FFCP PHASE1:Hg19::chr13:38144751..38144809,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10631 | |EntrezGene=10631 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16953 | |HGNC=16953 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=138bp_to_ENST00000473823_5end | |association_with_transcript=138bp_to_ENST00000473823_5end | ||
|cluster_id=chr13:38144751..38144809,- | |||
|coexpression_cluster_id=C349 | |||
|description=CAGE_peak_4_at_POSTN_5end | |description=CAGE_peak_4_at_POSTN_5end | ||
|id=chr13:38144751..38144809,- | |id=chr13:38144751..38144809,- | ||
|ontology_enrichment_celltype=CL:0000055!4.03e-14!180;CL:0000057!7.84e-12!75;CL:0002334!5.12e-11!12;CL:0000680!1.92e-09!57;CL:0000056!1.92e-09!57;CL:0000355!1.92e-09!57;CL:0002494!3.64e-08!16;CL:0000187!7.17e-08!54;CL:0002570!4.71e-07!8;CL:0002548!9.11e-07!6 | |ontology_enrichment_celltype=CL:0000055!4.03e-14!180;CL:0000057!7.84e-12!75;CL:0002334!5.12e-11!12;CL:0000680!1.92e-09!57;CL:0000056!1.92e-09!57;CL:0000355!1.92e-09!57;CL:0002494!3.64e-08!16;CL:0000187!7.17e-08!54;CL:0002570!4.71e-07!8;CL:0002548!9.11e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:1000306;3.93e-11;4!CL:0002547;3.93e-11;4!CL:0002334;1.04e-10;12!CL:0002580;3.82e-09;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000306,5.68e-11,4;CL:0002547,5.68e-11,4;CL:0002334,7.70e-11,12;CL:0000057,2.10e-09,76;CL:0002580,2.23e-09,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!2.04e-10!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001134!7.63e-11!61;UBERON:0002036!7.63e-11!61;UBERON:0003082!7.63e-11!61;UBERON:0002385!3.35e-10!63;UBERON:0001015!3.35e-10!63;UBERON:0000383!3.35e-10!63;UBERON:0000948!5.67e-10!24;UBERON:0005498!5.67e-10!24;UBERON:0004140!5.67e-10!24;UBERON:0009881!5.67e-10!24;UBERON:0004141!5.67e-10!24;UBERON:0003084!5.67e-10!24;UBERON:0007005!5.67e-10!24;UBERON:0004139!5.67e-10!24;UBERON:0004291!5.67e-10!24;UBERON:0004872!1.47e-09!84;UBERON:0004290!5.16e-09!70;UBERON:0007100!2.54e-08!27;UBERON:0001637!2.64e-08!42;UBERON:0003509!2.64e-08!42;UBERON:0004572!2.64e-08!42;UBERON:0000914!1.33e-07!83;UBERON:0002329!1.33e-07!83;UBERON:0003077!1.33e-07!83;UBERON:0003059!1.33e-07!83;UBERON:0007282!1.33e-07!83;UBERON:0009618!1.33e-07!83;UBERON:0007285!1.33e-07!83;UBERON:0000486!6.19e-07!82;UBERON:0004535!7.36e-07!110 | |||
|ontology_enrichment_uberon_v019=UBERON:0004797;3.93e-11;4!UBERON:0000415;3.93e-11;4!UBERON:0007240;3.93e-11;4!UBERON:0005742;3.93e-11;4!UBERON:0005734;3.93e-11;4!UBERON:0004664;3.93e-11;4!UBERON:0004663;3.93e-11;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000415,5.68e-11,4;UBERON:0007240,5.68e-11,4;UBERON:0005742,5.68e-11,4;UBERON:0005734,5.68e-11,4;UBERON:0004664,5.68e-11,4;UBERON:0004663,5.68e-11,4;UBERON:0004797,2.63e-09,7 | |||
|phase1_expression=0,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,3.35350429851818,0.383587685530591,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.933382937297,1.01304409331664,1.85372853138506,2.0078563452417,3.19201543978521,0.560677600142307,1.06748995729705,2.4666754841716,0.311211035399766,0.538842688278752,1.14423332179421,0,2.30470369792,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22595118319608,0,4.08355859376076,0.358779271377724,0.427114777637135,0.423863802319124,0.900273288253207,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.828449087780694,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93907573636667,0,1.690605505112,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,3.31583314765545,2.61460037580088,31.1915732488018,0,0,0,2.15662369942424,1.14861935834114,0,1.44781306667579,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57535895367776,4.10386674233472,1.73472656537328,0.234282829985