FFCP PHASE1:Mm9::chr5:9266097..9266202,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231014 | |EntrezGene=231014 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=278 | |||
|TSSclassifier=NA | |||
|UniProt=Q3UZV7,D6RHB7,E9PUJ3,B9EHI9 | |UniProt=Q3UZV7,D6RHB7,E9PUJ3,B9EHI9 | ||
|association_with_transcript=0bp_to_ENSMUST00000069538,ENSMUST00000115348,ENSMUST00000131626,ENSMUST00000134991,ENSMUST00000152095,ENSMUST00000154662,ENSMUST00000155764,ENSMUST00000166011,NM_172706,uc008wlh.1,uc008wli.1,uc008wlj.1,uc008wlk.1,uc012dsc.1,uc012dsd.1,uc012dse.1_5end | |association_with_transcript=0bp_to_ENSMUST00000069538,ENSMUST00000115348,ENSMUST00000131626,ENSMUST00000134991,ENSMUST00000152095,ENSMUST00000154662,ENSMUST00000155764,ENSMUST00000166011,NM_172706,uc008wlh.1,uc008wli.1,uc008wlj.1,uc008wlk.1,uc012dsc.1,uc012dsd.1,uc012dse.1_5end | ||
|cluster_id=chr5:9266097..9266202,+ | |||
|description=CAGE_peak_1_at_9330182L06Rik_5end | |description=CAGE_peak_1_at_9330182L06Rik_5end | ||
|id=chr5:9266097..9266202,+ | |id=chr5:9266097..9266202,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.67e-12!33;CL:0000047!1.67e-12!33;CL:0000031!1.67e-12!33;CL:0000404!1.67e-12!33;CL:0000393!8.20e-10!39;CL:0000211!8.20e-10!39;CL:0002319!3.81e-09!43;CL:0000117!5.45e-09!23;CL:0000337!5.45e-09!23;CL:0000221!5.93e-09!44;CL:0000133!5.93e-09!44;CL:0000055!3.95e-07!50 | |ontology_enrichment_celltype=CL:0000540!1.67e-12!33;CL:0000047!1.67e-12!33;CL:0000031!1.67e-12!33;CL:0000404!1.67e-12!33;CL:0000393!8.20e-10!39;CL:0000211!8.20e-10!39;CL:0002319!3.81e-09!43;CL:0000117!5.45e-09!23;CL:0000337!5.45e-09!23;CL:0000221!5.93e-09!44;CL:0000133!5.93e-09!44;CL:0000055!3.95e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,6.46e-13,33;CL:0000047,6.46e-13,33;CL:0000031,6.46e-13,33;CL:0000404,6.46e-13,33;CL:0000393,2.27e-10,39;CL:0000211,2.27e-10,39;CL:0002319,1.45e-09,43;CL:0000221,2.31e-09,44;CL:0000133,2.31e-09,44;CL:0000117,2.85e-09,23;CL:0000337,2.85e-09,23 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.02e-26!73;UBERON:0005743!2.02e-26!73;UBERON:0002346!2.64e-26!71;UBERON:0003075!2.64e-26!71;UBERON:0007284!2.64e-26!71;UBERON:0000073!5.89e-26!75;UBERON:0001016!5.89e-26!75;UBERON:0004121!3.47e-25!102;UBERON:0000924!3.47e-25!102;UBERON:0006601!3.47e-25!102;UBERON:0001049!3.75e-20!52;UBERON:0005068!3.75e-20!52;UBERON:0006241!3.75e-20!52;UBERON:0007135!3.75e-20!52;UBERON:0000033!3.37e-19!63;UBERON:0000955!4.40e-19!50;UBERON:0006238!4.40e-19!50;UBERON:0002616!1.14e-18!49;UBERON:0003056!2.76e-17!49;UBERON:0003080!2.74e-15!40;UBERON:0002780!1.27e-14!39;UBERON:0001890!1.27e-14!39;UBERON:0006240!1.27e-14!39;UBERON:0002020!2.11e-13!34;UBERON:0002791!6.97e-11!29;UBERON:0003528!6.97e-11!29;UBERON:0001893!6.97e-11!29;UBERON:0002021!2.87e-07!10;UBERON:0000411!2.87e-07!10;UBERON:0001950!2.87e-07!10;UBERON:0000956!3.87e-07!21;UBERON:0001869!3.87e-07!21;UBERON:0000203!3.87e-07!21;UBERON:0002619!3.98e-07!17;UBERON:0000468!4.36e-07!333 | |ontology_enrichment_uberon=UBERON:0001017!2.02e-26!73;UBERON:0005743!2.02e-26!73;UBERON:0002346!2.64e-26!71;UBERON:0003075!2.64e-26!71;UBERON:0007284!2.64e-26!71;UBERON:0000073!5.89e-26!75;UBERON:0001016!5.89e-26!75;UBERON:0004121!3.47e-25!102;UBERON:0000924!3.47e-25!102;UBERON:0006601!3.47e-25!102;UBERON:0001049!3.75e-20!52;UBERON:0005068!3.75e-20!52;UBERON:0006241!3.75e-20!52;UBERON:0007135!3.75e-20!52;UBERON:0000033!3.37e-19!63;UBERON:0000955!4.40e-19!50;UBERON:0006238!4.40e-19!50;UBERON:0002616!1.14e-18!49;UBERON:0003056!2.76e-17!49;UBERON:0003080!2.74e-15!40;UBERON:0002780!1.27e-14!39;UBERON:0001890!1.27e-14!39;UBERON:0006240!1.27e-14!39;UBERON:0002020!2.11e-13!34;UBERON:0002791!6.97e-11!29;UBERON:0003528!6.97e-11!29;UBERON:0001893!6.97e-11!29;UBERON:0002021!2.87e-07!10;UBERON:0000411!2.87e-07!10;UBERON:0001950!2.87e-07!10;UBERON:0000956!3.87e-07!21;UBERON:0001869!3.87e-07!21;UBERON:0000203!3.87e-07!21;UBERON:0002619!3.98e-07!17;UBERON:0000468!4.36e-07!333 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.48e-27,73;UBERON:0001016,4.53e-27,75;UBERON:0002346,5.41e-25,64;UBERON:0003075,5.41e-25,64;UBERON:0007284,5.41e-25,64;UBERON:0004121,8.28e-24,95;UBERON:0000924,8.28e-24,95;UBERON:0006601,8.28e-24,95;UBERON:0000073,2.20e-22,54;UBERON:0001049,4.77e-21,52;UBERON:0005068,4.77e-21,52;UBERON:0006241,4.77e-21,52;UBERON:0007135,4.77e-21,52;UBERON:0010371,4.97e-21,73;UBERON:0010314,3.22e-18,92;UBERON:0000955,6.68e-18,47;UBERON:0006238,6.68e-18,47;UBERON:0003056,7.02e-18,49;UBERON:0002616,1.76e-17,46;UBERON:0003080,8.28e-16,40;UBERON:0002780,4.09e-15,39;UBERON:0001890,4.09e-15,39;UBERON:0006240,4.09e-15,39;UBERON:0002020,7.55e-14,34;UBERON:0003528,3.10e-11,29;UBERON:0002791,3.10e-11,29;UBERON:0001893,3.10e-11,29;UBERON:0002021,1.74e-07,10;UBERON:0000411,1.74e-07,10;UBERON:0001950,1.74e-07,10;UBERON:0000956,2.38e-07,21;UBERON:0001869,2.38e-07,21;UBERON:0000203,2.38e-07,21;UBERON:0002619,2.44e-07,17 | |||
|phase1_expression=2.88267924788629,0,0,0,0,0.16787927191189,0.233612640595526,0,0,0,0,0.0797721589953364,0,0,0,0,0,0,0.411343300817216,0.42438965179803,9.35476191661768,0,0,0.159992422793407,0.68822784320151,0,1.29228598847722,0.215471232685889,0,0.252030129759931,0,0.635030673459631,2.46025915033828,0,0.866554859253824,0.498703936075477,0.204169356262369,0,0.7813353445238,0,0,0,0,0,0.202753862439029,0,0,3.70642765846759,1.5378032791413,1.74986909166855,1.67983705950435,1.43752564364972,0,0,0,1.54355661621568,2.57880095944881,28.8776371675368,14.7691016427506,10.0508286061686,13.3104594736298,0.338844532069132,0,0,0.988866362566974,0,1.19840044207362,1.53687322128622,3.83651565541367,1.62007125998029,3.57552434297349,25.1372866275347,22.307722636113,4.89963196859816,4.40889166683887,8.27296907949019,30.8324466798288,44.179818977475,43.7778619780294,15.2988093767025,12.7167824607349,13.022834263919,29.5933978941464,32.0774687718058,32.2404302809069,25.9273155216828,26.4811326286331,30.0103107778734,1.4387976733305,3.55186332501892,3.18850937571846,0.860423876981386,0,0,0,0.448026887097336,2.38755514223978,0,0,0,1.83096445709685,0,0,0,1.29894624606728,1.26679932737549,1.51657333504435,0.79928715803342,0,14.8442139064825,8.50078101154066,7.00270600117925,6.22661842591358,13.4143150091