FFCP PHASE1:Hg19::chr14:106328338..106328349,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3507 | |EntrezGene=3507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5541 | |HGNC=5541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-170bp_to_X58529_5end | |association_with_transcript=-170bp_to_X58529_5end | ||
|cluster_id=chr14:106328338..106328349,- | |||
|coexpression_cluster_id=C47 | |||
|description=CAGE_peak_3_at_IGHM_5end | |description=CAGE_peak_3_at_IGHM_5end | ||
|id=chr14:106328338..106328349,- | |id=chr14:106328338..106328349,- | ||
|ontology_enrichment_celltype=CL:0000945!5.97e-56!24;CL:0000826!5.97e-56!24;CL:0000236!4.72e-38!14;CL:0000542!3.93e-28!53;CL:0000051!3.93e-28!53;CL:0000838!2.46e-26!52;CL:0000037!5.42e-15!172;CL:0000566!5.42e-15!172;CL:0000738!7.55e-15!140;CL:0002087!2.36e-14!119;CL:0000988!1.36e-13!182;CL:0002032!2.20e-10!165;CL:0000837!2.20e-10!165;CL:0002031!1.94e-09!124;CL:0000817!7.56e-09!3;CL:0000842!1.49e-08!3 | |ontology_enrichment_celltype=CL:0000945!5.97e-56!24;CL:0000826!5.97e-56!24;CL:0000236!4.72e-38!14;CL:0000542!3.93e-28!53;CL:0000051!3.93e-28!53;CL:0000838!2.46e-26!52;CL:0000037!5.42e-15!172;CL:0000566!5.42e-15!172;CL:0000738!7.55e-15!140;CL:0002087!2.36e-14!119;CL:0000988!1.36e-13!182;CL:0002032!2.20e-10!165;CL:0000837!2.20e-10!165;CL:0002031!1.94e-09!124;CL:0000817!7.56e-09!3;CL:0000842!1.49e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000236;4.09e-68;13!CL:0000945;6.73e-68;24!CL:0000542;9.92e-22;53!CL:0000226;1.13e-07;3!CL:0000842;1.13e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.90e-68,24;CL:0000826,6.90e-68,24;CL:0000236,4.75e-63,14;CL:0000542,5.89e-32,53;CL:0000051,5.89e-32,53;CL:0000838,3.99e-29,52;CL:0002087,2.32e-15,115;CL:0000037,1.47e-12,168;CL:0000738,2.73e-12,136;CL:0000988,1.17e-11,177;CL:0002031,3.21e-10,120;CL:0002032,1.13e-09,161;CL:0000837,1.13e-09,161;CL:0000817,7.91e-08,3;CL:0000226,1.37e-07,3;CL:0000842,1.37e-07,3 | |||
|ontology_enrichment_development_v019=CL:0000051;9.92e-22;53!UBERON:0004872;3.96e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!5.17e-09!10;DOID:2531!9.58e-07!51;DOID:0060083!9.58e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!6.90e-16!15;UBERON:0000179!6.90e-16!15;UBERON:0000463!6.90e-16!15;UBERON:0004177!5.13e-09!7;UBERON:0002106!6.45e-09!3;UBERON:0004854!6.45e-09!3;UBERON:0009034!6.45e-09!3;UBERON:0002095!6.45e-09!3;UBERON:0004782!6.45e-09!3;UBERON:0003281!6.45e-09!3;UBERON:0009664!6.45e-09!3;UBERON:0002296!6.45e-09!3;UBERON:0005602!6.45e-09!3;UBERON:0001179!6.45e-09!3;UBERON:0006293!6.45e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.04e-15;15!UBERON:0000179;1.04e-15;15!UBERON:0000463;1.04e-15;15!UBERON:0002390;2.08e-13;32!UBERON:0002193;2.53e-10;42!UBERON:0002106;6.54e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.24e-15,15;UBERON:0000179,1.24e-15,15;UBERON:0000463,1.24e-15,15;UBERON:0002106,6.89e-08,3;UBERON:0004854,6.89e-08,3;UBERON:0009034,6.89e-08,3;UBERON:0002095,6.89e-08,3;UBERON:0004782,6.89e-08,3;UBERON:0003281,6.89e-08,3;UBERON:0009664,6.89e-08,3;UBERON:0002296,6.89e-08,3;UBERON:0005602,6.89e-08,3;UBERON:0001179,6.89e-08,3;UBERON:0006293,6.89e-08,3 | |||
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| ||
|short_description=p3@IGHM | |short_description=p3@IGHM | ||
}} | }} |
Latest revision as of 21:09, 18 September 2015
Short description: | p3@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_IGHM_5end |
Coexpression cluster: | C47_CD19_Burkitt_acute_xeroderma_tonsil_lymphoma_appendix |
Association with transcript: | -170bp_to_X58529_5end |
EntrezGene: | IGHM |
HGNC: | 5541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.90e-68 | 24 |
pro-B cell | 6.90e-68 | 24 |
B cell | 4.75e-63 | 14 |
lymphocyte | 5.89e-32 | 53 |
common lymphoid progenitor | 5.89e-32 | 53 |
lymphoid lineage restricted progenitor cell | 3.99e-29 | 52 |
nongranular leukocyte | 2.32e-15 | 115 |
hematopoietic stem cell | 1.47e-12 | 168 |
leukocyte | 2.73e-12 | 136 |
hematopoietic cell | 1.17e-11 | 177 |
hematopoietic lineage restricted progenitor cell | 3.21e-10 | 120 |
hematopoietic oligopotent progenitor cell | 1.13e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.13e-09 | 161 |
precursor B cell | 7.91e-08 | 3 |
single nucleate cell | 1.37e-07 | 3 |
mononuclear cell | 1.37e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
blood | 1.24e-15 | 15 |
haemolymphatic fluid | 1.24e-15 | 15 |
organism substance | 1.24e-15 | 15 |
spleen | 6.89e-08 | 3 |
gastrointestinal system mesentery | 6.89e-08 | 3 |
stomach region | 6.89e-08 | 3 |
mesentery | 6.89e-08 | 3 |
gastrointestinal system serosa | 6.89e-08 | 3 |
mesentery of stomach | 6.89e-08 | 3 |
gut mesentery | 6.89e-08 | 3 |
dorsal mesentery | 6.89e-08 | 3 |
dorsal mesogastrium | 6.89e-08 | 3 |
peritoneal cavity | 6.89e-08 | 3 |
spleen primordium | 6.89e-08 | 3 |