FFCP PHASE1:Hg19::chr10:118031671..118031683,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2674 | |EntrezGene=2674 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4243 | |HGNC=4243 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=110bp_to_ENST00000369236_5end | |association_with_transcript=110bp_to_ENST00000369236_5end | ||
|cluster_id=chr10:118031671..118031683,- | |||
|coexpression_cluster_id=C1565 | |||
|description=CAGE_peak_9_at_GFRA1_5end | |description=CAGE_peak_9_at_GFRA1_5end | ||
|id=chr10:118031671..118031683,- | |id=chr10:118031671..118031683,- | ||
|ontology_enrichment_celltype=CL:0002620!8.54e-07!23 | |ontology_enrichment_celltype=CL:0002620!8.54e-07!23 | ||
|ontology_enrichment_celltype_v019=CL:0002567;1.24e-12;3!CL:0000710;1.39e-08;20!CL:0000153;3.13e-07;9!CL:0000447;3.13e-07;9!CL:0002620;4.18e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,6.03e-13,3;CL:0000710,1.01e-08,20;CL:0000153,3.04e-07,9;CL:0000447,3.04e-07,9;CL:0002620,4.22e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:5093;3.38e-10;4!DOID:1612;3.38e-10;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5093,3.45e-10,4;DOID:1612,3.45e-10,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!6.95e-09!115;UBERON:0000475!1.77e-07!365 | |ontology_enrichment_uberon=UBERON:0007023!6.95e-09!115;UBERON:0000475!1.77e-07!365 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p9@GFRA1 | |short_description=p9@GFRA1 | ||
}} | }} |
Latest revision as of 13:46, 16 September 2015
Short description: | p9@GFRA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_GFRA1_5end |
Coexpression cluster: | C1565_MCF7_normal_mesothelioma_Smooth_breast_thyroid_bone |
Association with transcript: | 110bp_to_ENST00000369236_5end |
EntrezGene: | GFRA1 |
HGNC: | 4243 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 6.03e-13 | 3 |
neurecto-epithelial cell | 1.01e-08 | 20 |
GAG secreting cell | 3.04e-07 | 9 |
carbohydrate secreting cell | 3.04e-07 | 9 |
skin fibroblast | 4.22e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
thoracic cancer | 3.45e-10 | 4 |
breast cancer | 3.45e-10 | 4 |