FFCP PHASE1:Mm9::chr4:40186812..40186864,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=230073 | |EntrezGene=230073 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=542 | |||
|TSSclassifier=NA | |||
|UniProt=Q6Q899,E9Q0T5,A1L0V6,Q3U1I9 | |UniProt=Q6Q899,E9Q0T5,A1L0V6,Q3U1I9 | ||
|association_with_transcript=0bp_to_ENSMUST00000037907,ENSMUST00000108111,ENSMUST00000149539,NM_172689,uc008shf.1,uc008shg.1,uc008shh.1,uc012dbu.1_5end | |association_with_transcript=0bp_to_ENSMUST00000037907,ENSMUST00000108111,ENSMUST00000149539,NM_172689,uc008shf.1,uc008shg.1,uc008shh.1,uc012dbu.1_5end | ||
|cluster_id=chr4:40186812..40186864,- | |||
|description=CAGE_peak_1_at_Ddx58_5end | |description=CAGE_peak_1_at_Ddx58_5end | ||
|id=chr4:40186812..40186864,- | |id=chr4:40186812..40186864,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!6.45e-11!130;UBERON:0000925!6.45e-11!130;UBERON:0006595!6.45e-11!130;UBERON:0001007!2.64e-10!128;UBERON:0001555!2.64e-10!128;UBERON:0007026!2.64e-10!128;UBERON:0004921!4.99e-10!126;UBERON:0004185!4.99e-10!126;UBERON:0003104!1.55e-09!131;UBERON:0009142!1.55e-09!131;UBERON:0000926!2.07e-09!193;UBERON:0004120!2.07e-09!193;UBERON:0006603!2.07e-09!193;UBERON:0005256!4.44e-07!47 | |ontology_enrichment_uberon=UBERON:0004119!6.45e-11!130;UBERON:0000925!6.45e-11!130;UBERON:0006595!6.45e-11!130;UBERON:0001007!2.64e-10!128;UBERON:0001555!2.64e-10!128;UBERON:0007026!2.64e-10!128;UBERON:0004921!4.99e-10!126;UBERON:0004185!4.99e-10!126;UBERON:0003104!1.55e-09!131;UBERON:0009142!1.55e-09!131;UBERON:0000926!2.07e-09!193;UBERON:0004120!2.07e-09!193;UBERON:0006603!2.07e-09!193;UBERON:0005256!4.44e-07!47 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004119,3.30e-12,118;UBERON:0000925,3.30e-12,118;UBERON:0006595,3.30e-12,118;UBERON:0001007,1.47e-11,116;UBERON:0001555,1.47e-11,116;UBERON:0007026,1.47e-11,116;UBERON:0004921,2.80e-11,114;UBERON:0002100,4.65e-08,90;UBERON:0005256,8.34e-08,45;UBERON:0003104,4.24e-07,61;UBERON:0009142,4.24e-07,61 | |||
|phase1_expression=6.72625157840135,18.8446720125255,19.5649672937501,45.0671674847177,41.0734498556005,6.88305014838748,10.5125688267987,48.9377395843574,9.01047821770667,8.19225842126977,2.56826952338257,0.957265907944037,83.5459562064284,76.1431705069467,12.6581709489952,18.0202987976945,4.89693314689703,64.6697438984387,74.0417941470989,50.9267582157636,18.6244805430843,11.2198774857,15.4107875591972,15.9992422793407,15.3704218315004,22.9692785646008,10.7690499039769,14.4365725899546,37.0545667939929,46.1215137460673,11.9734475753865,0.635030673459631,0,0,6.64358725427932,6.64938581433969,6.94175811292055,78.2654149478017,52.3494680830946,89.5225602195195,89.9994176687452,83.3315491649304,74.7685943667977,39.6574976623068,31.8323564029276,23.1268907723719,21.9069576417451,3.48840250208714,10.1055644057857,10.8880743481599,17.778275546421,0,33.5565212115473,38.4441935266013,37.642505503956,39.1034342774639,29.7994777536307,35.5813743671435,0.404632921719196,0,0.633831403506179,6.77689064138264,16.0073063300005,10.3488467487361,9.88866362566974,7.8152812644071,4.19440154725767,2.30530983192933,1.14058573539325,0.675029691658453,0.630974884054146,2.28520787523043,1.98781686856452,0.367472397644862,0.862609239164127,0.919218786610021,2.