FFCP PHASE1:Hg19::chr10:47589428..47589451,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:47589428..47589451,- | |||
|coexpression_cluster_id=C3019 | |||
|description=CAGE_peak_at_chr10:47589428..47589451,- | |description=CAGE_peak_at_chr10:47589428..47589451,- | ||
|id=chr10:47589428..47589451,- | |id=chr10:47589428..47589451,- | ||
|ontology_enrichment_celltype=CL:0000542!3.31e-34!53;CL:0000051!3.31e-34!53;CL:0000838!9.27e-33!52;CL:0000084!1.62e-22!25;CL:0000827!1.62e-22!25;CL:0000791!6.59e-22!18;CL:0000789!6.59e-22!18;CL:0002420!6.59e-22!18;CL:0002419!6.59e-22!18;CL:0000790!6.59e-22!18;CL:0002087!2.35e-20!119;CL:0000738!1.08e-16!140;CL:0002031!1.49e-14!124;CL:0000624!5.96e-14!6;CL:0000625!6.16e-12!11;CL:0000037!1.65e-11!172;CL:0000566!1.65e-11!172;CL:0000988!2.75e-10!182;CL:0002032!3.14e-09!165;CL:0000837!3.14e-09!165;CL:0000236!1.22e-08!14;CL:0000945!3.26e-08!24;CL:0000826!3.26e-08!24;CL:0000623!6.96e-08!3;CL:0000825!6.96e-08!3;CL:0000842!1.63e-07!3;CL:0000898!2.41e-07!3 | |ontology_enrichment_celltype=CL:0000542!3.31e-34!53;CL:0000051!3.31e-34!53;CL:0000838!9.27e-33!52;CL:0000084!1.62e-22!25;CL:0000827!1.62e-22!25;CL:0000791!6.59e-22!18;CL:0000789!6.59e-22!18;CL:0002420!6.59e-22!18;CL:0002419!6.59e-22!18;CL:0000790!6.59e-22!18;CL:0002087!2.35e-20!119;CL:0000738!1.08e-16!140;CL:0002031!1.49e-14!124;CL:0000624!5.96e-14!6;CL:0000625!6.16e-12!11;CL:0000037!1.65e-11!172;CL:0000566!1.65e-11!172;CL:0000988!2.75e-10!182;CL:0002032!3.14e-09!165;CL:0000837!3.14e-09!165;CL:0000236!1.22e-08!14;CL:0000945!3.26e-08!24;CL:0000826!3.26e-08!24;CL:0000623!6.96e-08!3;CL:0000825!6.96e-08!3;CL:0000842!1.63e-07!3;CL:0000898!2.41e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000084;4.66e-20;25!CL:0000791;2.67e-15;18!CL:0000789;2.67e-15;18!CL:0002419;2.67e-15;18!CL:0000623;3.40e-14;3!CL:0000226;1.36e-13;3!CL:0000842;1.36e-13;3!CL:0000624;7.50e-13;6!CL:0000542;8.22e-11;53!CL:0000625;8.33e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,4.58e-20,25;CL:0000827,4.58e-20,25;CL:0000838,8.59e-19,52;CL:0000542,2.28e-18,53;CL:0000051,2.28e-18,53;CL:0000791,2.63e-15,18;CL:0000789,2.63e-15,18;CL:0002420,2.63e-15,18;CL:0002419,2.63e-15,18;CL:0000790,2.63e-15,18;CL:0000623,3.11e-14,3;CL:0000825,3.11e-14,3;CL:0000226,1.69e-13,3;CL:0000842,1.69e-13,3;CL:0000624,6.26e-13,6;CL:0002087,1.22e-09,115;CL:0000738,1.56e-08,136;CL:0000625,9.01e-07,11 | |||
|ontology_enrichment_development_v019=CL:0000790;2.67e-15;18!CL:0000051;8.22e-11;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!2.05e-10!15;UBERON:0000179!2.05e-10!15;UBERON:0000463!2.05e-10!15;UBERON:0004177!2.03e-07!7 | |ontology_enrichment_uberon=UBERON:0000178!2.05e-10!15;UBERON:0000179!2.05e-10!15;UBERON:0000463!2.05e-10!15;UBERON:0004177!2.03e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002370;5.07e-10;2!UBERON:0005058;5.07e-10;2!UBERON:0009113;5.07e-10;2!UBERON:0000178;7.63e-10;15!UBERON:0000179;7.63e-10;15!UBERON:0000463;7.63e-10;15!UBERON:0002390;5.49e-07;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,8.57e-10,15;UBERON:0000179,8.57e-10,15;UBERON:0000463,8.57e-10,15 | |||
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| ||
|short_description=p@chr10:47589428..47589451,- | |short_description=p@chr10:47589428..47589451,- | ||
}} | }} |
Latest revision as of 13:52, 23 July 2015
Short description: | p@chr10:47589428..47589451, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:47589428..47589451, - |
Coexpression cluster: | C3019_chronic_CD4_CD8_Natural_Hodgkin_thymus_Whole |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 4.58e-20 | 25 |
pro-T cell | 4.58e-20 | 25 |
lymphoid lineage restricted progenitor cell | 8.59e-19 | 52 |
lymphocyte | 2.28e-18 | 53 |
common lymphoid progenitor | 2.28e-18 | 53 |
mature alpha-beta T cell | 2.63e-15 | 18 |
alpha-beta T cell | 2.63e-15 | 18 |
immature T cell | 2.63e-15 | 18 |
mature T cell | 2.63e-15 | 18 |
immature alpha-beta T cell | 2.63e-15 | 18 |
natural killer cell | 3.11e-14 | 3 |
pro-NK cell | 3.11e-14 | 3 |
single nucleate cell | 1.69e-13 | 3 |
mononuclear cell | 1.69e-13 | 3 |
CD4-positive, alpha-beta T cell | 6.26e-13 | 6 |
nongranular leukocyte | 1.22e-09 | 115 |
leukocyte | 1.56e-08 | 136 |
CD8-positive, alpha-beta T cell | 9.01e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
blood | 8.57e-10 | 15 |
haemolymphatic fluid | 8.57e-10 | 15 |
organism substance | 8.57e-10 | 15 |