FFCP PHASE1:Mm9::chr4:47004408..47004522,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=242425 | |EntrezGene=242425 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80T41 | |UniProt=Q80T41 | ||
|association_with_transcript=63bp_to_NM_001081141,uc008sug.1_5end | |association_with_transcript=63bp_to_NM_001081141,uc008sug.1_5end | ||
|cluster_id=chr4:47004408..47004522,- | |||
|description=CAGE_peak_1_at_Gabbr2_5end | |description=CAGE_peak_1_at_Gabbr2_5end | ||
|id=chr4:47004408..47004522,- | |id=chr4:47004408..47004522,- | ||
|ontology_enrichment_celltype=CL:0000117!4.46e-14!23;CL:0000337!4.46e-14!23;CL:0000540!3.68e-09!33;CL:0000047!3.68e-09!33;CL:0000031!3.68e-09!33;CL:0000404!3.68e-09!33;CL:0000221!4.73e-08!44;CL:0000133!4.73e-08!44;CL:0002319!7.21e-08!43 | |ontology_enrichment_celltype=CL:0000117!4.46e-14!23;CL:0000337!4.46e-14!23;CL:0000540!3.68e-09!33;CL:0000047!3.68e-09!33;CL:0000031!3.68e-09!33;CL:0000404!3.68e-09!33;CL:0000221!4.73e-08!44;CL:0000133!4.73e-08!44;CL:0002319!7.21e-08!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.76e-17,23;CL:0000337,1.76e-17,23;CL:0000540,1.11e-09,33;CL:0000047,1.11e-09,33;CL:0000031,1.11e-09,33;CL:0000404,1.11e-09,33;CL:0000221,4.56e-07,44;CL:0000133,4.56e-07,44;CL:0000393,4.65e-07,39;CL:0000211,4.65e-07,39;CL:0002319,7.49e-07,43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.87e-24!75;UBERON:0001016!5.87e-24!75;UBERON:0000033!6.56e-24!63;UBERON:0001017!1.26e-23!73;UBERON:0005743!1.26e-23!73;UBERON:0001049!1.02e-22!52;UBERON:0005068!1.02e-22!52;UBERON:0006241!1.02e-22!52;UBERON:0007135!1.02e-22!52;UBERON:0000955!1.43e-21!50;UBERON:0006238!1.43e-21!50;UBERON:0002616!6.31e-21!49;UBERON:0004121!5.77e-20!102;UBERON:0000924!5.77e-20!102;UBERON:0006601!5.77e-20!102;UBERON:0002020!1.72e-19!34;UBERON:0003056!2.19e-19!49;UBERON:0002346!5.96e-19!71;UBERON:0003075!5.96e-19!71;UBERON:0007284!5.96e-19!71;UBERON:0003080!1.24e-17!40;UBERON:0002780!6.36e-17!39;UBERON:0001890!6.36e-17!39;UBERON:0006240!6.36e-17!39;UBERON:0002791!3.80e-16!29;UBERON:0003528!3.80e-16!29;UBERON:0001893!3.80e-16!29;UBERON:0007811!9.05e-13!86;UBERON:0000956!3.29e-11!21;UBERON:0001869!3.29e-11!21;UBERON:0000203!3.29e-11!21;UBERON:0000153!4.69e-11!94;UBERON:0002619!1.28e-09!17;UBERON:0002021!2.13e-09!10;UBERON:0000411!2.13e-09!10;UBERON:0001950!2.13e-09!10;UBERON:0000025!1.34e-08!114;UBERON:0004111!4.00e-08!122 | |ontology_enrichment_uberon=UBERON:0000073!5.87e-24!75;UBERON:0001016!5.87e-24!75;UBERON:0000033!6.56e-24!63;UBERON:0001017!1.26e-23!73;UBERON:0005743!1.26e-23!73;UBERON:0001049!1.02e-22!52;UBERON:0005068!1.02e-22!52;UBERON:0006241!1.02e-22!52;UBERON:0007135!1.02e-22!52;UBERON:0000955!1.43e-21!50;UBERON:0006238!1.43e-21!50;UBERON:0002616!6.31e-21!49;UBERON:0004121!5.77e-20!102;UBERON:0000924!5.77e-20!102;UBERON:0006601!5.77e-20!102;UBERON:0002020!1.72e-19!34;UBERON:0003056!2.19e-19!49;UBERON:0002346!5.96e-19!71;UBERON:0003075!5.96e-19!71;UBERON:0007284!5.96e-19!71;UBERON:0003080!1.24e-17!40;UBERON:0002780!6.36e-17!39;UBERON:0001890!6.36e-17!39;UBERON:0006240!6.36e-17!39;UBERON:0002791!3.80e-16!29;UBERON:0003528!3.80e-16!29;UBERON:0001893!3.80e-16!29;UBERON:0007811!9.05e-13!86;UBERON:0000956!3.29e-11!21;UBERON:0001869!3.29e-11!21;UBERON:0000203!3.29e-11!21;UBERON:0000153!4.69e-11!94;UBERON:0002619!1.28e-09!17;UBERON:0002021!2.13e-09!10;UBERON:0000411!2.13e-09!10;UBERON:0001950!2.13e-09!10;UBERON:0000025!1.34e-08!114;UBERON:0004111!4.00e-08!122 