FFCP PHASE1:Mm9::chr5:121835608..121835628,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=231712 | |EntrezGene=231712 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q3UDK1 | |UniProt=Q3UDK1 | ||
|association_with_transcript=0bp_to_NM_001163470,NM_172275,uc008ziy.2,uc008ziz.2_5end | |association_with_transcript=0bp_to_NM_001163470,NM_172275,uc008ziy.2,uc008ziz.2_5end | ||
|cluster_id=chr5:121835608..121835628,- | |||
|description=CAGE_peak_3_at_Trafd1_5end | |description=CAGE_peak_3_at_Trafd1_5end | ||
|id=chr5:121835608..121835628,- | |id=chr5:121835608..121835628,- | ||
|ontology_enrichment_celltype=CL:0000117!2.20e-09!23;CL:0000337!2.20e-09!23;CL:0000221!4.07e-08!44;CL:0000133!4.07e-08!44;CL:0002319!6.21e-08!43;CL:0000540!2.40e-07!33;CL:0000047!2.40e-07!33;CL:0000031!2.40e-07!33;CL:0000404!2.40e-07!33;CL:0000055!6.02e-07!50;CL:0000393!8.15e-07!39;CL:0000211!8.15e-07!39 | |ontology_enrichment_celltype=CL:0000117!2.20e-09!23;CL:0000337!2.20e-09!23;CL:0000221!4.07e-08!44;CL:0000133!4.07e-08!44;CL:0002319!6.21e-08!43;CL:0000540!2.40e-07!33;CL:0000047!2.40e-07!33;CL:0000031!2.40e-07!33;CL:0000404!2.40e-07!33;CL:0000055!6.02e-07!50;CL:0000393!8.15e-07!39;CL:0000211!8.15e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.09e-09,23;CL:0000337,2.09e-09,23;CL:0000221,3.90e-08,44;CL:0000133,3.90e-08,44;CL:0002319,5.95e-08,43;CL:0000540,2.31e-07,33;CL:0000047,2.31e-07,33;CL:0000031,2.31e-07,33;CL:0000404,2.31e-07,33;CL:0000393,7.86e-07,39;CL:0000211,7.86e-07,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.22e-17!73;UBERON:0005743!9.22e-17!73;UBERON:0000073!3.16e-16!75;UBERON:0001016!3.16e-16!75;UBERON:0001049!3.66e-16!52;UBERON:0005068!3.66e-16!52;UBERON:0006241!3.66e-16!52;UBERON:0007135!3.66e-16!52;UBERON:0002020!9.91e-16!34;UBERON:0000955!3.29e-15!50;UBERON:0006238!3.29e-15!50;UBERON:0002616!1.18e-14!49;UBERON:0000033!2.43e-14!63;UBERON:0002346!3.46e-14!71;UBERON:0003075!3.46e-14!71;UBERON:0007284!3.46e-14!71;UBERON:0002791!6.89e-14!29;UBERON:0003528!6.89e-14!29;UBERON:0001893!6.89e-14!29;UBERON:0002780!9.79e-14!39;UBERON:0001890!9.79e-14!39;UBERON:0006240!9.79e-14!39;UBERON:0003080!2.35e-13!40;UBERON:0004121!5.65e-13!102;UBERON:0000924!5.65e-13!102;UBERON:0006601!5.65e-13!102;UBERON:0003056!6.75e-12!49;UBERON:0000956!1.98e-11!21;UBERON:0001869!1.98e-11!21;UBERON:0000203!1.98e-11!21;UBERON:0002619!5.30e-09!17;UBERON:0000025!8.14e-09!114;UBERON:0007811!1.76e-08!86;UBERON:0000153!2.25e-08!94;UBERON:0004111!3.64e-08!122;UBERON:0002021!7.19e-07!10;UBERON:0000411!7.19e-07!10;UBERON:0001950!7.19e-07!10 | |ontology_enrichment_uberon=UBERON:0001017!9.22e-17!73;UBERON:0005743!9.22e-17!73;UBERON:0000073!3.16e-16!75;UBERON:0001016!3.16e-16!75;UBERON:0001049!3.66e-16!52;UBERON:0005068!3.66e-16!52;UBERON:0006241!3.66e-16!52;UBERON:0007135!3.66e-16!52;UBERON:0002020!9.91e-16!34;UBERON:0000955!3.29e-15!50;UBERON:0006238!3.29e-15!50;UBERON:0002616!1.18e-14!49;UBERON:0000033!2.43e-14!63;UBERON:0002346!3.46e-14!71;UBERON:0003075!3.46e-14!71;UBERON:0007284!3.46e-14!71;UBERON:0002791!6.89e-14!29;UBERON:0003528!6.89e-14!29;UBERON:0001893!6.89e-14!29;UBERON