FFCP PHASE1:Mm9::chr5:117565918..117565967,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71954 | |EntrezGene=71954 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8BR65 | |UniProt=Q8BR65 | ||
|association_with_transcript=34bp_to_ENSMUST00000086471,ENSMUST00000166397,NM_001122666,NM_178622,uc008zff.2,uc008zfg.2_5end | |association_with_transcript=34bp_to_ENSMUST00000086471,ENSMUST00000166397,NM_001122666,NM_178622,uc008zff.2,uc008zfg.2_5end | ||
|cluster_id=chr5:117565918..117565967,- | |||
|description=CAGE_peak_1_at_Suds3_5end | |description=CAGE_peak_1_at_Suds3_5end | ||
|id=chr5:117565918..117565967,- | |id=chr5:117565918..117565967,- | ||
|ontology_enrichment_celltype=CL:0002321!1.04e-13!70;CL:0000220!1.04e-13!70;CL:0000066!1.37e-12!25;CL:0000223!2.29e-10!20;CL:0002076!7.70e-09!15;CL:0002371!5.22e-08!118;CL:0000117!6.27e-08!23;CL:0000337!6.27e-08!23;CL:0000144!1.78e-07!121;CL:0000012!1.78e-07!121;CL:0000548!1.95e-07!115;CL:0000004!1.95e-07!115;CL:0000255!1.95e-07!115;CL:0002563!4.66e-07!9;CL:0002251!4.66e-07!9 | |ontology_enrichment_celltype=CL:0002321!1.04e-13!70;CL:0000220!1.04e-13!70;CL:0000066!1.37e-12!25;CL:0000223!2.29e-10!20;CL:0002076!7.70e-09!15;CL:0002371!5.22e-08!118;CL:0000117!6.27e-08!23;CL:0000337!6.27e-08!23;CL:0000144!1.78e-07!121;CL:0000012!1.78e-07!121;CL:0000548!1.95e-07!115;CL:0000004!1.95e-07!115;CL:0000255!1.95e-07!115;CL:0002563!4.66e-07!9;CL:0002251!4.66e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002321,1.04e-13,70;CL:0000066,1.37e-12,25;CL:0000223,2.29e-10,20;CL:0002076,7.70e-09,15;CL:0000117,6.27e-08,23;CL:0000337,6.27e-08,23;CL:0002563,4.66e-07,9;CL:0002251,4.66e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!4.63e-09!34;UBERON:0000344!1.64e-08!15;UBERON:0001049!5.43e-08!52;UBERON:0005068!5.43e-08!52;UBERON:0006241!5.43e-08!52;UBERON:0007135!5.43e-08!52;UBERON:0001242!7.61e-08!13;UBERON:0000060!7.61e-08!13;UBERON:0001262!7.61e-08!13;UBERON:0004786!7.61e-08!13;UBERON:0002791!2.19e-07!29;UBERON:0003528!2.19e-07!29;UBERON:0001893!2.19e-07!29;UBERON:0000485!3.10e-07!11;UBERON:0003350!4.66e-07!9;UBERON:0004808!4.66e-07!9;UBERON:0001277!4.66e-07!9;UBERON:0002616!6.10e-07!49;UBERON:0000955!7.03e-07!50;UBERON:0006238!7.03e-07!50;UBERON:0002780!7.73e-07!39;UBERON:0001890!7.73e-07!39;UBERON:0006240!7.73e-07!39;UBERON:0000073!8.44e-07!75;UBERON:0001016!8.44e-07!75 | |ontology_enrichment_uberon=UBERON:0002020!4.63e-09!34;UBERON:0000344!1.64e-08!15;UBERON:0001049!5.43e-08!52;UBERON:0005068!5.43e-08!52;UBERON:0006241!5.43e-08!52;UBERON:0007135!5.43e-08!52;UBERON:0001242!7.61e-08!13;UBERON:0000060!7.61e-08!13;UBERON:0001262!7.61e-08!13;UBERON:0004786!7.61e-08!13;UBERON:0002791!2.19e-07!29;UBERON:0003528!2.19e-07!29;UBERON:0001893!2.19e-07!29;UBERON:0000485!3.10e-07!11;UBERON:0003350!4.66e-07!9;UBERON:0004808!4.66e-07!9;UBERON:0001277!4.66e-07!9;UBERON:0002616!6.10e-07!49;UBERON:0000955!7.03e-07!50;UBERON:0006238!7.03e-07!50;UBERON:0002780!7.73e-07!39;UBERON:0001890!7.73e-07!39;UBERON:0006240!7.73e-07!39;UBERON:0000073!8.44e-07!75;UBERON:0001016!8.44e-07!75 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,4.63e-09,34;UBERON:0000344,1.64e-08,15;UBERON:0000073,1.79e-08,54;UBERON:0001049,5.43e-08,52;UBERON:0005068,5.43e-08,52;UBERON:0006241,5.43e-08,52;UBERON:0007135,5.43e-08,52;UBERON:0001242,7.61e-08,13;UBERON:0001262,7.61e-08,13;UBERON:0004786,7.61e-08,13;UBERON:0003528,2.19e-07,29;UBERON:0002791,2.19e-07,29;UBERON:0001893,2.19e-07,29;UBERON:0000485,3.10e-07,11;UBERON:0003350,4.66e-07,9;UBERON:0004808,4.66e-07,9;UBERON:0001277,4.66e-07,9;UBERON:0002780,7.73e-07,39;UBERON:0001890,7.73e-07,39;UBERON:0006240,7.73e-07,39;UBERON:0001016,8.44e-07,75;UBERON:0002616,8.91e-07,46 | |||
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| ||
|short_description=p1@Suds3 | |short_description=p1@Suds3 | ||
}} | }} |
Latest revision as of 18:05, 1 October 2015
Short description: | p1@Suds3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Suds3_5end |
Coexpression cluster: | NA |
Association with transcript: | 34bp_to_ENSMUST00000086471, ENSMUST00000166397, NM_001122666, NM_178622, uc008zff.2, uc008zfg.2_5end |
EntrezGene: | Suds3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 1.04e-13 | 70 |
epithelial cell | 1.37e-12 | 25 |
endodermal cell | 2.29e-10 | 20 |
endo-epithelial cell | 7.70e-09 | 15 |
CNS neuron (sensu Vertebrata) | 6.27e-08 | 23 |
neuroblast (sensu Vertebrata) | 6.27e-08 | 23 |
intestinal epithelial cell | 4.66e-07 | 9 |
epithelial cell of alimentary canal | 4.66e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
gray matter | 4.63e-09 | 34 |
mucosa | 1.64e-08 | 15 |
regional part of nervous system | 1.79e-08 | 54 |
neural tube | 5.43e-08 | 52 |
neural rod | 5.43e-08 | 52 |
future spinal cord | 5.43e-08 | 52 |
neural keel | 5.43e-08 | 52 |
intestinal mucosa | 7.61e-08 | 13 |
wall of intestine | 7.61e-08 | 13 |
gastrointestinal system mucosa | 7.61e-08 | 13 |
brain grey matter | 2.19e-07 | 29 |
regional part of telencephalon | 2.19e-07 | 29 |
telencephalon | 2.19e-07 | 29 |
simple columnar epithelium | 3.10e-07 | 11 |
epithelium of mucosa | 4.66e-07 | 9 |
gastrointestinal system epithelium | 4.66e-07 | 9 |
intestinal epithelium | 4.66e-07 | 9 |
regional part of forebrain | 7.73e-07 | 39 |
forebrain | 7.73e-07 | 39 |
future forebrain | 7.73e-07 | 39 |
nervous system | 8.44e-07 | 75 |
regional part of brain | 8.91e-07 | 46 |