FFCP PHASE1:Hg19::chr10:33217106..33217178,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:33217106..33217178,- | |||
|coexpression_cluster_id=C582 | |||
|description=CAGE_peak_at_chr10:33217106..33217178,- | |description=CAGE_peak_at_chr10:33217106..33217178,- | ||
|id=chr10:33217106..33217178,- | |id=chr10:33217106..33217178,- | ||
|ontology_enrichment_celltype=CL:0000055!1.50e-13!180;CL:0000057!7.38e-12!75;CL:0000548!1.35e-09!679;CL:0000004!1.35e-09!679;CL:0000255!1.35e-09!679;CL:0000012!4.02e-09!682;CL:0000144!2.75e-08!625;CL:0002371!4.19e-07!591;CL:0002620!6.50e-07!23;CL:0000680!8.70e-07!57;CL:0000056!8.70e-07!57;CL:0000355!8.70e-07!57 | |ontology_enrichment_celltype=CL:0000055!1.50e-13!180;CL:0000057!7.38e-12!75;CL:0000548!1.35e-09!679;CL:0000004!1.35e-09!679;CL:0000255!1.35e-09!679;CL:0000012!4.02e-09!682;CL:0000144!2.75e-08!625;CL:0002371!4.19e-07!591;CL:0002620!6.50e-07!23;CL:0000680!8.70e-07!57;CL:0000056!8.70e-07!57;CL:0000355!8.70e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.54e-07;23!CL:0002334;2.44e-07;12!CL:0000134;8.37e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,4.02e-14,76;CL:0000048,3.77e-08,427;CL:0000723,4.07e-08,433;CL:0000680,1.01e-07,58;CL:0000056,1.01e-07,58;CL:0000355,1.01e-07,58;CL:0000034,1.63e-07,441;CL:0002620,1.90e-07,23;CL:0002334,2.01e-07,12;CL:0000222,5.71e-07,121;CL:0000187,9.12e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!4.04e-09!14 | |ontology_enrichment_disease=DOID:2394!4.04e-09!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.59e-10;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,3.64e-10,14 | |||
|ontology_enrichment_uberon=UBERON:0004872!2.20e-07!84;UBERON:0000926!3.16e-07!448;UBERON:0004120!3.16e-07!448;UBERON:0006603!3.16e-07!448;UBERON:0000914!3.48e-07!83;UBERON:0002329!3.48e-07!83;UBERON:0003077!3.48e-07!83;UBERON:0003059!3.48e-07!83;UBERON:0007282!3.48e-07!83;UBERON:0009618!3.48e-07!83;UBERON:0007285!3.48e-07!83;UBERON:0001009!3.67e-07!113;UBERON:0004535!3.73e-07!110 | |ontology_enrichment_uberon=UBERON:0004872!2.20e-07!84;UBERON:0000926!3.16e-07!448;UBERON:0004120!3.16e-07!448;UBERON:0006603!3.16e-07!448;UBERON:0000914!3.48e-07!83;UBERON:0002329!3.48e-07!83;UBERON:0003077!3.48e-07!83;UBERON:0003059!3.48e-07!83;UBERON:0007282!3.48e-07!83;UBERON:0009618!3.48e-07!83;UBERON:0007285!3.48e-07!83;UBERON:0001009!3.67e-07!113;UBERON:0004535!3.73e-07!110 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,1.53e-07,73;UBERON:0002329,1.84e-07,71;UBERON:0003059,1.84e-07,71;UBERON:0007282,1.84e-07,71;UBERON:0004290,1.84e-07,71;UBERON:0009618,1.84e-07,71;UBERON:0003102,2.50e-07,99;UBERON:0001134,2.89e-07,62;UBERON:0002036,2.89e-07,62;UBERON:0003082,2.89e-07,62;UBERON:0002385,3.00e-07,64;UBERON:0001015,3.00e-07,64;UBERON:0000383,3.00e-07,64;UBERON:0000486,3.18e-07,83;UBERON:0003077,3.91e-07,72;UBERON:0007285,3.91e-07,72 | |||
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| ||
|short_description=p@chr10:33217106..33217178,- | |short_description=p@chr10:33217106..33217178,- | ||
}} | }} |
Latest revision as of 13:18, 23 July 2015
Short description: | p@chr10:33217106..33217178, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:33217106..33217178, - |
Coexpression cluster: | C582_Smooth_tenocyte_mesenchymal_leiomyoma_Fibroblast_Olfactory_Aortic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 4.02e-14 | 76 |
multi fate stem cell | 3.77e-08 | 427 |
somatic stem cell | 4.07e-08 | 433 |
muscle precursor cell | 1.01e-07 | 58 |
myoblast | 1.01e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.01e-07 | 58 |
stem cell | 1.63e-07 | 441 |
skin fibroblast | 1.90e-07 | 23 |
preadipocyte | 2.01e-07 | 12 |
mesodermal cell | 5.71e-07 | 121 |
muscle cell | 9.12e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
dense mesenchyme tissue | 1.53e-07 | 73 |
somite | 1.84e-07 | 71 |
presomitic mesoderm | 1.84e-07 | 71 |
presumptive segmental plate | 1.84e-07 | 71 |
dermomyotome | 1.84e-07 | 71 |
trunk paraxial mesoderm | 1.84e-07 | 71 |
surface structure | 2.50e-07 | 99 |
skeletal muscle tissue | 2.89e-07 | 62 |
striated muscle tissue | 2.89e-07 | 62 |
myotome | 2.89e-07 | 62 |
muscle tissue | 3.00e-07 | 64 |
musculature | 3.00e-07 | 64 |
musculature of body | 3.00e-07 | 64 |
multilaminar epithelium | 3.18e-07 | 83 |
paraxial mesoderm | 3.91e-07 | 72 |
presumptive paraxial mesoderm | 3.91e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.64e-10 | 14 |