426,0,0,1.03473071292505,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,0,0,0,3.96972492510043,1.99500565274481,4.49056151092918,1.53766979106841,0.511707249066704,8.36440389946759,0,0.308419387605311,3.37367278094941,0.657017248110473,2.07701771673448,0.232420756919918,0,0,0,0.68888668898764,1.0925470080403,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0.322260734604821,1.0151168573996,0.426133137080504,1.95870478422822,0.826424576804891,0.576570202095319,0,0,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0.37064843820784,1.43124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,1.37268514868027,0.471249609382746,0,1.58510321173008,0,0,0.974853958525138,0,0,9.33275850894504,0,1.10273068709225,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,3.73247505194169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,1.43574604915363,0,0,0,0.335917362433631,1.80149941771202,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,1.10961172300523,0,0,0,0.457680136793847,0,0.15543720058278,0,0,0.899606224327209,0.931577741257556,0.414706207840855,2.92425886013794,5.73919567992907,1.6528336989694,13.3281824259078,0.813741466409323,0.181848659202559,0.751873899297419,0.464033759878494,2.3885753321917,0.400027764663154,3.77735275701072,5.38799182025471,0,0.192619830407303,0,0,6.80117776536817,0,1.71315693154527,0.179088841081487,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,2.82140754952547,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,0,0,0,2.12903492763126,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,6.50951982061501,0,0,0.828864656652147,0.51215543128185,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,5.82853191670967,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,6.45723035813704,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,1.5870805215462,10.0438654905023,0.462175628631418,6.48939843185684,0,0,0,0,0,0,0,0,0,0,0,0,4.76128862927481,0,0.0620747142958579,0,0,0.808468755832877,0,2.05339980651169,0,0,1.99596213927608,0,0,0,0,2.34640942403454,0,1.22068853494722,0,0,0 | |phase1_expression=0,0.428201047781966,0.563817616383885,0,0.446961094427288,0,0,0,0,0,0,0,0,0,0,0,0,1.46062018077475,0.487932798790507,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0.309632246632152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.473447805734733,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.75227465255847,3.35350429851818,0.383587685530591,0,0,0,0,0.486634870302636,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,0.275118041940067,0.208994966536811,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.933382937297,1.01304409331664,1.85372853138506,2.0078563452417,3.19201543978521,0.560677600142307,1.06748995729705,2.4666754841716,0.311211035399766,0.538842688278752,1.14423332179421,0,2.30470369792,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22595118319608,0,4.08355859376076,0.358779271377724,0.427114777637135,0.423863802319124,0.900273288253207,0.103052529238439,0.257640540045629,0,0.168776332241266,0,0.252433774244115,0.828449087780694,0,0.355009592516614,0,0,0.193260853163297,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.590789906681404,0,0,0.171567810298526,0.219500570817251,0,0,0,0,0,0,0,0.234817388471643,0,0,0.190254152234598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.93907573636667,0,1.690605505112,0.797814349754612,1.04007436911366,0,0,0,0.142977993658148,0,0,0.65147236858747,0,0,3.31583314765545,2.61460037580088,31.1915732488018,0,0,0,2.15662369942424,1.14861935834114,0,1.44781306667579,0.205476322550383,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.57535895367776,4.10386674233472,1.73472656537328,0.234282829985426,0,0,1.03473071292505,0,0.737476