FFCP PHASE1:Hg19::chr10:129847972..129847996,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr10:129847972..129847996,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_at_chr10:129847972..129847996,- | |description=CAGE_peak_at_chr10:129847972..129847996,- | ||
|id=chr10:129847972..129847996,- | |id=chr10:129847972..129847996,- | ||
|ontology_enrichment_celltype=CL:0002057!3.45e-91!42;CL:0000766!1.70e-87!76;CL:0000860!3.13e-84!45;CL:0002009!3.32e-80!65;CL:0002194!3.38e-76!63;CL:0000576!3.38e-76!63;CL:0000040!3.38e-76!63;CL:0000559!3.38e-76!63;CL:0000557!2.91e-72!71;CL:0000839!3.06e-67!70;CL:0000738!9.60e-66!140;CL:0000763!4.17e-61!112;CL:0000049!4.17e-61!112;CL:0000037!1.14e-53!172;CL:0000566!1.14e-53!172;CL:0002087!1.13e-50!119;CL:0000988!1.03e-49!182;CL:0002031!7.99e-46!124;CL:0002032!1.17e-45!165;CL:0000837!1.17e-45!165;CL:0002393!8.52e-21!9;CL:0002397!8.52e-21!9;CL:0000094!4.79e-20!8;CL:0000134!7.96e-18!358;CL:0002320!3.94e-17!365;CL:0000219!1.09e-14!390;CL:0000081!4.33e-14!11;CL:0000048!8.63e-12!430;CL:0000034!1.82e-11!444;CL:0000723!2.21e-11!436;CL:0000840!6.02e-09!5;CL:0001029!6.02e-09!5;CL:0000775!8.35e-09!3;CL:0000451!1.02e-08!10;CL:0000767!3.25e-08!3;CL:0000842!6.42e-08!3;CL:0000875!1.76e-07!3;CL:0002396!1.76e-07!3;CL:0000784!5.07e-07!3 | |ontology_enrichment_celltype=CL:0002057!3.45e-91!42;CL:0000766!1.70e-87!76;CL:0000860!3.13e-84!45;CL:0002009!3.32e-80!65;CL:0002194!3.38e-76!63;CL:0000576!3.38e-76!63;CL:0000040!3.38e-76!63;CL:0000559!3.38e-76!63;CL:0000557!2.91e-72!71;CL:0000839!3.06e-67!70;CL:0000738!9.60e-66!140;CL:0000763!4.17e-61!112;CL:0000049!4.17e-61!112;CL:0000037!1.14e-53!172;CL:0000566!1.14e-53!172;CL:0002087!1.13e-50!119;CL:0000988!1.03e-49!182;CL:0002031!7.99e-46!124;CL:0002032!1.17e-45!165;CL:0000837!1.17e-45!165;CL:0002393!8.52e-21!9;CL:0002397!8.52e-21!9;CL:0000094!4.79e-20!8;CL:0000134!7.96e-18!358;CL:0002320!3.94e-17!365;CL:0000219!1.09e-14!390;CL:0000081!4.33e-14!11;CL:0000048!8.63e-12!430;CL:0000034!1.82e-11!444;CL:0000723!2.21e-11!436;CL:0000840!6.02e-09!5;CL:0001029!6.02e-09!5;CL:0000775!8.35e-09!3;CL:0000451!1.02e-08!10;CL:0000767!3.25e-08!3;CL:0000842!6.42e-08!3;CL:0000875!1.76e-07!3;CL:0002396!1.76e-07!3;CL:0000784!5.07e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.44e-79;33!CL:0002057;1.44e-79;33!CL:0000576;3.36e-61;48!CL:0000473;8.40e-57;39!CL:0000234;8.40e-57;39!CL:0000766;3.75e-48;69!CL:0000094;5.86e-35;8!CL:0002393;8.16e-26;6!CL:0002397;8.16e-26;6!CL:0000081;4.69e-25;11!CL:0000763;5.98e-19;100!CL:0002087;1.59e-15;104!CL:0000775;1.36e-14;3!CL:0000767;1.40e-13;3!CL:0000226;6.27e-13;3!CL:0000842;6.27e-13;3!CL:0000738;7.60e-13;136!CL:0000771;2.61e-10;2!CL:0000988;1.04e-09;177!CL:0000219;3.26e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.30e-115,42;CL:0002057,3.30e-115,42;CL:0000473,7.95e-100,48;CL:0000234,7.95e-100,48;CL:0000766,1.14e-99,72;CL:0002009,4.50e-80,61;CL:0002194,2.76e-78,59;CL:0000576,2.76e-78,59;CL:0000040,2.76e-78,59;CL:0000559,2.76e-78,59;CL:0000557,2.67e-72,67;CL:0000839,2.79e-69,66;CL:0000763,3.97e-67,108;CL:0000049,3.97e-67,108;CL:0000738,6.89e-60,136;CL:0000037,7.43e-47,168;CL:0002087,3.57e-44,115;CL:0000988,4.94e-44,177;CL:0002032,2.85e-42,161;CL:0000837,2.85e-42,161;CL:0002031,4.27e-37,120;CL:0000094,6.26e-35,8;CL:0002393,4.22e-29,9;CL:0002397,4.22e-29,9;CL:0000081,4.92e-25,11;CL:0000134,1.61e-17,354;CL:0002320,5.30e-17,361;CL:0000219,3.56e-15,386;CL:0000775,1.30e-14,3;CL:0000767,1.50e-13,3;CL:0000226,5.09e-13,3;CL:0000842,5.09e-13,3;CL:0000048,6.15e-13,427;CL:0000723,1.25e-12,433;CL:0000034,3.14e-12,441;CL:0000771,2.74e-10,2 | |||
|ontology_enrichment_development_v019=CL:0002057;1.51e-82;42!CL:0000049;8.68e-17;108 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.47e-67!102;UBERON:0003061!6.47e-67!102;UBERON:0002371!2.41e-65!80;UBERON:0001474!8.70e-60!86;UBERON:0002193!1.66e-59!112;UBERON:0004765!9.13e-49!101;UBERON:0001434!9.13e-49!101;UBERON:0002405!8.38e-43!115;UBERON:0003081!3.68e-24!216;UBERON:0002204!8.16e-24!167;UBERON:0002384!6.41e-17!375 | |ontology_enrichment_uberon=UBERON:0002390!6.47e-67!102;UBERON:0003061!6.47e-67!102;UBERON:0002371!2.41e-65!80;UBERON:0001474!8.70e-60!86;UBERON:0002193!1.66e-59!112;UBERON:0004765!9.13e-49!101;UBERON:0001434!9.13e-49!101;UBERON:0002405!8.38e-43!115;UBERON:0003081!3.68e-24!216;UBERON:0002204!8.16e-24!167;UBERON:0002384!6.41e-17!