FFCP PHASE1:Hg19::chr10:51565188..51565236,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=8031 | |EntrezGene=8031 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7671 | |HGNC=7671 | ||
|TSSclassifier=strong | |||
|UniProt=C9J6E0,Q13772,B4DZ85 | |UniProt=C9J6E0,Q13772,B4DZ85 | ||
|association_with_transcript=0bp_to_ENST00000330923,ENST00000374087,ENST00000414907,ENST00000430396,ENST00000498586_5end | |association_with_transcript=0bp_to_ENST00000330923,ENST00000374087,ENST00000414907,ENST00000430396,ENST00000498586_5end | ||
|cluster_id=chr10:51565188..51565236,+ | |||
|description=CAGE_peak_1_at_NCOA4_5end | |description=CAGE_peak_1_at_NCOA4_5end | ||
|id=chr10:51565188..51565236,+ | |id=chr10:51565188..51565236,+ | ||
|ontology_enrichment_celltype=CL:0000766!2.96e-21!76;CL:0000839!3.54e-20!70;CL:0000557!3.11e-18!71;CL:0000763!3.23e-17!112;CL:0000049!3.23e-17!112;CL:0002009!8.44e-17!65;CL:0002194!1.07e-16!63;CL:0000576!1.07e-16!63;CL:0000040!1.07e-16!63;CL:0000559!1.07e-16!63;CL:0002057!2.34e-15!42;CL:0000860!6.55e-14!45;CL:0000738!7.00e-12!140;CL:0002031!1.99e-11!124;CL:0000037!3.32e-11!172;CL:0000566!3.32e-11!172;CL:0002032!3.42e-11!165;CL:0000837!3.42e-11!165;CL:0002320!2.19e-10!365;CL:0000134!5.39e-10!358;CL:0000048!2.93e-09!430;CL:0000723!7.74e-09!436;CL:0000988!1.46e-08!182;CL:0002087!1.95e-08!119;CL:0000034!2.00e-08!444 | |ontology_enrichment_celltype=CL:0000766!2.96e-21!76;CL:0000839!3.54e-20!70;CL:0000557!3.11e-18!71;CL:0000763!3.23e-17!112;CL:0000049!3.23e-17!112;CL:0002009!8.44e-17!65;CL:0002194!1.07e-16!63;CL:0000576!1.07e-16!63;CL:0000040!1.07e-16!63;CL:0000559!1.07e-16!63;CL:0002057!2.34e-15!42;CL:0000860!6.55e-14!45;CL:0000738!7.00e-12!140;CL:0002031!1.99e-11!124;CL:0000037!3.32e-11!172;CL:0000566!3.32e-11!172;CL:0002032!3.42e-11!165;CL:0000837!3.42e-11!165;CL:0002320!2.19e-10!365;CL:0000134!5.39e-10!358;CL:0000048!2.93e-09!430;CL:0000723!7.74e-09!436;CL:0000988!1.46e-08!182;CL:0002087!1.95e-08!119;CL:0000034!2.00e-08!444 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.28e-13;39!CL:0000234;1.28e-13;39!CL:0000860;2.18e-13;33!CL:0002057;2.18e-13;33!CL:0000576;2.50e-11;48!CL:0000766;4.33e-10;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,3.65e-23,72;CL:0000839,3.88e-22,66;CL:0000557,5.12e-20,67;CL:0002009,1.36e-18,61;CL:0002194,1.57e-18,59;CL:0000576,1.57e-18,59;CL:0000040,1.57e-18,59;CL:0000559,1.57e-18,59;CL:0000763,2.11e-18,108;CL:0000049,2.11e-18,108;CL:0000473,2.65e-18,48;CL:0000234,2.65e-18,48;CL:0000860,2.34e-15,42;CL:0002057,2.34e-15,42;CL:0000738,1.22e-12,136;CL:0002031,3.14e-12,120;CL:0002032,7.71e-12,161;CL:0000837,7.71e-12,161;CL:0000037,7.80e-12,168;CL:0002320,7.04e-11,361;CL:0000134,1.76e-10,354;CL:0000048,1.61e-09,427;CL:0000988,2.30e-09,177;CL:0002087,4.31e-09,115;CL:0000723,4.35e-09,433;CL:0000034,1.14e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.08e-11;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.39e-20!112;UBERON:0002390!4.11e-20!102;UBERON:0003061!4.11e-20!102;UBERON:0002371!2.13e-16!80;UBERON:0004765!3.64e-14!101;UBERON:0001434!3.64e-14!101;UBERON:0001474!9.64e-14!86;UBERON:0002405!6.94e-13!115;UBERON:0002204!1.25e-09!167;UBERON:0002384!7.47e-09!375;UBERON:0003081!5.99e-08!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.09e-22,108;UBERON:0002390,1.50e-21,98;UBERON:0003061,1.50e-21,98;UBERON:0002405,4.02e-19,93;UBERON:0002371,6.98e-18,76;UBERON:0004765,2.08e-17,90;UBERON:0001434,3.36e-16,100;UBERON:0001474,5.83e-15,82;UBERON:0003081,1.08e-10,203;UBERON:0002204,1.20e-10,167;UBERON:0002384,2.70e-09,371 | |||
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| ||
|short_description=p1@NCOA4 | |short_description=p1@NCOA4 | ||
}} | }} |
Latest revision as of 10:33, 18 September 2015
Short description: | p1@NCOA4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCOA4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000330923, ENST00000374087, ENST00000414907, ENST00000430396, ENST00000498586_5end |
EntrezGene: | NCOA4 |
HGNC: | 7671 |
UniProt: | C9J6E0Q13772B4DZ85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 3.65e-23 | 72 |
myeloid lineage restricted progenitor cell | 3.88e-22 | 66 |
granulocyte monocyte progenitor cell | 5.12e-20 | 67 |
macrophage dendritic cell progenitor | 1.36e-18 | 61 |
monopoietic cell | 1.57e-18 | 59 |
monocyte | 1.57e-18 | 59 |
monoblast | 1.57e-18 | 59 |
promonocyte | 1.57e-18 | 59 |
myeloid cell | 2.11e-18 | 108 |
common myeloid progenitor | 2.11e-18 | 108 |
defensive cell | 2.65e-18 | 48 |
phagocyte | 2.65e-18 | 48 |
classical monocyte | 2.34e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.34e-15 | 42 |
leukocyte | 1.22e-12 | 136 |
hematopoietic lineage restricted progenitor cell | 3.14e-12 | 120 |
hematopoietic oligopotent progenitor cell | 7.71e-12 | 161 |
hematopoietic multipotent progenitor cell | 7.71e-12 | 161 |
hematopoietic stem cell | 7.80e-12 | 168 |
connective tissue cell | 7.04e-11 | 361 |
mesenchymal cell | 1.76e-10 | 354 |
multi fate stem cell | 1.61e-09 | 427 |
hematopoietic cell | 2.30e-09 | 177 |
nongranular leukocyte | 4.31e-09 | 115 |
somatic stem cell | 4.35e-09 | 433 |
stem cell | 1.14e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.09e-22 | 108 |
hematopoietic system | 1.50e-21 | 98 |
blood island | 1.50e-21 | 98 |
immune system | 4.02e-19 | 93 |
bone marrow | 6.98e-18 | 76 |
skeletal element | 2.08e-17 | 90 |
skeletal system | 3.36e-16 | 100 |
bone element | 5.83e-15 | 82 |
lateral plate mesoderm | 1.08e-10 | 203 |
musculoskeletal system | 1.20e-10 | 167 |
connective tissue | 2.70e-09 | 371 |