FFCP PHASE1:Hg19::chr14:23317235..23317240,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr14:23317235..23317240,+ | |||
|coexpression_cluster_id=C174 | |||
|description=CAGE_peak_at_chr14:23317235..23317240,+ | |description=CAGE_peak_at_chr14:23317235..23317240,+ | ||
|id=chr14:23317235..23317240,+ | |id=chr14:23317235..23317240,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.16e-24!42;CL:0000860!4.04e-22!45;CL:0002194!6.56e-14!63;CL:0000576!6.56e-14!63;CL:0000040!6.56e-14!63;CL:0000559!6.56e-14!63;CL:0002009!2.52e-13!65;CL:0000766!3.18e-13!76;CL:0000839!5.16e-12!70;CL:0000557!8.97e-12!71;CL:0000034!3.13e-09!444;CL:0000723!5.31e-09!436;CL:0000048!9.76e-09!430;CL:0000763!4.78e-08!112;CL:0000049!4.78e-08!112;CL:0002320!5.10e-08!365;CL:0000134!8.32e-08!358;CL:0000219!1.03e-07!390;CL:0000569!8.26e-07!4;CL:0000011!8.26e-07!4 | |ontology_enrichment_celltype=CL:0002057!4.16e-24!42;CL:0000860!4.04e-22!45;CL:0002194!6.56e-14!63;CL:0000576!6.56e-14!63;CL:0000040!6.56e-14!63;CL:0000559!6.56e-14!63;CL:0002009!2.52e-13!65;CL:0000766!3.18e-13!76;CL:0000839!5.16e-12!70;CL:0000557!8.97e-12!71;CL:0000034!3.13e-09!444;CL:0000723!5.31e-09!436;CL:0000048!9.76e-09!430;CL:0000763!4.78e-08!112;CL:0000049!4.78e-08!112;CL:0002320!5.10e-08!365;CL:0000134!8.32e-08!358;CL:0000219!1.03e-07!390;CL:0000569!8.26e-07!4;CL:0000011!8.26e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.59e-40;33!CL:0002057;3.59e-40;33!CL:0000473;1.04e-27;39!CL:0000234;1.04e-27;39!CL:0000576;8.78e-19;48!CL:0002559;3.88e-13;5!CL:0000766;7.06e-10;69!CL:0002561;6.17e-09;2!CL:0002087;2.05e-08;104!CL:0000763;2.48e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.59e-35,42;CL:0002057,1.59e-35,42;CL:0000473,5.41e-31,48;CL:0000234,5.41e-31,48;CL:0002194,1.21e-24,59;CL:0000576,1.21e-24,59;CL:0000040,1.21e-24,59;CL:0000559,1.21e-24,59;CL:0002009,8.04e-24,61;CL:0000839,5.53e-22,66;CL:0000557,1.20e-21,67;CL:0000766,4.15e-20,72;CL:0000763,3.57e-13,108;CL:0000049,3.57e-13,108;CL:0002559,4.39e-13,5;CL:0002087,2.54e-12,115;CL:0002031,8.99e-12,120;CL:0000738,2.77e-10,136;CL:0002561,6.42e-09,2;CL:0002032,1.54e-08,161;CL:0000837,1.54e-08,161;CL:0000037,3.84e-08,168;CL:0000988,1.12e-07,177 | |||
|ontology_enrichment_development_v019=CL:0002057;1.91e-23;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.13e-12!80;UBERON:0001474!2.26e-12!86;UBERON:0004765!9.91e-11!101;UBERON:0001434!9.91e-11!101;UBERON:0002204!1.39e-09!167;UBERON:0002405!1.25e-08!115;UBERON:0002390!1.51e-08!102;UBERON:0003061!1.51e-08!102;UBERON:0002384!4.81e-08!375;UBERON:0002193!2.54e-07!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;3.88e-13;5!UBERON:0005933;6.17e-09;2!UBERON:0005942;6.17e-09;2!UBERON:0005932;6.17e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.08e-19,76;UBERON:0001474,1.39e-17,82;UBERON:0004765,5.84e-16,90;UBERON:0002405,2.02e-15,93;UBERON:0002390,1.35e-14,98;UBERON:0003061,1.35e-14,98;UBERON:0001434,2.73e-14,100;UBERON:0002193,3.57e-13,108;UBERON:0002073,4.39e-13,5;UBERON:0005086,4.39e-13,5;UBERON:0005933,6.42e-09,2;UBERON:0005942,6.42e-09,2;UBERON:0005932,6.42e-09,2;UBERON:0002204,3.38e-08,167;UBERON:0003081,4.90e-08,203 