FFCP PHASE1:Hg19::chr13:46756271..46756348,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3936 | |EntrezGene=3936 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6528 | |HGNC=6528 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000460190_5end | |association_with_transcript=0bp_to_ENST00000460190_5end | ||
|cluster_id=chr13:46756271..46756348,- | |||
|coexpression_cluster_id=C246 | |||
|description=CAGE_peak_1_at_LCP1_5end | |description=CAGE_peak_1_at_LCP1_5end | ||
|id=chr13:46756271..46756348,- | |id=chr13:46756271..46756348,- | ||
|ontology_enrichment_celltype=CL:0000037!1.24e-76!172;CL:0000566!1.24e-76!172;CL:0002032!1.46e-72!165;CL:0000837!1.46e-72!165;CL:0000988!3.85e-71!182;CL:0000738!4.66e-67!140;CL:0002031!8.47e-55!124;CL:0002087!5.92e-53!119;CL:0000763!4.83e-46!112;CL:0000049!4.83e-46!112;CL:0000766!3.09e-35!76;CL:0000557!3.59e-31!71;CL:0000839!7.72e-30!70;CL:0002009!5.81e-29!65;CL:0002194!1.15e-27!63;CL:0000576!1.15e-27!63;CL:0000040!1.15e-27!63;CL:0000559!1.15e-27!63;CL:0002057!1.18e-25!42;CL:0000860!2.52e-22!45;CL:0000542!3.40e-22!53;CL:0000051!3.40e-22!53;CL:0000838!8.75e-22!52;CL:0000945!5.32e-11!24;CL:0000826!5.32e-11!24;CL:0000084!8.88e-11!25;CL:0000827!8.88e-11!25;CL:0000134!1.47e-08!358;CL:0000791!4.74e-08!18;CL:0000789!4.74e-08!18;CL:0002420!4.74e-08!18;CL:0002419!4.74e-08!18;CL:0000790!4.74e-08!18;CL:0000451!5.97e-08!10;CL:0002320!3.24e-07!365;CL:0000990!3.89e-07!8;CL:0000094!6.88e-07!8 | |ontology_enrichment_celltype=CL:0000037!1.24e-76!172;CL:0000566!1.24e-76!172;CL:0002032!1.46e-72!165;CL:0000837!1.46e-72!165;CL:0000988!3.85e-71!182;CL:0000738!4.66e-67!140;CL:0002031!8.47e-55!124;CL:0002087!5.92e-53!119;CL:0000763!4.83e-46!112;CL:0000049!4.83e-46!112;CL:0000766!3.09e-35!76;CL:0000557!3.59e-31!71;CL:0000839!7.72e-30!70;CL:0002009!5.81e-29!65;CL:0002194!1.15e-27!63;CL:0000576!1.15e-27!63;CL:0000040!1.15e-27!63;CL:0000559!1.15e-27!63;CL:0002057!1.18e-25!42;CL:0000860!2.52e-22!45;CL:0000542!3.40e-22!53;CL:0000051!3.40e-22!53;CL:0000838!8.75e-22!52;CL:0000945!5.32e-11!24;CL:0000826!5.32e-11!24;CL:0000084!8.88e-11!25;CL:0000827!8.88e-11!25;CL:0000134!1.47e-08!358;CL:0000791!4.74e-08!18;CL:0000789!4.74e-08!18;CL:0002420!4.74e-08!18;CL:0002419!4.74e-08!18;CL:0000790!4.74e-08!18;CL:0000451!5.97e-08!10;CL:0002320!3.24e-07!365;CL:0000990!3.89e-07!8;CL:0000094!6.88e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.50e-20;33!CL:0002057;7.50e-20;33!CL:0000473;4.13e-19;39!CL:0000234;4.13e-19;39!CL:0000576;1.04e-18;48!CL:0000766;3.52e-17;69!CL:0002087;2.48e-16;104!CL:0000738;6.42e-16;136!CL:0000763;3.12e-14;100!CL:0000988;8.47e-14;177!CL:0000542;1.55e-13;53!CL:0000945;1.19e-11;24!CL:0000084;2.06e-11;25!CL:0000791;1.69e-08;18!CL:0000789;1.69e-08;18!CL:0002419;1.69e-08;18!CL:0000451;2.15e-08;10!CL:0000990;1.59e-07;8!CL:0000094;2.94e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.36e-85,168;CL:0002032,3.22e-81,161;CL:0000837,3.22e-81,161;CL:0000988,3.51e-81,177;CL:0000738,6.96e-76