834,12.8171690777918,6.78599593180248,0,0.578397427679647,0,1.45590164952668,0.220841518460394,1.45462575940567,1.86391761218122,36.5975996264434,34.1398132105932,0.766371165625774,1.43778149407104,0.599902730993408,1.01656181658452,45.0869824608516,38.4300506367646,20.6073137465098,30.7669046740329,39.3801804288709,39.2719404217569,39.1001443993296,2.34230536855727,1.36847667671102,3.0326731012041,3.99839526184301,4.81445638962004,5.28774840196988,6.66229880279792,7.83665052745718,10.9538763633638,11.6583485459213,9.37017245597288,11.9003550539947,2.58681591519411,4.9167580843633,5.45448484908241,3.28793598641362,4.72680323683516,3.48252166522167,3.08673204611915,1.39323986772945,0,0.257347907114715,0.568326998791185,2.27838349789052,1.64168241986767,1.80062061461015,4.26140524053378,0.590292695242212,1.54267112887378,0.465067889500816,1.07309360559848,1.05088808130453,0.658239399653922,0.32833492815819,0.0810688095458557,0,0,0.268412837520744,17.8746456279508,15.0240734073755,0.330418782983798,0.793351699990633,3.62590025909898,4.64473343720877,3.22168653305233,1.61346819698674,2.66853652613844,2.28270751335071,1.89811624617805,1.31759163779209,5.7807098024062,2.38747766449381,3.11942539390592,2.69645822596266,1.51296634912286,1.1948476395262,2.46568271239006,2.62771579002376,1.1270773567308,2.03651327845314,0.775809948670503,1.82353131714828,1.13825766823663,0.295220295959204,0,0.123397163921801,0,0.166845105716094,0.589676985339609,0,0.405720242777006,0.482354319504834,1.2731292589071,1.15078454980324,0.162135226775035,0.274561413188081,0,1.86070473834252,1.87222603868736,1.26289438973556,0.358794827043824,0.482443521363367,12.3784637411625,2.65287976478679,2.60743962307241,1.52770577197669,2.34690248288502,13.0654880804616,21.1858840388552,27.7089779958074,8.6699329258405,6.86540537911202,5.89982644032702,9.66793556822854,8.80693407516067,16.3453436197108,0,0.54390568381871,0,0,48.3257275863254,45.7125577709592,0,0.504941854408746,17.9839685067266,19.1314984705353,26.2816545234015,7.40803273652911,11.3627323782021,9.34152551603147,18.2164815753702,25.1340037803728,30.0418711239358,12.5315313404505,1.84522110770749,1.42452482933804,3.4206261464251,2.96946221350564,2.65490276679926,1.69946445308487,1.51161778482376,4.33791683438566,4.72483028609236,4.91896236710284,9.30341855405596,5.81653967164009,5.70395805415554,4.74055136903724,2.10837217149998,0,113.025949110258,4.50152735078276,2.19909762430683,4.50107773566344,14.1872186913819,34.4251817971996,42.2890982947451,21.312546438022,0.23467170806371,0,1.98475558249466,0,4.84393280087717,3.79971427047382,3.34242563208782,0.820704498725306,0,53.9587628850583,0.854354403989263,1.23832120777933,1.66675074632741,0.565105371014073,0.27338845544205,0.228778173206523,1.86976272993241,2.93898049879682,1.52019971184866,2.86401185404534,3.47969592939249,8.53941761932765,7.45236851670429,8.36353184057875,8.07941485860857,7.28267470478032,7.52146447100557,5.23511883968059,1.94422459937689,0,0.56369293868419,1.64468200648377,0.992750942742586,2.52786544847262,2.0665571756437,1.85851738039856,2.22978753