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.58e-28,54;UBERON:0001049,3.17e-26,52;UBERON:0005068,3.17e-26,52;UBERON:0006241,3.17e-26,52;UBERON:0007135,3.17e-26,52;UBERON:0002346,7.14e-26,64;UBERON:0003075,7.14e-26,64;UBERON:0007284,7.14e-26,64;UBERON:0002020,6.75e-25,34;UBERON:0001017,2.33e-24,73;UBERON:0001016,3.45e-23,75;UBERON:0000955,5.80e-22,47;UBERON:0006238,5.80e-22,47;UBERON:0010371,3.13e-21,73;UBERON:0002616,3.50e-21,46;UBERON:0003056,4.76e-21,49;UBERON:0004121,6.49e-21,95;UBERON:0000924,6.49e-21,95;UBERON:0006601,6.49e-21,95;UBERON:0003528,1.27e-20,29;UBERON:0002791,1.27e-20,29;UBERON:0001893,1.27e-20,29;UBERON:0003080,2.22e-19,40;UBERON:0002780,1.65e-18,39;UBERON:0001890,1.65e-18,39;UBERON:0006240,1.65e-18,39;UBERON:0000956,2.60e-14,21;UBERON:0001869,2.60e-14,21;UBERON:0000203,2.60e-14,21;UBERON:0010314,3.33e-13,92;UBERON:0002619,2.68e-12,17;UBERON:0002021,1.57e-11,10;UBERON:0000411,1.57e-11,10;UBERON:0001950,1.57e-11,10;UBERON:0000025,1.90e-11,114;UBERON:0004111,5.27e-10,122;UBERON:0002420,1.63e-07,8;UBERON:0007245,1.63e-07,8;UBERON:0010009,1.63e-07,8;UBERON:0010011,1.63e-07,8;UBERON:0000454,1.63e-07,8;UBERON:0003076,2.30e-07,12;UBERON:0003057,2.30e-07,12 | |||
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.52484849691981,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,11.5320382689971,12.6957835025288,12.0427966666174,0,0,0,0,0,0.898800331555214,1.92109152660777,3.21437798156281,3.24014251996058,1.05162480675691,31.4216082844184,28.4920417827581,5.38959516545798,3.35459148563827,5.51531271966013,56.1590993096882,80.4430229936683,60.2137610364474,8.83638127792299,10.3381037270723,11.4600941522487,31.547678887156,37.7050948721226,41.5611233952923,33.2930301585245,27.0506193518296,14.1663578827228,0.454357159999104,0.906858721281426,0,3.44169550792555,12.9194553404473,9.17495425784289,7.14754059192436,3.13618820968135,1.96622188184453,0,0,0,1.26759077799012,0,0,0,0,0,0,2.2836775943812,0.258937883647172,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,44.5026811457552,54.4561437714983,0,0,0,0,49.4309110035915,31.1100409916666,19.2251158732683,88.9980519384456,103.053329304123,65.4532340362614,50.2947915510049,0.101839363850316,0.248813941220186,0.252722758433675,2.10441855886474,0,0.459804208866946,1.26043490863744,1.80845781402858,4.49040894398764,3.07472928683639,4.02917415606834,4.65666067330228,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.7693041577512,21.4041593748912,0.330418782983798,0,0,0,0,0,0.22237804384487,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.48648406678877,0,0,0,0,0,0,0.287696137450811,0.162135226775035,3.0201755450689,10.0637744569148,10.0478055870496,9.36113019343682,3.03094653536534,2.87035861635059,3.85954817090694,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4036896781444,25.0833009307315,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0.395287777946524,16.708708453934,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.754420319023592,0.590603785761546,0.614870295887855,0.775284879504663,0.363533729477506,0.712994756769443,0.632073515871632,0,2.06271086496374,1.70219802876894,0.18006109403131,0,0.428674070063185,0.177340233642274,1.78368817602071,0.658196082408484,1.8267896946876,0,0,0,0,0,0,0.119372344003136,0.328281799490123,0.582961673259701,24.2907145633768,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0.269728692769641,0.909188012978695,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0.179427713218951,0,0,0,0,0,0,97.1373169301354,101.731877268086,81.9240584218337,108.611211241211,87.6905625306422,79.3163592259185,92.4780825317574,86.4616710190503,94.7067634776988,88.5370133095612,0,0.399024873401031,0,1.94485373654635,0.838452650511929,3.12533964365024,1.33348036680969,4.12070114477788,3.20919209591815,3.53776096469316,2.02783439912192,2.07488975524684,2.06011316433741,3.13723246783859,2.52716063404698,4.28664322154766,3.47652977834566,4.24400285020151,4.12085900803307,2.20798380201596,2.74295401908332,2.30718548007139,2.38436189947321,2.61623549938191,2.63506265162926,2.28459441307527,2.37806364734604,1.8414879800649,3.93831930152999,1.68342681497322,2.84724043498018,2.85662998889134,2.04615521584845,2.47898945897546,2.3148793317737,4.24677982494508,2.57324769289949,4.08255002691767,1.91288332068843,2.42650561031467,1.15933917810211 