FFCP PHASE1:Hg19::chr10:5535718..5535735,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:5535718..5535735,- | |||
|coexpression_cluster_id=C83 | |||
|description=CAGE_peak_at_chr10:5535718..5535735,- | |description=CAGE_peak_at_chr10:5535718..5535735,- | ||
|id=chr10:5535718..5535735,- | |id=chr10:5535718..5535735,- | ||
|ontology_enrichment_celltype=CL:0002541!3.32e-32!3;CL:0000039!1.76e-14!7;CL:0000586!1.76e-14!7;CL:0002563!1.82e-11!4 | |ontology_enrichment_celltype=CL:0002541!3.32e-32!3;CL:0000039!1.76e-14!7;CL:0000586!1.76e-14!7;CL:0002563!1.82e-11!4 | ||
|ontology_enrichment_celltype_v019=CL:0002541;1.43e-21;3!CL:0000039;1.51e-20;7!CL:0000586;1.51e-20;7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002541,1.43e-21,3;CL:0000039,1.56e-20,7;CL:0000586,1.56e-20,7 | |||
|ontology_enrichment_development_v019=UBERON:0003124;1.53e-16;1!UBERON:0008425;2.43e-16;1 | |||
|ontology_enrichment_disease=DOID:1799!3.27e-12!1;DOID:10165!3.27e-12!1;DOID:1798!3.27e-12!1;DOID:5093!1.55e-11!4;DOID:1612!1.55e-11!4 | |||
|ontology_enrichment_disease_v019=DOID:1799;6.47e-17;1!DOID:10165;6.47e-17;1!DOID:1798;6.47e-17;1!DOID:5093;3.73e-16;4!DOID:1612;3.73e-16;4!DOID:3095;6.16e-07;22!DOID:2994;6.16e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:1799,6.47e-17,1;DOID:10165,6.47e-17,1;DOID:1798,6.47e-17,1;DOID:5093,3.87e-16,4;DOID:1612,3.87e-16,4;DOID:3095,6.22e-07,22;DOID:2994,6.22e-07,22 | |||
|ontology_enrichment_uberon=UBERON:0000476!3.32e-32!3;UBERON:0000920!3.32e-32!3;UBERON:0003124!2.19e-24!7;UBERON:0005631!1.08e-18!14;UBERON:0000158!1.08e-18!14;UBERON:0002171!1.32e-11!1;UBERON:0006518!1.32e-11!1;UBERON:0008949!1.32e-11!1;UBERON:0000101!1.32e-11!1;UBERON:0002167!1.32e-11!1;UBERON:0001242!1.82e-11!4;UBERON:0001262!1.82e-11!4;UBERON:0004786!1.82e-11!4;UBERON:0004808!1.82e-11!4;UBERON:0001277!1.82e-11!4;UBERON:0000478!7.05e-11!24;UBERON:0003350!2.36e-09!5;UBERON:0000060!2.23e-08!12;UBERON:0004923!2.29e-08!57 | |ontology_enrichment_uberon=UBERON:0000476!3.32e-32!3;UBERON:0000920!3.32e-32!3;UBERON:0003124!2.19e-24!7;UBERON:0005631!1.08e-18!14;UBERON:0000158!1.08e-18!14;UBERON:0002171!1.32e-11!1;UBERON:0006518!1.32e-11!1;UBERON:0008949!1.32e-11!1;UBERON:0000101!1.32e-11!1;UBERON:0002167!1.32e-11!1;UBERON:0001242!1.82e-11!4;UBERON:0001262!1.82e-11!4;UBERON:0004786!1.82e-11!4;UBERON:0004808!1.82e-11!4;UBERON:0001277!1.82e-11!4;UBERON:0000478!7.05e-11!24;UBERON:0003350!2.36e-09!5;UBERON:0000060!2.23e-08!12;UBERON:0004923!2.29e-08!57 | ||
|ontology_enrichment_uberon_v019=UBERON:0003124;1.43e-21;3!UBERON:0000920;1.43e-21;3!UBERON:0005631;4.01e-07;10!UBERON:0000158;4.01e-07;10!UBERON:0000310;5.19e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000920,1.43e-21,3;UBERON:0003124,2.17e-20,7;UBERON:0005631,1.62e-10,14;UBERON:0000158,1.62e-10,14;UBERON:0000310,5.26e-07,10 | |||
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|short_description=p@chr10:5535718..5535735,- | |short_description=p@chr10:5535718..5535735,- | ||
}} | }} |
Latest revision as of 14:12, 23 July 2015
Short description: | p@chr10:5535718..5535735, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:5535718..5535735, - |
Coexpression cluster: | C83_choriocarcinoma_pancreatic_placenta_chorionic_HES3GFP_testicular_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chorionic membrane mesenchymal stem cell | 1.43e-21 | 3 |
germ line cell | 1.56e-20 | 7 |
germ cell | 1.56e-20 | 7 |
Ontology term | p-value | n |
---|---|---|
egg chorion | 1.43e-21 | 3 |
chorion | 2.17e-20 | 7 |
extraembryonic membrane | 1.62e-10 | 14 |
membranous layer | 1.62e-10 | 14 |
breast | 5.26e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
islet cell tumor | 6.47e-17 | 1 |
endocrine pancreas cancer | 6.47e-17 | 1 |
pancreatic endocrine carcinoma | 6.47e-17 | 1 |
thoracic cancer | 3.87e-16 | 4 |
breast cancer | 3.87e-16 | 4 |
germ cell and embryonal cancer | 6.22e-07 | 22 |
germ cell cancer | 6.22e-07 | 22 |