:0002780!9.79e-14!39;UBERON:0001890!9.79e-14!39;UBERON:0006240!9.79e-14!39;UBERON:0003080!2.35e-13!40;UBERON:0004121!5.65e-13!102;UBERON:0000924!5.65e-13!102;UBERON:0006601!5.65e-13!102;UBERON:0003056!6.75e-12!49;UBERON:0000956!1.98e-11!21;UBERON:0001869!1.98e-11!21;UBERON:0000203!1.98e-11!21;UBERON:0002619!5.30e-09!17;UBERON:0000025!8.14e-09!114;UBERON:0007811!1.76e-08!86;UBERON:0000153!2.25e-08!94;UBERON:0004111!3.64e-08!122;UBERON:0002021!7.19e-07!10;UBERON:0000411!7.19e-07!10;UBERON:0001950!7.19e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.33e-17,73;UBERON:0000073,1.20e-16,54;UBERON:0001016,2.86e-16,75;UBERON:0001049,3.32e-16,52;UBERON:0005068,3.32e-16,52;UBERON:0006241,3.32e-16,52;UBERON:0007135,3.32e-16,52;UBERON:0010314,3.48e-16,92;UBERON:0002020,9.01e-16,34;UBERON:0002346,4.15e-15,64;UBERON:0003075,4.15e-15,64;UBERON:0007284,4.15e-15,64;UBERON:0000955,5.51e-15,47;UBERON:0006238,5.51e-15,47;UBERON:0002616,2.00e-14,46;UBERON:0003528,6.34e-14,29;UBERON:0002791,6.34e-14,29;UBERON:0001893,6.34e-14,29;UBERON:0002780,9.02e-14,39;UBERON:0001890,9.02e-14,39;UBERON:0006240,9.02e-14,39;UBERON:0004121,2.00e-13,95;UBERON:0000924,2.00e-13,95;UBERON:0006601,2.00e-13,95;UBERON:0003080,2.17e-13,40;UBERON:0010371,9.38e-13,73;UBERON:0003056,5.60e-12,49;UBERON:0000956,1.85e-11,21;UBERON:0001869,1.85e-11,21;UBERON:0000203,1.85e-11,21;UBERON:0002619,5.04e-09,17;UBERON:0000025,1.01e-08,114;UBERON:0004111,4.48e-08,122;UBERON:0002021,6.94e-07,10;UBERON:0000411,6.94e-07,10;UBERON:0001950,6.94e-07,10 | |||
|phase1_expression=3.36312578920067,0,2.27499619694768,0.90739263392049,0.500895729946347,1.84667199103079,1.16806320297763,1.42035655785734,0.422366166455,0.234064526321993,0,0.239316476986009,2.05440875917447,1.22388563386596,0.999329285446988,0.607425802169478,1.39912375625629,2.20823515750766,2.60517423850904,1.69755860719212,3.31668831589172,2.38298282882125,1.82839852397255,1.11994695955385,1.14704640533585,1.72269589234506,1.29228598847722,0.861884930743556,0.950117097281869,0.252030129759931,0.443461021310609,0.635030673459631,0.61506478758457,0,0.866554859253824,0.831173226792462,1.02084678131185,4.60384793810598,0.7813353445238,6.28228492768558,2.35292595212406,2.73218193983378,3.39857247121808,1.6366586336825,2.73717714292689,2.9367480345869,9.38869613217647,3.48840250208714,3.95435128922049,3.69416808241138,3.49966054063406,1.43752564364972,3.18786951509699,2.17608642603403,2.01656279485478,2.82985379639542,2.29226751951005,2.06268836910977,8.29497489524351,8.99284664762456,5.70448263155561,5.08266798103698,2.66788438833342,2.6996991518442,2.96659908770092,7.8152812644071,2.39680088414724,2.68952813725088,5.80661828927475,7.02030879324791,6.09942387919008,4.57041575046086,3.97563373712904,4.77714116938321,6.70918297127655,2.75765635983006,2.20231761998777,3.57524546638526,3.37934373163736,8.83638127792299,9.42322729104819,5.73004707612436,3.07101298901519,2.8138130501584,2.29197371665215,2.94628585473668,5.12538050876771,4.10078780815661,2.27178579999552,1.81371744256285,2.31891590961342,0.860423876981386,0,0.539703191637817,0,0.896053774194671