426933,2.0832701575032,4.50895181030557,0.483168241652012,1.15212002503146,0.948033361884535,1.62180172232131,1.33524244314275,0.129920822977795,0.358053391334963,0.39736270956253,0,0.147689527174577,0.403865799792591,0.0762068066549998,0,0.194915761479505,0,0.233753804363138,0.906921534460845,0.221985953374065,0,0.167884616364078,4.25017106870819,2.25218970541418,2.19781949120718,1.07184189539533,2.00628841614145,33.3203587144069,40.9689460491387,49.8419096692275,33.8550769217065,34.2541259885321,33.9927253825365,22.2757425076496,29.2708782095743,33.9856806738153,40.9030646283938,1.7643849089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| 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| ||
|short_description=p1@9330182L06Rik | |short_description=p1@9330182L06Rik | ||
}} | }} |
Latest revision as of 09:01, 26 September 2015
Short description: | p1@9330182L06Rik |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_9330182L06Rik_5end |
Coexpression cluster: | MCL_coexpression_mm9:278 |
Association with transcript: | 0bp_to_ENSMUST00000069538, ENSMUST00000115348, ENSMUST00000131626, ENSMUST00000134991, ENSMUST00000152095, ENSMUST00000154662, ENSMUST00000155764, ENSMUST00000166011, NM_172706, uc008wlh.1, uc008wli.1, uc008wlj.1, uc008wlk.1, uc012dsc.1, uc012dsd.1, uc012dse.1_5end |
EntrezGene: | 9330182L06Rik |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 6.46e-13 | 33 |
neuronal stem cell | 6.46e-13 | 33 |
neuroblast | 6.46e-13 | 33 |
electrically signaling cell | 6.46e-13 | 33 |
electrically responsive cell | 2.27e-10 | 39 |
electrically active cell | 2.27e-10 | 39 |
neural cell | 1.45e-09 | 43 |
ectodermal cell | 2.31e-09 | 44 |
neurectodermal cell | 2.31e-09 | 44 |
CNS neuron (sensu Vertebrata) | 2.85e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.85e-09 | 23 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.48e-27 | 73 |
nervous system | 4.53e-27 | 75 |
neurectoderm | 5.41e-25 | 64 |
neural plate | 5.41e-25 | 64 |
presumptive neural plate | 5.41e-25 | 64 |
ectoderm-derived structure | 8.28e-24 | 95 |
ectoderm | 8.28e-24 | 95 |
presumptive ectoderm | 8.28e-24 | 95 |
regional part of nervous system | 2.20e-22 | 54 |
neural tube | 4.77e-21 | 52 |
neural rod | 4.77e-21 | 52 |
future spinal cord | 4.77e-21 | 52 |
neural keel | 4.77e-21 | 52 |
ecto-epithelium | 4.97e-21 | 73 |
structure with developmental contribution from neural crest | 3.22e-18 | 92 |
brain | 6.68e-18 | 47 |
future brain | 6.68e-18 | 47 |
pre-chordal neural plate | 7.02e-18 | 49 |
regional part of brain | 1.76e-17 | 46 |
anterior neural tube | 8.28e-16 | 40 |
regional part of forebrain | 4.09e-15 | 39 |
forebrain | 4.09e-15 | 39 |
future forebrain | 4.09e-15 | 39 |
gray matter | 7.55e-14 | 34 |
brain grey matter | 3.10e-11 | 29 |
regional part of telencephalon | 3.10e-11 | 29 |
telencephalon | 3.10e-11 | 29 |
occipital lobe | 1.74e-07 | 10 |
visual cortex | 1.74e-07 | 10 |
neocortex | 1.74e-07 | 10 |
cerebral cortex | 2.38e-07 | 21 |
cerebral hemisphere | 2.38e-07 | 21 |
pallium | 2.38e-07 | 21 |
regional part of cerebral cortex | 2.44e-07 | 17 |