20231761998777,3.19218345212969,2.15049146558741,0.395658863190582,0.457438218012048,0,3.90856198601933,4.50210088025344,3.81995619442025,4.71405736757868,2.56269025438385,0.745597783301202,25.5954533466162,30.7576249634617,40.0012994408315,34.4169550792555,3.39985666853875,16.1910957491345,31.1892680374881,22.8493712419641,20.2239964989723,16.8726019352277,11.4305842025262,7.0667914902068,5.49289337129054,19.2489716121477,10.1922095882658,7.11066703153331,5.84525810730278,7.34743609877786,5.56076889516262,25.8055568165076,84.9316258362723,33.2510391505207,4.16364784238726,12.4830846107978,14.0675453326196,32.5560903593665,24.9288059127694,30.2856485104518,47.9558237404685,39.7648231529757,24.7690954545965,10.8383789464764,15.2380647737672,14.0613823409214,14.9113408974498,3.22058876712702,1.25668024088073,33.4648742323255,4.31334448221313,1.79970819298022,3.43089613097275,3.14560342750128,5.03250663100489,1.25654352112864,3.65031072403781,2.81287003063364,4.77912502486988,3.0825839982874,12.7299204812895,20.029522268225,19.9650979162603,20.2024181651015,2.73252930221678,1.60931473103431,3.42118046630164,4.82255417074288,5.23881043465224,6.53379973452734,3.5606655332697,10.0894314588216,3.88022387279116,5.29497024469894,4.39877810409872,6.79506770525482,7.50727572909114,9.05455632957633,11.7295817752528,7.36426787228425,0,2.83082697826187,1.98914449576915,2.89976081549703,7.50483391939508,8.64297895012871,9.2330446878232,9.83821158737019,9.41029388613007,13.4869687955237,13.1453966685813,12.4938916332871,8.55711219550098,12.3125598059321,16.5380371473546,16.2281986042119,20.6377108373588,15.5679445762031,4.20579897128254,2.05809224758569,65.7533378137758,58.9724763659704,3.41261200856374,5.57368012465052,5.02583099156164,12.5043785266472,17.5678654637448,35.1917408308234,43.6566736620951,45.951008367999,38.7056221552415,44.1683367931355,41.5273505563726,51.2327062932906,43.2276099749388,34.8497228195143,3.60369011810855,5.36968009265725,5.63538678365402,8.5533557695032,16.8738663835834,14.307707257625,17.9591765432891,21.8463019009811,25.5907926381441,20.2371348831753,18.3800628794032,3.50374722003798,4.52085688760367,6.52100125916076,8.92584534109413,9.64708639009667,11.9674150337267,35.3866249064497,19.7804976665543,23.0631587077988,31.629005436018,25.3055844414582,36.5084077544036,32.8352541331245,37.4940594260796,17.3679667690812,48.0358294433172,3.7898282354097,5.0519142697028,7.1292936025579,10.0916806764056,16.5831194867398,26.6608877792335,26.5381761086606,28.059055650902,27.9045508957456,29.1802226643201,42.9321884555234,39.717545829156,43.6840156916165,60.3165135757089,97.359117403549,16.7199852826472,21.7990029580739,4.81651769963376,3.6335622843583,9.3442918864705,9.08895337935743,4.73262329124385,6.63745865304285,2.36965737506079,8.84184552424442,8.24355094104858,5.09537755419898,4.85772842009873,4.38383786866968,5.53402889125133,4.17717711348349,18.7360912474915,11.2181330310371,11.5649741141039,32.4991142255895,5.30980553359851,5.34117399540959,4.83717691143602,6.60117779145643,5.31543407185391,13.8345816574767,25.5844010236539,10.9060118843252,12.83390562185,11.6933600436252,10.5418608574999,7.21948802737308,12.9367050186439,4.68158844481407,6.07985813778946,5.78709994585299,7.44