,136;CL:0002031,1.48e-62,120;CL:0002087,1.31e-60,115;CL:0000763,9.50e-53,108;CL:0000049,9.50e-53,108;CL:0000766,7.44e-42,72;CL:0000557,2.39e-37,67;CL:0000839,7.79e-36,66;CL:0002009,4.83e-35,61;CL:0002194,1.29e-33,59;CL:0000576,1.29e-33,59;CL:0000040,1.29e-33,59;CL:0000559,1.29e-33,59;CL:0000473,3.11e-30,48;CL:0000234,3.11e-30,48;CL:0000860,2.56e-27,42;CL:0002057,2.56e-27,42;CL:0000542,1.29e-23,53;CL:0000051,1.29e-23,53;CL:0000838,3.53e-23,52;CL:0000945,1.19e-11,24;CL:0000826,1.19e-11,24;CL:0000084,2.06e-11,25;CL:0000827,2.06e-11,25;CL:0000134,6.06e-10,354;CL:0002320,1.20e-08,361;CL:0000791,1.69e-08,18;CL:0000789,1.69e-08,18;CL:0002420,1.69e-08,18;CL:0002419,1.69e-08,18;CL:0000790,1.69e-08,18;CL:0000451,2.16e-08,10;CL:0000990,1.60e-07,8;CL:0000094,2.94e-07,8;CL:0002393,6.09e-07,9;CL:0002397,6.09e-07,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.07e-19;42!CL:0000049;4.50e-14;108!CL:0000051;1.55e-13;53!CL:0000790;1.69e-08;18 | |||
|ontology_enrichment_disease=DOID:2531!2.46e-15!51;DOID:0060083!2.46e-15!51;DOID:1240!1.74e-11!39;DOID:8692!1.81e-08!31 | |||
|ontology_enrichment_disease_v019=DOID:2531;9.28e-10;51!DOID:0060083;9.28e-10;51!DOID:1240;1.74e-09;39!DOID:8692;1.74e-08;31 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,8.42e-16,51;DOID:0060083,8.42e-16,51;DOID:1240,5.52e-12,39;DOID:8692,8.95e-09,31 | |||
|ontology_enrichment_uberon=UBERON:0002390!5.99e-36!102;UBERON:0003061!5.99e-36!102;UBERON:0002193!5.16e-31!112;UBERON:0002371!6.54e-25!80;UBERON:0001474!4.71e-21!86;UBERON:0002405!4.48e-18!115;UBERON:0004765!3.42e-14!101;UBERON:0001434!3.42e-14!101;UBERON:0007023!7.25e-11!115;UBERON:0000178!5.95e-09!15;UBERON:0000179!5.95e-09!15;UBERON:0000463!5.95e-09!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.85e-09;15!UBERON:0000179;1.85e-09;15!UBERON:0000463;1.85e-09;15 | |||
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| ||
|short_description=p1@LCP1 | |short_description=p1@LCP1 | ||
}} | }} |
Latest revision as of 13:42, 17 September 2015
Short description: | p1@LCP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_LCP1_5end |
Coexpression cluster: | C246_Neutrophils_Eosinophils_Whole_CD14_CD14CD16_Basophils_migratory |
Association with transcript: | 0bp_to_ENST00000460190_5end |
EntrezGene: | LCP1 |
HGNC: | 6528 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 4.95e-43 | 98 |
blood island | 4.95e-43 | 98 |
hemolymphoid system | 1.82e-36 | 108 |
bone marrow | 7.16e-31 | 76 |
immune system | 4.48e-28 | 93 |
bone element | 1.03e-25 | 82 |
skeletal element | 8.17e-21 | 90 |
skeletal system | 3.58e-16 | 100 |
adult organism | 1.75e-11 | 114 |
blood | 1.84e-09 | 15 |
haemolymphatic fluid | 1.84e-09 | 15 |
organism substance | 1.84e-09 | 15 |
connective tissue | 9.30e-08 | 371 |
lateral plate mesoderm | 1.39e-07 | 203 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 8.42e-16 | 51 |
immune system cancer | 8.42e-16 | 51 |
leukemia | 5.52e-12 | 39 |
myeloid leukemia | 8.95e-09 | 31 |