,2.24711072210803,3.40860645156115,3.63700406444016,1.7666978725517,3.23939865486365,3.84979432242953,0,7.11066703153331,1.5154372870785,0.506719730950197,1.01104889002957,0.45673551887624,2.07150306917737,1.33597925158342,3.29622120855658,2.74018930480927,1.84492397804847,3.61734337326294,2.82212897125692,1.25666591329675,2.47194967734374,1.15679485535929,0.884610551949874,1.94120219936891,1.76673214768315,0.969750506270444,0,5.5628351432194,3.77004072264219,0.766371165625774,1.43778149407104,1.79970819298022,1.90605340609597,2.09706895166752,3.66000482254901,5.6544458450789,5.56237824615285,4.85859368927628,3.1168206683934,2.75810147215188,2.74966282395854,1.7416975885413,1.26361379216837,0.420883711772948,2.08192708740326,2.75882525320168,3.78130472591233,2.56198190320716,2.58538696775046,3.20284300712124,3.27956035959051,1.29351685369508,3.23351989399263,2.64748512234947,2.11141348996739,2.84954452155847,1.66828349535359,1.74126083261083,3.49829631893504,3.18454826909589,2.1066395619397,0.257347907114715,1.42081749697796,4.97101854085205,2.81431271977315,3.6012412292203,4.02466050494857,4.52557733019029,2.62254091908543,0.930135779001631,2.14618721119695,5.3712057488898,4.11399624783701,3.77585167381919,2.99954595319666,2.33919979880532,1.75640092232841,2.28150911892632,2.94405927989778,6.27718135513635,1.65209391491899,0.528901133327089,3.19932375802851,3.71578674976702,2.70621668776396,1.81515172161008,3.11329261382818,1.71203063501303,0.474529061544512,0.988193728344065,3.51869292320377,3.38226002469956,1.55971269695296,2.69645822596266,1.72910439899755,1.39398891278057,2.46568271239006,2.51346727741403,0,1.4255592949172,0.969762435838129,2.80543279561274,2.08680572510049,0.738050739898011,1.56998727841375,0.740382983530803,0.296452627087149,1.83529616287703,1.17935397067922,2.47348323623339,1.21716072833102,0.72353147925725,1.01850340712568,0.863088412352432,1.29708181420028,1.37280706594041,1.43768206527355,2.23284568601102,1.5601883655728,1.51547326768267,1.25578189465339,0.964887042726734,2.77129785249907,4.9267767060326,4.4000543639347,2.71592137240301,2.11221223459652,3.51763140627813,2.61848004974615,3.51240566144038,4.57141917907954,3.5434350343804,4.14582398509466,4.58817281204066,3.7990696010497,3.47157740595628,1.50791283939272,1.08781136763742,0.491764273019036,1.10374698521893,1.9266070798535,2.10981035865966,1.80328439914343,1.51482556322624,1.89304931649754,3.90438744296638,3.23135096599198,2.38968797952552,2.00518806674155,1.41538265394416,2.02405350837447,2.33804686329049,1.58115111178609,5.46246237917072,1.13552068166615,4.27357448801413,4.23506094319298,0.989820737835213,0,2.42780636154981,3.32555912661226,1.32023555829129,1.18120757152309,1.22974059177571,3.10113951801865,1.45413491791002,2.49548164869305,0.948110273807448,1.05418608574999,0,1.70219802876894,3.78128297465751,3.23396709456886,2.14337035031592,2.6601035046341,3.92411398724555,2.96188237083818,3.04464949114599,0.469343416127421,2.33015277950202,1.32317038832977,1.15420377059036,2.09903754704677,1.99032652262914,2.74556391207214,1.96969079694074,1.7488850197791