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|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.52484849691981,0,0,0.159992422793407,0,0,0,0,0.380046838912748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,1.43752564364972,0,0,0,0,0,0,11.5320382689971,12.6957835025288,12.0427966666174,0,0,0,0,0,0.898800331555214,1.92109152660777,3.21437798156281,3.24014251996058,1.05162480675691,31.4216082844184,28.4920417827581,5.38959516545798,3.35459148563827,5.51531271966013,56.1590993096882,80.4430229936683,60.2137610364474,8.83638127792299,10.3381037270723,11.4600941522487,31.547678887156,37.7050948721226,41.5611233952923,33.2930301585245,27.0506193518296,14.1663578827228,0.454357159999104,0.906858721281426,0,3.44169550792555,12.9194553404473,9.17495425784289,7.14754059192436,3.13618820968135,1.96622188184453,0,0,0,1.26759077799012,0,0,0,0,0,0,2.2836775943812,0.258937883647172,0,0,0,0,0,0.23517741427141,0,0,0,0,0,0,0,0,44.5026811457552,54.4561437714983,0,0,0,0,49.4309110035915,31.1100409916666,19.2251158732683,88.9980519384456,103.053329304123,65.4532340362614,50.2947915510049,0.101839363850316,0.248813941220186,0.252722758433675,2.10441855886474,0,0.459804208866946,1.26043490863744,1.80845781402858,4.49040894398764,3.07472928683639,4.02917415606834,4.65666067330228,0,0.189106080167819,0.175951124163949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,64.7693041577512,21.4041593748912,0.330418782983798,0,0,0,0,0,0.22237804384487,0,0,0,0,0.397912944082302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.48648406678877,0,0,0,0,0,0,0.287696137450811,0.162135226775035,3.0201755450689,10.0637744569148,10.0478055870496,9.36113019343682,3.03094653536534,2.87035861635059,3.85954817090694,0,0,0.162964976442026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.4036896781444,25.0833009307315,0,0,0,0,0.215423397732799,0,0,0.283076530788832,0,0,0.395287777946524,16.708708453934,0.141940085208269,0.178065603667255,0,0.164970122972535,0,0.242780636154981,0,0.754420319023592,0.590603785761546,0.614870295887855,0.775284879504663,0.363533729477506,0.712994756769443,0.632073515871632,0,2.06271086496374,1.70219802876894,0.18006109403131,0,0.428674070063185,0.177340233642274,1.78368817602071,0.658196082408484,1.8267896946876,0,0,0,0,0,0,0.119372344003136,0.328281799490123,0.582961673259701,24.2907145633768,0,0.206386867963223,0,0,0,0,0,0,0,0,0.158167996790568,0,0,0.209088296014469,0,0.269728692769641,0.909188012978695,0,0,0.621339313086926,0,0,0,0,0,0,0.117357238645754,0.13020438484395,0,0.241584120826006,0,0,0.202725215290164,0,0,0,0,0,0,0.100966449948148,0.0762068066549998,0.100826185136841,0,0,0,0.226730383615211,0,0.179427713218951,0,0,0,0,0,0,97.1373169301354,101.731877268086,81.9240584218337,108.611211241211,87.6905625306422,79.3163592259185,92.4780825317574,86.4616710190503,94.7067634776988,88.5370133095612,0,0.399024873401031,0,1.94485373654635,0.838452650511929,3.12533964365024,1.33348036680969,4.12070114477788,3.20919209591815,3.53776096469316,2.02783439912192,2.07488975524684,2.06011316433741,3.13723246783859,2.52716063404698,4.28664322154766,3.47652977834566,4.24400285020151,4.12085900803307,2.20798380201596,2.74295401908332,2.30718548007139,2.38436189947321,2.61623549938191,2.63506265162926,2.28459441307527,2.37806364734604,1.8414879800649,3.93831930152999,1.68342681497322,2.84724043498018,2.85662998889134,2.04615521584845,2.47898945897546,2.3148793317737,4.24677982494508,2.57324769289949,4.08255002691767,1.91288332068843,2.42650561031467,1.15933917810211 | ||
|short_description=p1@Gabbr2 | |short_description=p1@Gabbr2 | ||
}} | }} |
Latest revision as of 01:29, 27 September 2015
Short description: | p1@Gabbr2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Gabbr2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 63bp_to_NM_001081141, uc008sug.1_5end |
EntrezGene: | Gabbr2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.76e-17 | 23 |
neuroblast (sensu Vertebrata) | 1.76e-17 | 23 |
neuron | 1.11e-09 | 33 |
neuronal stem cell | 1.11e-09 | 33 |
neuroblast | 1.11e-09 | 33 |
electrically signaling cell | 1.11e-09 | 33 |
ectodermal cell | 4.56e-07 | 44 |
neurectodermal cell | 4.56e-07 | 44 |
electrically responsive cell | 4.65e-07 | 39 |
electrically active cell | 4.65e-07 | 39 |
neural cell | 7.49e-07 | 43 |