FFCP PHASE1:Hg19::chr13:70823810..70823813,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:70823810..70823813,+ | |||
|coexpression_cluster_id=C330 | |||
|description=CAGE_peak_at_chr13:70823810..70823813,+ | |description=CAGE_peak_at_chr13:70823810..70823813,+ | ||
|id=chr13:70823810..70823813,+ | |id=chr13:70823810..70823813,+ | ||
|ontology_enrichment_celltype=CL:0002322!1.37e-11!5;CL:0000708!8.38e-10!3;CL:0000322!1.18e-09!3;CL:0002573!1.46e-09!2;CL:0002618!6.30e-09!3;CL:0000342!7.26e-08!1;CL:0002565!7.26e-08!1;CL:0000167!1.39e-07!1;CL:0000164!1.39e-07!1;CL:0000502!1.39e-07!1;CL:0000172!1.39e-07!1;CL:0000173!1.39e-07!1;CL:0002351!1.39e-07!1 | |ontology_enrichment_celltype=CL:0002322!1.37e-11!5;CL:0000708!8.38e-10!3;CL:0000322!1.18e-09!3;CL:0002573!1.46e-09!2;CL:0002618!6.30e-09!3;CL:0000342!7.26e-08!1;CL:0002565!7.26e-08!1;CL:0000167!1.39e-07!1;CL:0000164!1.39e-07!1;CL:0000502!1.39e-07!1;CL:0000172!1.39e-07!1;CL:0000173!1.39e-07!1;CL:0002351!1.39e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000322;2.62e-23;3!CL:0000082;4.91e-15;19!CL:0002202;1.04e-08;9!CL:0002632;1.04e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000322,2.62e-23,3;CL:0000082,4.91e-15,19;CL:0002202,1.04e-08,9;CL:0002632,1.04e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.83e-14;5!UBERON:0008947;2.96e-10;29!UBERON:0001041;5.96e-10;30 | |||
|ontology_enrichment_disease=DOID:3112!1.01e-07!1;DOID:4430!1.39e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:3908;2.19e-53;5!DOID:3910;3.61e-34;2!DOID:3905;2.66e-30;9!DOID:4556;3.27e-23;3!DOID:1324;1.04e-18;15!DOID:0050615;1.27e-17;16!DOID:1325;8.16e-11;7!DOID:3904;8.16e-11;7 | |||
|ontology_enrichment_disease_v019_2=DOID:3908,2.19e-53,5;DOID:3910,3.61e-34,2;DOID:3905,2.66e-30,9;DOID:4556,3.27e-23,3;DOID:1324,1.04e-18,15;DOID:0050615,1.27e-17,16;DOID:1325,8.16e-11,7;DOID:3904,8.16e-11,7 | |||
|ontology_enrichment_uberon=UBERON:0003210!8.38e-10!3;UBERON:0004821!1.18e-09!3;UBERON:0003215!1.18e-09!3;UBERON:0002299!1.18e-09!3;UBERON:0006524!1.18e-09!3;UBERON:0008874!1.18e-09!3;UBERON:0002169!1.18e-09!3;UBERON:0004894!1.18e-09!3;UBERON:0002506!7.26e-08!1;UBERON:0001769!7.26e-08!1;UBERON:0000487!6.69e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0004903;3.61e-34;2!UBERON:0002173;3.61e-34;2!UBERON:0002186;3.61e-34;2!UBERON:0004821;2.62e-23;3!UBERON:0007499;2.62e-23;3!UBERON:0003215;2.62e-23;3!UBERON:0010368;2.62e-23;3!UBERON:0009911;2.62e-23;3!UBERON:0002299;2.62e-23;3!UBERON:0006524;2.62e-23;3!UBERON:0008874;2.62e-23;3!UBERON:0002169;2.62e-23;3!UBERON:0004894;2.62e-23;3!UBERON:0009856;7.35e-18;4!UBERON:0004802;4.91e-15;19!UBERON:0000115;4.91e-15;19!UBERON:0002046;1.83e-14;5!UBERON:0002048;3.77e-13;22!UBERON:0004807;3.77e-13;22!UBERON:0000117;3.77e-13;22!UBERON:0000171;3.77e-13;22!UBERON:0000170;3.77e-13;22!UBERON:0005911;5.41e-08;36!UBERON:0005178;5.43e-08;34!UBERON:0002224;5.43e-08;34!UBERON:0000058;5.73e-08;10!UBERON:0005181;2.44e-07;35 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004903,3.61e-34,2;UBERON:0002173,3.61e-34,2;UBERON:0002186,3.61e-34,2;UBERON:0004821,2.62e-23,3;UBERON:0003215,2.62e-23,3;UBERON:0010368,2.62e-23,3;UBERON:0009911,2.62e-23,3;UBERON:0002299,2.62e-23,3;UBERON:0006524,2.62e-23,3;UBERON:0008874,2.62e-23,3;UBERON:0002169,2.62e-23,3;UBERON:0004894,2.62e-23,3;UBERON:0004802,4.91e-15,19;UBERON:0000115,4.91e-15,19;UBERON:0002046,1.83e-14,5;UBERON:0004117,1.83e-14,5;UBERON:0007689,1.83e-14,5;UBERON:0007123,1.83e-14,5;UBERON:0003091,1.83e-14,5;UBERON:0002048,3.77e-13,22;UBERON:0000117,3.77e-13,22;UBERON:0000171,3.77e-13,22;UBERON:0000170,3.77e-13,22;UBERON:0005597,3.77e-13,22;UBERON:0000118,3.77e-13,22;UBERON:0004807,1.40e-10,28;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0005181,1.09e-08,35;UBERON:0005911,2.70e-08,82;UBERON:0005153,2.82e-08,37;UBERON:0008947,4.36e-08,38;UBERON:0003258,4.36e-08,38;UBERON:0009722,2.63e-07,11;UBERON:0007690,2.63e-07,11;UBERON:0000072,9.72e-07,47;UBERON:0005157,9.72e-07,47 | |||
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|short_description=p@chr13:70823810..70823813,+ | |short_description=p@chr13:70823810..70823813,+ | ||
}} | }} |
Latest revision as of 16:58, 24 July 2015
Short description: | p@chr13:70823810..70823813, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:70823810..70823813, + |
Coexpression cluster: | C330_bronchioalveolar_oral_signet_embryonic_lymphangiectasia_testis_adult |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pneumocyte | 2.62e-23 | 3 |
epithelial cell of lung | 4.91e-15 | 19 |
epithelial cell of tracheobronchial tree | 1.04e-08 | 9 |
epithelial cell of lower respiratory tract | 1.04e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
non-small cell lung carcinoma | 2.19e-53 | 5 |
lung adenocarcinoma | 3.61e-34 | 2 |
lung carcinoma | 2.66e-30 | 9 |
lung large cell carcinoma | 3.27e-23 | 3 |
lung cancer | 1.04e-18 | 15 |
respiratory system cancer | 1.27e-17 | 16 |
bronchus cancer | 8.16e-11 | 7 |
bronchogenic carcinoma | 8.16e-11 | 7 |