,2.41052892613663,2.05045056957423,3.30218988741156,1.11116716421827,1.50694765603753,0.956859594047176,0.686334519619568,1.5298058699447,1.25956307091292,1.65839968565309,0.954670618015114,2.84702394223022,1.42323626988794,1.94409613479242,1.46361807210128,2.40198820120795,2.42755823492677,2.39695021603474,1.5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|phase1_expression=3.36312578920067,0,2.27499619694768,0.90739263392049,0.500895729946347,1.84667199103079,1.16806320297763,1.42035655785734,0.422366166455,0.234064526321993,0,0.239316476986009,2.05440875917447,1.22388563386596,0.999329285446988,0.607425802169478,1.39912375625629,2.20823515750766,2.60517423850904,1.69755860719212,3.31668831589172,2.38298282882125,1.82839852397255,1.11994695955385,1.14704640533585,1.72269589234506,1.29228598847722,0.861884930743556,0.950117097281869,0.252030129759931,0.443461021310609,0.635030673459631,0.61506478758457,0,0.866554859253824,0.831173226792462,1.02084678131185,4.60384793810598,0.7813353445238,6.28228492768558,2.35292595212406,2.73218193983378,3.39857247121808,1.6366586336825,2.73717714292689,2.9367480345869,9.38869613217647,3.48840250208714,3.95435128922049,3.69416808241138,3.49966054063406,1.43752564364972,3.18786951509699,2.17608642603403,2.01656279485478,2.82985379639542,2.29226751951005,2.06268836910977,8.29497489524351,8.99284664762456,5.70448263155561,5.08266798103698,2.66788438833342,2.6996991518442,2.96659908770092,7.8152812644071,2.39680088414724,2.68952813725088,5.80661828927475,7.02030879324791,6.09942387919008,4.57041575046086,3.97563373712904,4.77714116938321,6.70918297127655,2.75765635983006,2.20231761998777,3.57524546638526,3.37934373163736,8.83638127792299,9.42322729104819,5.73004707612436,3.07101298901519,2.8138130501584,2.29197371665215,2.94628585473668,5.12538050876771,4.10078780815661,2.27178579999552,1.81371744256285,2.31891590961342,0.860423876981386,0,0.539703191637817,0,0.896053774194671,2.24711072210803,3.40860645156115,3.63700406444016,1.7666978725517,3.23939865486365,3.84979432242953,0,7.11066703153331,1.5154372870785,0.506719730950197,1.01104889002957,0.45673551887624,2.07150306917737,1.33597925158342,3.29622120855658,2.74018930480927,1.84492397804847,3.61734337326294,2.82212897125692,1.25666591329675,2.47194967734374,1.15679485535929,0.884610551949874,1.94120219936891,1.76673214768315,0.969750506270444,0,5.5628351432194,3.77004072264219,0.766371165625774,1.43778149407104,1.79970819298022,1.90605340609597,2.09706895166752,3.66000482254901,5.6544458450789,5.56237824615285,4.85859368927628,3.1168206683934,2.75810147215188,2.74966282395854,1.7416975885413,1.26361379216837,0.420883711772948,2.08192708740326,2.75882525320168,3.78130472591233,2.56198190320716,2.58538696775046,3.20284300712124,3.27956035959051,1.29351685369508,3.23351989399263,2.64748512234947,2.11141348996739,2.84954452155847,1.66828349535359,1.74126083261083,3.49829631893504,3.18454826909589,2.1066395619397,0.257347907114715,1.42081749697796,4.97101854085205,2.81431271977315,3.6012412292203,4.02466050494857,4.52557733019029,2.62254091908543,0.930135779001