FFCP PHASE1:Hg19::chr13:74071833..74071844,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:74071833..74071844,+ | |||
|coexpression_cluster_id=C186 | |||
|description=CAGE_peak_at_chr13:74071833..74071844,+ | |description=CAGE_peak_at_chr13:74071833..74071844,+ | ||
|id=chr13:74071833..74071844,+ | |id=chr13:74071833..74071844,+ | ||
|ontology_enrichment_celltype=CL:0000068!9.11e-19!3;CL:0000069!9.11e-19!3;CL:0000307!9.11e-19!3;CL:0000377!9.11e-19!3;CL:0002076!1.94e-17!43;CL:0002368!6.81e-16!13;CL:0000223!2.53e-14!59;CL:0000066!8.27e-12!254;CL:0002202!6.37e-11!9;CL:0002632!6.37e-11!9;CL:0000076!5.77e-08!62;CL:1001319!3.41e-07!1;CL:1000600!3.41e-07!1;CL:0000244!3.74e-07!4;CL:0000731!3.74e-07!4;CL:0002251!6.96e-07!21;CL:0002327!9.38e-07!4 | |ontology_enrichment_celltype=CL:0000068!9.11e-19!3;CL:0000069!9.11e-19!3;CL:0000307!9.11e-19!3;CL:0000377!9.11e-19!3;CL:0002076!1.94e-17!43;CL:0002368!6.81e-16!13;CL:0000223!2.53e-14!59;CL:0000066!8.27e-12!254;CL:0002202!6.37e-11!9;CL:0002632!6.37e-11!9;CL:0000076!5.77e-08!62;CL:1001319!3.41e-07!1;CL:1000600!3.41e-07!1;CL:0000244!3.74e-07!4;CL:0000731!3.74e-07!4;CL:0002251!6.96e-07!21;CL:0002327!9.38e-07!4 | ||
|ontology_enrichment_celltype_v019=CL:0000317;1.21e-13;2!CL:1000448;1.21e-13;2!CL:0002308;1.21e-13;2!CL:0002140;1.21e-13;2!CL:0000307;1.53e-09;3!CL:0000244;1.80e-07;4!CL:0000731;1.80e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0000317,1.21e-13,2;CL:1000448,1.21e-13,2;CL:0002308,1.21e-13,2;CL:0002140,1.21e-13,2;CL:0000076,4.33e-10,63;CL:0000068,1.81e-09,3;CL:0000069,1.81e-09,3;CL:0000307,1.81e-09,3;CL:0000377,1.81e-09,3;CL:0000244,1.59e-07,4;CL:0000731,1.59e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000377;1.53e-09;3 | |||
|ontology_enrichment_disease=DOID:1749!1.24e-26!14;DOID:3151!1.06e-07!1;DOID:3149!1.06e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.04e-28;14!DOID:3151;2.78e-26;1!DOID:3149;2.78e-26;1!DOID:3451;7.30e-14;2!DOID:4159;7.30e-14;2!DOID:0060122;7.30e-14;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,1.04e-28,14;DOID:3151,2.78e-26,1;DOID:3149,2.78e-26,1;DOID:3451,7.30e-14,2;DOID:4159,7.30e-14,2;DOID:0060122,7.30e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0003343!6.39e-24!4;UBERON:0004785!6.39e-24!4;UBERON:0003729!3.48e-19!5;UBERON:0000344!4.02e-17!12;UBERON:0000974!1.83e-14!10;UBERON:0000365!1.39e-11!5;UBERON:0005910!9.92e-10!6;UBERON:0001004!2.19e-09!72;UBERON:0004119!1.66e-08!169;UBERON:0000925!1.66e-08!169;UBERON:0006595!1.66e-08!169;UBERON:0003126!2.51e-08!7;UBERON:0001005!2.51e-08!7;UBERON:0000065!1.94e-07!53;UBERON:0000997!1.97e-07!1;UBERON:0005056!1.97e-07!1;UBERON:0000161!2.25e-07!35;UBERON:0004645!3.41e-07!1;UBERON:0001256!3.41e-07!1;UBERON:0001259!3.41e-07!1;UBERON:0007196!4.74e-07!14;UBERON:0001558!4.74e-07!14;UBERON:0002372!4.89e-07!1;UBERON:0001961!4.89e-07!1;UBERON:0001744!4.89e-07!1;UBERON:0001735!4.89e-07!1;UBERON:0000166!8.24e-07!21;UBERON:0001911!9.38e-07!4;UBERON:0005333!9.38e-07!4;UBERON:0008425!9.38e-07!4;UBERON:0005311!9.38e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0002419;1.21e-13;2!UBERON:0007771;1.21e-13;2!UBERON:0003297;1.21e-13;2!UBERON:0001821;1.21e-13;2!UBERON:0003487;1.21e-13;2!UBERON:0001820;1.21e-13;2!UBERON:0000014;1.40e-07;4!UBERON:0003343;1.80e-07;4!UBERON:0004785;1.80e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002419,1.21e-13,2;UBERON:0007771,1.21e-13,2;UBERON:0003297,1.21e-13,2;UBERON:0001821,1.21e-13,2;UBERON:0003487,1.21e-13,2;UBERON:0001820,1.21e-13,2;UBERON:0005089,1.21e-13,2;UBERON:0005088,1.21e-13,2;UBERON:0000014,1.40e-07,4;UBERON:0003343,1.92e-07,4;UBERON:0004785,1.92e-07,4 | |||
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|short_description=p@chr13:74071833..74071844,+ | |short_description=p@chr13:74071833..74071844,+ | ||
}} | }} |
Latest revision as of 17:02, 24 July 2015
Short description: | p@chr13:74071833..74071844, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:74071833..74071844, + |
Coexpression cluster: | C186_squamous_papillotubular_large_Tracheal_oral_Small_epidermoid |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
sebum secreting cell | 1.21e-13 | 2 |
epithelial cell of sweat gland | 1.21e-13 | 2 |
epithelial cell of skin gland | 1.21e-13 | 2 |
acinar cell of sebaceous gland | 1.21e-13 | 2 |
squamous epithelial cell | 4.33e-10 | 63 |
duct epithelial cell | 1.81e-09 | 3 |
branched duct epithelial cell | 1.81e-09 | 3 |
tracheal epithelial cell | 1.81e-09 | 3 |
tracheoblast | 1.81e-09 | 3 |
transitional epithelial cell | 1.59e-07 | 4 |
urothelial cell | 1.59e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
skin gland | 1.21e-13 | 2 |
epidermis gland | 1.21e-13 | 2 |
gland of integumental system | 1.21e-13 | 2 |
sebaceous gland | 1.21e-13 | 2 |
skin sebaceous gland | 1.21e-13 | 2 |
sweat gland | 1.21e-13 | 2 |
sweat gland placode | 1.21e-13 | 2 |
sebaceous gland placode | 1.21e-13 | 2 |
zone of skin | 1.40e-07 | 4 |
mucosa of oral region | 1.92e-07 | 4 |
respiratory system mucosa | 1.92e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 1.04e-28 | 14 |
skin squamous cell carcinoma | 2.78e-26 | 1 |
keratoacanthoma | 2.78e-26 | 1 |
skin carcinoma | 7.30e-14 | 2 |
skin cancer | 7.30e-14 | 2 |
integumentary system cancer | 7.30e-14 | 2 |