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393364276848904,0,0.154816123316076,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0.929716147622738,0.822335776043652,0.619412741790207,0.863077176966451,0,0.709446689665756,0.344745680736619,0,1.35426486594342,0,0,0.449446968890169,2.14258724659632,0.962787081228281,1.91801137739712,0,0,0,5.80418477257168,1.70215567407342,1.86846674698672,0,1.5644487552606,0.434377689410233,3.02699751316684,1.10483290796269,1.58231193720442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05927344650575,0,0,0,0,0.24666754841716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.247266929278557,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0.928735856063958,1.44375896333917,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0,0,0,0,0.0821271560138091,0,0.116210378459959,0,0,0,0,0.182091168006717,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0,0,0,0,0,0,0,0,0.6970372701606,0,0,0,0,0,0,0,0,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0.655894752046633,0,0.6196469961995,0,0.286822704408103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227884111694002,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.568209015825267,0.50313580350515,0,0.228840068396924,0.302461847526478,0.310874401165561,0,0.159296767163702,0,0,0,0,0,0,0.380805212168795,0.406870733204662,0.909243296012797,0,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132864840313363,0,0.327609848846413,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352675943690684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236664001461131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr14:23317235..23317240,+ | |short_description=p@chr14:23317235..23317240,+ | ||
}} | }} |
Latest revision as of 19:20, 24 July 2015
Short description: | p@chr14:23317235..23317240, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr14:23317235..23317240, + |
Coexpression cluster: | C174_CD14_Neutrophils_Smooth_mesothelioma_embryonic_Monocytederived_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.59e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.59e-35 | 42 |
defensive cell | 5.41e-31 | 48 |
phagocyte | 5.41e-31 | 48 |
monopoietic cell | 1.21e-24 | 59 |
monocyte | 1.21e-24 | 59 |
monoblast | 1.21e-24 | 59 |
promonocyte | 1.21e-24 | 59 |
macrophage dendritic cell progenitor | 8.04e-24 | 61 |
myeloid lineage restricted progenitor cell | 5.53e-22 | 66 |
granulocyte monocyte progenitor cell | 1.20e-21 | 67 |
myeloid leukocyte | 4.15e-20 | 72 |
myeloid cell | 3.57e-13 | 108 |
common myeloid progenitor | 3.57e-13 | 108 |
hair follicle cell | 4.39e-13 | 5 |
nongranular leukocyte | 2.54e-12 | 115 |
hematopoietic lineage restricted progenitor cell | 8.99e-12 | 120 |
leukocyte | 2.77e-10 | 136 |
outer root sheath cell | 6.42e-09 | 2 |
hematopoietic oligopotent progenitor cell | 1.54e-08 | 161 |
hematopoietic multipotent progenitor cell | 1.54e-08 | 161 |
hematopoietic stem cell | 3.84e-08 | 168 |
hematopoietic cell | 1.12e-07 | 177 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.08e-19 | 76 |
bone element | 1.39e-17 | 82 |
skeletal element | 5.84e-16 | 90 |
immune system | 2.02e-15 | 93 |
hematopoietic system | 1.35e-14 | 98 |
blood island | 1.35e-14 | 98 |
skeletal system | 2.73e-14 | 100 |
hemolymphoid system | 3.57e-13 | 108 |
hair follicle | 4.39e-13 | 5 |
hair follicle placode | 4.39e-13 | 5 |
hair root sheath | 6.42e-09 | 2 |
hair outer root sheath | 6.42e-09 | 2 |
bulb of hair follicle | 6.42e-09 | 2 |
musculoskeletal system | 3.38e-08 | 167 |
lateral plate mesoderm | 4.90e-08 | 203 |