631,2.14618721119695,5.3712057488898,4.11399624783701,3.77585167381919,2.99954595319666,2.33919979880532,1.75640092232841,2.28150911892632,2.94405927989778,6.27718135513635,1.65209391491899,0.528901133327089,3.19932375802851,3.71578674976702,2.70621668776396,1.81515172161008,3.11329261382818,1.71203063501303,0.474529061544512,0.988193728344065,3.51869292320377,3.38226002469956,1.55971269695296,2.69645822596266,1.72910439899755,1.39398891278057,2.46568271239006,2.51346727741403,0,1.4255592949172,0.969762435838129,2.80543279561274,2.08680572510049,0.738050739898011,1.56998727841375,0.740382983530803,0.296452627087149,1.83529616287703,1.17935397067922,2.47348323623339,1.21716072833102,0.72353147925725,1.01850340712568,0.863088412352432,1.29708181420028,1.37280706594041,1.43768206527355,2.23284568601102,1.5601883655728,1.51547326768267,1.25578189465339,0.964887042726734,2.77129785249907,4.9267767060326,4.4000543639347,2.71592137240301,2.11221223459652,3.51763140627813,2.61848004974615,3.51240566144038,4.57141917907954,3.5434350343804,4.14582398509466,4.58817281204066,3.7990696010497,3.47157740595628,1.50791283939272,1.08781136763742,0.491764273019036,1.10374698521893,1.9266070798535,2.10981035865966,1.80328439914343,1.51482556322624,1.89304931649754,3.90438744296638,3.23135096599198,2.38968797952552,2.00518806674155,1.41538265394416,2.02405350837447,2.33804686329049,1.58115111178609,5.46246237917072,1.13552068166615,4.27357448801413,4.23506094319298,0.989820737835213,0,2.42780636154981,3.32555912661226,1.32023555829129,1.18120757152309,1.22974059177571,3.10113951801865,1.45413491791002,2.49548164869305,0.948110273807448,1.05418608574999,0,1.70219802876894,3.78128297465751,3.23396709456886,2.14337035031592,2.6601035046341,3.92411398724555,2.96188237083818,3.04464949114599,0.469343416127421,2.33015277950202,1.32317038832977,1.15420377059036,2.09903754704677,1.99032652262914,2.74556391207214,1.96969079694074,1.7488850197791,2.41052892613663,2.05045056957423,3.30218988741156,1.11116716421827,1.50694765603753,0.956859594047176,0.686334519619568,1.5298058699447,1.25956307091292,1.65839968565309,0.954670618015114,2.84702394223022,1.42323626988794,1.94409613479242,1.46361807210128,2.40198820120795,2.42755823492677,2.39695021603474,1.5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| ||
|short_description=p3@Trafd1 | |short_description=p3@Trafd1 | ||
}} | }} |
Latest revision as of 19:27, 1 October 2015
Short description: | p3@Trafd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trafd1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001163470, NM_172275, uc008ziy.2, uc008ziz.2_5end |
EntrezGene: | Trafd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.09e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.09e-09 | 23 |
ectodermal cell | 3.90e-08 | 44 |
neurectodermal cell | 3.90e-08 | 44 |
neural cell | 5.95e-08 | 43 |
neuron | 2.31e-07 | 33 |
neuronal stem cell | 2.31e-07 | 33 |
neuroblast | 2.31e-07 | 33 |
electrically signaling cell | 2.31e-07 | 33 |
electrically responsive cell | 7.86e-07 | 39 |
electrically active cell | 7.86e-07 | 39 |