828981297549,8.20496560969525,7.73380396829969,7.91608867697958,25.5792161789444,30.5038182043901,9.70324951441832,13.3557864882599,13.2400829890643,10.072258463002,8.8335534562321,7.05805868903763,44.3050871677373,5.00648315428376,20.6753765765402,9.70018279427146,37.7796835834212,12.0555812483002,25.2884321283897,28.3684934776088,25.3267860690844,23.7917468950219,23.7703954943609,12.4107180341965,2.37251995185852,9.96265388921559,11.0165447638237,11.7089445768102,12.8833912610245,10.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| |phase1_expression=6.72625157840135,18.8446720125255,19.5649672937501,45.0671674847177,41.0734498556005,6.88305014838748,10.5125688267987,48.9377395843574,9.01047821770667,8.19225842126977,2.56826952338257,0.957265907944037,83.5459562064284,76.1431705069467,12.6581709489952,18.0202987976945,4.89693314689703,64.6697438984387,74.0417941470989,50.9267582157636,18.6244805430843,11.2198774857,15.4107875591972,15.9992422793407,15.3704218315004,22.9692785646008,10.7690499039769,14.4365725899546,37.0545667939929,46.1215137460673,11.9734475753865,0.635030673459631,0,0,6.64358725427932,6.64938581433969,6.94175811292055,78.2654149478017,52.3494680830946,89.5225602195195,89.9994176687452,83.3315491649304,74.7685943667977,39.6574976623068,31.8323564029276,23.1268907723719,21.9069576417451,3.48840250208714,10.1055644057857,10.8880743481599,17.778275546421,0,33.5565212115473,38.4441935266013,37.642505503956,39.1034342774639,29.7994777536307,35.5813743671435,0.404632921719196,0,0.633831403506179,6.77689064138264,16.0073063300005,10.3488467487361,9.88866362566974,7.8152812644071,4.19440154725767,2.30530983192933,1.14058573539325,0.675029691658453,0.630974884054146,2.28520787523043,1.98781686856452,0.367472397644862,0.862609239164127,0.919218786610021,2.20231761998777,3.19218345212969,2.15049146558741,0.395658863190582,0.457438218012048,0,3.90856198601933,4.50210088025344,3.81995619442025,4.71405736757868,2.56269025438385,0.745597783301202,25.5954533466162,30.7576249634617,40.0012994408315,34.4169550792555,3.39985666853875,16.1910957491345,31.1892680374881,22.8493712419641,20.2239964989723,16.8726019352277,11.4305842025262,7.0667914902068,5.49289337129054,19.2489716121477,10.1922095882658,7.11066703153331,5.84525810730278,7.34743609877786,5.56076889516262,25.8055568165076,84.9316258362723,33.2510391505207,4.16364784238726,12.4830846107978,14.0675453326196,32.5560903593665,24.9288059127694,30.2856485104518,47.9558237404685,39.7648231529757,24.7690954545965,10.8383789464764,15.2380647737672,14.0613823409214,14.9113408974498,3.22058876712702,1.25668024088073,33.4648742323255,4.31334448221313,1.79970819298022,3.43089613097275,3.14560342750128,5.03250663100489,1.25654352112864,3.65031072403781,2.81287003063364,4.77912502486988,3.0825839982874,12.7299204812895,20.029522268225,19.9650979162603,20.2024181651015,2.73252930221678,1.60931473103431,3.42118046630164,4.82255417074288,5.23881043465224,6.53379973452734,3.5606655332697,10.0894314588216,3.88022387279116,5.29497024469894,4.39877810409872,6.79506770525482,7.50727572909114,9.05455632957633,11.7295817752528,7.36426787228425,0,2.83082697826187,1.98914449576915,2.89976081549703,7.50483391939508,8.64297895012871,9.2330446878232,9.83821