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.57e-63,76;UBERON:0002390,2.10e-59,98;UBERON:0003061,2.10e-59,98;UBERON:0001474,8.86e-58,82;UBERON:0002193,3.58e-53,108;UBERON:0004765,5.44e-52,90;UBERON:0002405,4.50e-50,93;UBERON:0001434,4.82e-46,100;UBERON:0002204,1.88e-24,167;UBERON:0003081,2.05e-24,203;UBERON:0002384,2.70e-16,371;UBERON:0000926,1.07e-12,315;UBERON:0004120,1.07e-12,315;UBERON:0006603,1.07e-12,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11373559903575,3.45446458287491,4.64448369948228,0,0,0,0,0,0.880801318004542,7.75593571944628,9.22504458362652,7.37836960433896,0,0,0,0.436194716338694,0.755751887377619,1.21292030593908,2.55671940596253,1.6446715520873,3.71647645074124,6.90461741573161,3.33008918487831,5.43909128743746,5.17118521104928,1.93645405075148,2.70852973188684,3.57660445130949,0.545812300115692,2.47195832889593,5.81559395504715,3.85114832491312,5.75403413219137,0.329851300186716,0.797854630486527,1.27867425159808,3.19230162491442,1.13477044938228,0.622822248995575,6.02996796616184,3.12889751052121,7.60160956467908,2.42159801053347,2.57794345191295,2.84816148696796,3.16882929467913,4.03948169933583,2.93522103711726,12.243820794968,6.75796017786778,6.10757229448904,1.42506371870624,0.79566670879636,1.46131323011707,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0,0.398873881556595,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,38.7780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.513372145118994,0,0,0,0,0,9.73709131131337,17.9496875522415,20.3063601583657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,4.96142661882819,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.714695326373367,1.23408681925858,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.11373559903575,3.45446458287491,4.64448369948228,0,0,0,0,0,0.880801318004542,7.75593571944628,9.22504458362652,7.37836960433896,0,0,0,0.436194716338694,0.755751887377619,1.21292030593908,2.55671940596253,1.6446715520873,3.71647645074124,6.90461741573161,3.33008918487831,5.43909128743746,5.17118521104928,1.93645405075148,2.70852973188684,3.57660445130949,0.545812300115692,2.47195832889593,5.81559395504715,3.85114832491312,5.75403413219137,0.329851300186716,0.797854630486527,1.27867425159808,3.19230162491442,1.13477044938228,0.622822248995575,6.02996796616184,3.12889751052121,7.60160956467908,2.42159801053347,2.57794345191295,2.84816148696796,3.16882929467913,4.03948169933583,2.93522103711726,12.243820794968,6.75796017786778,6.10757229448904,1.42506371870624,0.79566670879636,1.46131323011707,0,0,0,0.853460445133014,0,0.574752439954483,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.752875595388864,0,0,0,0,0,0,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0.0654895377488563,0,0,0.324547393654683,0,0.398873881556595,0.715471872916026,0.571994910780128,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,38.7780264148325,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468008530278475,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.513372145118994,0,0,0,0,0,9.73709131131337,17.9496875522415,20.3063601583657,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.68798433959754,4.96142661882819,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0.507447609232169,0,0,0.714695326373367,1.23408681925858,0,0.540031437238115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0.223676107892416,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0679697329768317,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103432995861895,0,0,0.0645889098360061,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr10:129847972..129847996,- | |short_description=p@chr10:129847972..129847996,- | ||
}} | }} |
Latest revision as of 11:37, 23 July 2015
Short description: | p@chr10:129847972..129847996, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:129847972..129847996, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.57e-63 | 76 |
hematopoietic system | 2.10e-59 | 98 |
blood island | 2.10e-59 | 98 |
bone element | 8.86e-58 | 82 |
hemolymphoid system | 3.58e-53 | 108 |
skeletal element | 5.44e-52 | 90 |
immune system | 4.50e-50 | 93 |
skeletal system | 4.82e-46 | 100 |
musculoskeletal system | 1.88e-24 | 167 |
lateral plate mesoderm | 2.05e-24 | 203 |
connective tissue | 2.70e-16 | 371 |
mesoderm | 1.07e-12 | 315 |
mesoderm-derived structure | 1.07e-12 | 315 |
presumptive mesoderm | 1.07e-12 | 315 |