674166813,0.0868836144680828,0,0,0,0,0,0,0,0,3.96972492510043,1.99500565274481,4.49056151092918,1.53766979106841,0.511707249066704,8.36440389946759,0,0.308419387605311,3.37367278094941,0.657017248110473,2.07701771673448,0.232420756919918,0,0,0,0.68888668898764,1.0925470080403,0.655622074797121,0,0,0,0,0.105551628892876,0,0,0.215915916102139,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0.386682873168488,0,0.15350367472613,0,0.322260734604821,1.0151168573996,0.426133137080504,1.95870478422822,0.826424576804891,0.576570202095319,0,0,0.464845549297286,0.94443704049192,0,0.308033580176089,0,0,0.37064843820784,1.43124886741991,0,0,0,0,0,0,0.78494864019923,0.179872457583315,1.37268514868027,0.471249609382746,0,1.58510321173008,0,0,0.974853958525138,0,0,9.33275850894504,0,1.10273068709225,0.66343897524122,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0,0,0,0,0,0,0.19924798825107,0,0,0,0,3.73247505194169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0,0.611030144933625,0,0,0,0,3.21031058919516,0,0,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0.138674673013139,0,0,0,0,0,0,0,0,0,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271808412147228,0,0,0,0,0,0,0,0,0.837847203816763,0.229160424011684,1.43574604915363,0,0,0,0.335917362433631,1.80149941771202,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0.170388021785422,0,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.298509605773748,0.934853239388898,1.10961172300523,0,0,0,0.457680136793847,0,0.15543720058278,0,0,0.899606224327209,0.931577741257556,0.414706207840855,2.92425886013794,5.73919567992907,1.6528336989694,13.3281824259078,0.813741466409323,0.181848659202559,0.751873899297419,0.464033759878494,2.3885753321917,0.400027764663154,3.77735275701072,5.38799182025471,0,0.192619830407303,0,0,6.80117776536817,0,1.71315693154527,0.179088841081487,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0.655219697692825,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.54403480522735,0,0,2.82140754952547,0,0,0,0.159633859057151,0,0,0,0,0,0,0,0,0,1.52552838186867,0,0,0,0,0,0,2.12903492763126,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0,0.342976018874837,0,0,0,0,0,0,0,1.82631744101899,0,0,0,0,6.50951982061501,0,0,0.828864656652147,0.51215543128185,1.38251932362818,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0.102662806856247,1.1598144313382,5.82853191670967,0,0,0,0,0,0,0,0.437119121007915,0,0,0,0,0,0,6.45723035813704,0,0,0,0,0,0,0.730336388246517,0,0,0,0,0,1.5870805215462,10.0438654905023,0.462175628631418,6.48939843185684,0,0,0,0,0,0,0,0,0,0,0,0,4.76128862927481,0,0.0620747142958579,0,0,0.808468755832877,0,2.05339980651169,0,0,1.99596213927608,0,0,0,0,2.34640942403454,0,1.22068853494722,0,0,0 | ||
|short_description=p4@POSTN | |short_description=p4@POSTN | ||
}} | }} |
Latest revision as of 06:46, 17 September 2015
Short description: | p4@POSTN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_POSTN_5end |
Coexpression cluster: | C349_Mesothelial_Fibroblast_Preadipocyte_Ewing_mesenchymal_Skeletal_Smooth |
Association with transcript: | 138bp_to_ENST00000473823_5end |
EntrezGene: | POSTN |
HGNC: | 16953 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of tunica adventitia of artery | 5.68e-11 | 4 |
fibroblast of the aortic adventitia | 5.68e-11 | 4 |
preadipocyte | 7.70e-11 | 12 |
fibroblast | 2.10e-09 | 76 |
preadipocyte of the breast | 2.23e-09 | 3 |
Ontology term | p-value | n |
---|---|---|
artery wall | 5.68e-11 | 4 |
tunica adventitia of artery | 5.68e-11 | 4 |
adventitia | 5.68e-11 | 4 |
tunica adventitia of blood vessel | 5.68e-11 | 4 |
aorta tunica adventitia | 5.68e-11 | 4 |
aorta wall | 5.68e-11 | 4 |
blood vessel layer | 2.63e-09 | 7 |