158737019,9.41029388613007,13.4869687955237,13.1453966685813,12.4938916332871,8.55711219550098,12.3125598059321,16.5380371473546,16.2281986042119,20.6377108373588,15.5679445762031,4.20579897128254,2.05809224758569,65.7533378137758,58.9724763659704,3.41261200856374,5.57368012465052,5.02583099156164,12.5043785266472,17.5678654637448,35.1917408308234,43.6566736620951,45.951008367999,38.7056221552415,44.1683367931355,41.5273505563726,51.2327062932906,43.2276099749388,34.8497228195143,3.60369011810855,5.36968009265725,5.63538678365402,8.5533557695032,16.8738663835834,14.307707257625,17.9591765432891,21.8463019009811,25.5907926381441,20.2371348831753,18.3800628794032,3.50374722003798,4.52085688760367,6.52100125916076,8.92584534109413,9.64708639009667,11.9674150337267,35.3866249064497,19.7804976665543,23.0631587077988,31.629005436018,25.3055844414582,36.5084077544036,32.8352541331245,37.4940594260796,17.3679667690812,48.0358294433172,3.7898282354097,5.0519142697028,7.1292936025579,10.0916806764056,16.5831194867398,26.6608877792335,26.5381761086606,28.059055650902,27.9045508957456,29.1802226643201,42.9321884555234,39.717545829156,43.6840156916165,60.3165135757089,97.359117403549,16.7199852826472,21.7990029580739,4.81651769963376,3.6335622843583,9.3442918864705,9.08895337935743,4.73262329124385,6.63745865304285,2.36965737506079,8.84184552424442,8.24355094104858,5.09537755419898,4.85772842009873,4.38383786866968,5.53402889125133,4.17717711348349,18.7360912474915,11.2181330310371,11.5649741141039,32.4991142255895,5.30980553359851,5.34117399540959,4.83717691143602,6.60117779145643,5.31543407185391,13.8345816574767,25.5844010236539,10.9060118843252,12.83390562185,11.6933600436252,10.5418608574999,7.21948802737308,12.9367050186439,4.68158844481407,6.07985813778946,5.78709994585299,7.44828981297549,8.20496560969525,7.73380396829969,7.91608867697958,25.5792161789444,30.5038182043901,9.70324951441832,13.3557864882599,13.2400829890643,10.072258463002,8.8335534562321,7.05805868903763,44.3050871677373,5.00648315428376,20.6753765765402,9.70018279427146,37.7796835834212,12.0555812483002,25.2884321283897,28.3684934776088,25.3267860690844,23.7917468950219,23.7703954943609,12.4107180341965,2.37251995185852,9.96265388921559,11.0165447638237,11.7089445768102,12.8833912610245,10.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| ||
|short_description=p1@Ddx58 | |short_description=p1@Ddx58 | ||
}} | }} |
Latest revision as of 22:52, 26 September 2015
Short description: | p1@Ddx58 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ddx58_5end |
Coexpression cluster: | MCL_coexpression_mm9:542 |
Association with transcript: | 0bp_to_ENSMUST00000037907, ENSMUST00000108111, ENSMUST00000149539, NM_172689, uc008shf.1, uc008shg.1, uc008shh.1, uc012dbu.1_5end |
EntrezGene: | Ddx58 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endoderm-derived structure | 3.30e-12 | 118 |
endoderm | 3.30e-12 | 118 |
presumptive endoderm | 3.30e-12 | 118 |
digestive system | 1.47e-11 | 116 |
digestive tract | 1.47e-11 | 116 |
primitive gut | 1.47e-11 | 116 |
subdivision of digestive tract | 2.80e-11 | 114 |
trunk | 4.65e-08 | 90 |
trunk mesenchyme | 8.34e-08 | 45 |
mesenchyme | 4.24e-07 | 61 |
entire embryonic mesenchyme | 4.24e-07 | 61 |