesodermal cell | 3.47e-09 | 7 |
multi-potent skeletal muscle stem cell | 2.36e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
smooth muscle tissue | 4.86e-20 | 3 |
blood vessel smooth muscle | 4.86e-20 | 3 |
arterial system smooth muscle | 4.86e-20 | 3 |
artery smooth muscle tissue | 4.86e-20 | 3 |
aorta smooth muscle tissue | 4.86e-20 | 3 |
aorta | 2.61e-15 | 4 |
artery | 2.61e-15 | 4 |
systemic artery | 2.61e-15 | 4 |
arterial blood vessel | 2.61e-15 | 4 |
systemic arterial system | 2.61e-15 | 4 |
aortic system | 2.61e-15 | 4 |
arterial system | 2.61e-15 | 4 |
vessel | 1.85e-12 | 5 |
epithelial tube open at both ends | 1.85e-12 | 5 |
blood vessel | 1.85e-12 | 5 |
vasculature | 1.85e-12 | 5 |
vascular system | 1.85e-12 | 5 |
blood vasculature | 1.85e-12 | 5 |
vascular cord | 1.85e-12 | 5 |
skeletal muscle tissue | 2.36e-07 | 9 |
striated muscle tissue | 2.36e-07 | 9 |
muscle tissue | 2.36e-07 | 9 |
multilaminar epithelium | 2.36e-07 | 9 |
epithelial vesicle | 2.36e-07 | 9 |
musculature | 2.36e-07 | 9 |
somite | 2.36e-07 | 9 |
myotome | 2.36e-07 | 9 |
presomitic mesoderm | 2.36e-07 | 9 |
presumptive segmental plate | 2.36e-07 | 9 |
dermomyotome | 2.36e-07 | 9 |
trunk paraxial mesoderm | 2.36e-07 | 9 |