FFCP PHASE1:Hg19::chr13:20805611..20805619,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10804 | |EntrezGene=10804 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=4288 | |HGNC=4288 | ||
|TSSclassifier=strong | |||
|UniProt=O95452 | |UniProt=O95452 | ||
|association_with_transcript=-239bp_to_NM_006783,uc001umz.3_5end | |association_with_transcript=-239bp_to_NM_006783,uc001umz.3_5end | ||
|cluster_id=chr13:20805611..20805619,- | |||
|coexpression_cluster_id=C263 | |||
|description=CAGE_peak_6_at_GJB6_5end | |description=CAGE_peak_6_at_GJB6_5end | ||
|id=chr13:20805611..20805619,- | |id=chr13:20805611..20805619,- | ||
|ontology_enrichment_celltype=CL:0000244!5.82e-18!4;CL:0000731!5.82e-18!4;CL:0000775!8.19e-14!3;CL:0000094!5.98e-09!8 | |ontology_enrichment_celltype=CL:0000244!5.82e-18!4;CL:0000731!5.82e-18!4;CL:0000775!8.19e-14!3;CL:0000094!5.98e-09!8 | ||
|ontology_enrichment_celltype_v019=CL:0000244;6.58e-45;4!CL:0000731;6.58e-45;4!CL:0000775;2.55e-27;3!CL:0000094;7.46e-23;8!CL:0000081;7.90e-17;11!CL:0000771;3.52e-11;2!CL:0000307;7.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,5.66e-45,4;CL:0000731,5.66e-45,4;CL:0000775,3.11e-27,3;CL:0000094,8.05e-23,8;CL:0000081,8.34e-17,11;CL:0000771,3.35e-11,2;CL:0000068,8.29e-08,3;CL:0000069,8.29e-08,3;CL:0000307,8.29e-08,3;CL:0000377,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0008814;3.52e-11;2!UBERON:0010056;3.52e-11;2!CL:0000377;7.02e-08;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000365!1.06e-21!5;UBERON:0005910!4.90e-18!6;UBERON:0002148!9.71e-09!2;UBERON:0009662!9.71e-09!2;UBERON:0001042!8.97e-07!10;UBERON:0009145!8.97e-07!10;UBERON:0000974!9.83e-07!10 | |||
|ontology_enrichment_uberon_v019=UBERON:0000365;4.13e-36;5!UBERON:0005910;3.07e-30;6!UBERON:0000486;1.65e-15;12!UBERON:0001723;7.02e-08;3!UBERON:0001033;7.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,3.66e-36,5;UBERON:0005910,2.78e-30,6;UBERON:0001723,5.93e-08,3;UBERON:0001033,5.93e-08,3;UBERON:0010056,5.93e-08,3 | |||
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| ||
|short_description=p6@GJB6 | |short_description=p6@GJB6 | ||
}} | }} |
Latest revision as of 18:49, 16 September 2015
Short description: | p6@GJB6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_GJB6_5end |
Coexpression cluster: | C263_cervical_keratoacanthoma_tongue_skin_esophagus_throat_tonsil |
Association with transcript: | -239bp_to_NM_006783, uc001umz.3_5end |
EntrezGene: | GJB6 |
HGNC: | 4288 |
UniProt: | O95452 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 5.66e-45 | 4 |
urothelial cell | 5.66e-45 | 4 |
neutrophil | 3.11e-27 | 3 |
granulocyte | 8.05e-23 | 8 |
blood cell | 8.34e-17 | 11 |
eosinophil | 3.35e-11 | 2 |
duct epithelial cell | 8.29e-08 | 3 |
branched duct epithelial cell | 8.29e-08 | 3 |
tracheal epithelial cell | 8.29e-08 | 3 |
tracheoblast | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
urothelium | 3.66e-36 | 5 |
transitional epithelium | 2.78e-30 | 6 |
tongue | 5.93e-08 | 3 |
gustatory system | 5.93e-08 | 3 |
future tongue | 5.93e-08 | 3 |