FFCP PHASE1:Mm9::chr4:106595836..106595881,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=72475 | |EntrezGene=72475 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=64 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=6bp_to_ENSMUST00000138475,uc008tyz.1_5end | |association_with_transcript=6bp_to_ENSMUST00000138475,uc008tyz.1_5end | ||
|cluster_id=chr4:106595836..106595881,+ | |||
|description=CAGE_peak_3_at_Ssbp3_5end | |description=CAGE_peak_3_at_Ssbp3_5end | ||
|id=chr4:106595836..106595881,+ | |id=chr4:106595836..106595881,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000050,2.44e-11,9;CL:0000764,9.40e-10,3;CL:0000765,9.40e-10,3;CL:0000038,9.40e-10,3;CL:0000547,9.40e-10,3;CL:0002027,2.75e-09,3;CL:0002006,2.75e-09,3;CL:0002024,2.75e-09,3;CL:0000839,1.33e-07,13 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,9.40e-10,3;DOID:0060083,9.40e-10,3;DOID:1240,9.40e-10,3 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,9.34e-12,6;UBERON:0004457,9.34e-12,6;UBERON:0000042,9.34e-12,6;UBERON:0004854,9.34e-12,6;UBERON:0009034,9.34e-12,6;UBERON:0002095,9.34e-12,6;UBERON:0004782,9.34e-12,6;UBERON:0003281,9.34e-12,6;UBERON:0009664,9.34e-12,6;UBERON:0002296,9.34e-12,6;UBERON:0005602,9.34e-12,6;UBERON:0001179,9.34e-12,6;UBERON:0006293,9.34e-12,6;UBERON:0005172,1.62e-10,49;UBERON:0005173,1.62e-10,49;UBERON:0002417,1.62e-10,49;UBERON:0000916,1.62e-10,49;UBERON:0003887,1.54e-09,10;UBERON:0002107,2.73e-08,22;UBERON:0007499,2.73e-08,22;UBERON:0006925,2.73e-08,22;UBERON:0009497,2.73e-08,22;UBERON:0000015,2.73e-08,22;UBERON:0002423,2.73e-08,22;UBERON:0006235,2.73e-08,22;UBERON:0008835,2.73e-08,22;UBERON:0003894,2.73e-08,22;UBERON:0004161,2.73e-08,22;UBERON:0008836,2.73e-08,22;UBERON:0009854,7.37e-08,23;UBERON:0009856,7.37e-08,23;UBERON:0002365,4.21e-07,25;UBERON:0002330,4.21e-07,25;UBERON:0009569,6.58e-07,66 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,12.9912807108108,20.6524772737622,19.5877325875881,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,39.3719017544971,41.2093407681662,237.722521523158,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,1.04091196059682,0.913396434936424,0.461230994512117,0,0.23517741427141,0,0,0,2.65383165584962,0.808834249737046,5.30019644304944,5.81850303762267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,4.10543003013307,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0,0.862271971731369,0.378212160335639,0.703804496655795,0,0,0,0,0.398068533636986,0,0,0,1.65700618028402,1.64168241986767,1.80062061461015,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0.243206428637567,0.438599962275997,0.219550115291051,0.134206418760372,0,0,0,0,0.426576501070468,0.696710015581316,0.515469845288373,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0,16.8513556773255,12.579775687245,17.5392447660186,11.7658870405332,12.5412123071257,3.56476192493988,4.60313819921297,4.05338066937588,4.94210543738547,0,0.744281895337007,0,0,0,0,0,0.757965647081939,0.325929952884052,0,0,0,0,0,0,0.44292937929755,0,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.971122544619926,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.540183282093931,0.517434735131018,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,17.7705716029767,0.619160603889667,7.59297562215818,13.9392658183471,27.202151316484,17.6159193369022,0,0,0,0,0.790839983952838,0.609958401380546,0.108005340821801,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.496375471371293,0,0,0.337912250981556,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,2.21953687480374,0.972426868273176,3.35381060204772,1.10306105070008,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,1.2673964994512,0.754505365544305,0.561849044819294,0.384150914429216,0.516919220600519,0.476293691283074,0.463537303779422,0.77163688185482,0.824171801606613,0.147198920134397,0,0.354951612318675,0.715308569841963,1.0174249164263,0.564656282491984,0.507687647350059,0.365855945745545,0.789209134313529,0.543216455383447,1.12228454331548,0.474540072496697,0.394017929502254,0.409231043169689,0.464810523557898,0.385813221962283,0,0.467863216890817,1.07435527024149,0.191288332068843,0.441182838239031,0.927471342481686 | |phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,12.9912807108108,20.6524772737622,19.5877325875881,0.157731082679119,0,0,0,0.0992909512008853,0,0,0,0,0,0,0,0,0,39.3719017544971,41.2093407681662,237.722521523158,0,0,0,0,0,0,0,0.683045484958446,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.45673551887624,0,0,1.04091196059682,0.913396434936424,0.461230994512117,0,0.23517741427141,0,0,0,2.65383165584962,0.808834249737046,5.30019644304944,5.81850303762267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,4.10543003013307,0,0,0.130120442962704,0,0,0.150704817835715,0.0680364991513279,0,0,0,0.862271971731369,0.378212160335639,0.703804496655795,0,0,0,0,0.398068533636986,0,0,0,1.65700618028402,1.64168241986767,1.80062061461015,0.23674473558521,0,0,0,0.268273401399619,0.233530684734339,0.16455984991348,0,0.243206428637567,0.438599962275997,0.219550115291051,0.134206418760372,0,0,0,0,0.426576501070468,0.696710015581316,0.515469845288373,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0,0,0.140271639780637,0,0.147610147979602,0,0,0,16.8513556773255,12.579775687245,17.5392447660186,11.7658870405332,12.5412123071257,3.56476192493988,4.60313819921297,4.05338066937588,4.94210543738547,0,0.744281895337007,0,0,0,0,0,0.757965647081939,0.325929952884052,0,0,0,0,0,0,0.44292937929755,0,0.327726629431476,0.345369963731791,0.289298117163023,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162886959353576,0.164970122972535,0,0.971122544619926,0,0,0,0.307435147943927,0,0,0.356497378384721,0,0,0,0,0.540183282093931,0.517434735131018,0,0,0.178368817602071,0,0,0.23467170806371,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0,17.7705716029767,0.619160603889667,7.59297562215818,13.9392658183471,27.202151316484,17.6159193369022,0,0,0,0,0.790839983952838,0.609958401380546,0.108005340821801,0.418176592028937,0,0.134864346384821,0,0,0,0,0,0.149516546043979,0.496375471371293,0,0,0.337912250981556,0,0,0,0,0,0,0,0.102710957164827,0,0,0,0,0,0,0,0,0.0974578807397524,0,0,0,0,0,0,0,0.375364950902364,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103787347584177,0.399024873401031,2.21953687480374,0.972426868273176,3.35381060204772,1.10306105070008,0.44449345560323,0.412070114477788,0.320919209591815,0.758091635291392,1.2673964994512,0.754505365544305,0.561849044819294,0.384150914429216,0.516919220600519,0.476293691283074,0.463537303779422,0.77163688185482,0.824171801606613,0.147198920134397,0,0.354951612318675,0.715308569841963,1.0174249164263,0.564656282491984,0.507687647350059,0.365855945745545,0.789209134313529,0.543216455383447,1.12228454331548,0.474540072496697,0.394017929502254,0.409231043169689,0.464810523557898,0.385813221962283,0,0.467863216890817,1.07435527024149,0.191288332068843,0.441182838239031,0.927471342481686 | ||
|short_description=p3@Ssbp3 | |short_description=p3@Ssbp3 | ||
}} | }} |
Latest revision as of 02:42, 26 September 2015
Short description: | p3@Ssbp3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ssbp3_5end |
Coexpression cluster: | MCL_coexpression_mm9:64 |
Association with transcript: | 6bp_to_ENSMUST00000138475, uc008tyz.1_5end |
EntrezGene: | Ssbp3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte-erythroid progenitor cell | 2.44e-11 | 9 |
erythroid lineage cell | 9.40e-10 | 3 |
erythroblast | 9.40e-10 | 3 |
erythroid progenitor cell | 9.40e-10 | 3 |
proerythroblast | 9.40e-10 | 3 |
CD9-positive, CD41-positive megakaryocyte cell | 2.75e-09 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 2.75e-09 | 3 |
Kit-positive megakaryocyte progenitor cell | 2.75e-09 | 3 |
myeloid lineage restricted progenitor cell | 1.33e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
spleen | 9.34e-12 | 6 |
cavity lining | 9.34e-12 | 6 |
serous membrane | 9.34e-12 | 6 |
gastrointestinal system mesentery | 9.34e-12 | 6 |
stomach region | 9.34e-12 | 6 |
mesentery | 9.34e-12 | 6 |
gastrointestinal system serosa | 9.34e-12 | 6 |
mesentery of stomach | 9.34e-12 | 6 |
gut mesentery | 9.34e-12 | 6 |
dorsal mesentery | 9.34e-12 | 6 |
dorsal mesogastrium | 9.34e-12 | 6 |
peritoneal cavity | 9.34e-12 | 6 |
spleen primordium | 9.34e-12 | 6 |
abdomen element | 1.62e-10 | 49 |
abdominal segment element | 1.62e-10 | 49 |
abdominal segment of trunk | 1.62e-10 | 49 |
abdomen | 1.62e-10 | 49 |
intraembryonic coelom | 1.54e-09 | 10 |
liver | 2.73e-08 | 22 |
epithelial sac | 2.73e-08 | 22 |
digestive gland | 2.73e-08 | 22 |
epithelium of foregut-midgut junction | 2.73e-08 | 22 |
anatomical boundary | 2.73e-08 | 22 |
hepatobiliary system | 2.73e-08 | 22 |
foregut-midgut junction | 2.73e-08 | 22 |
hepatic diverticulum | 2.73e-08 | 22 |
liver primordium | 2.73e-08 | 22 |
septum transversum | 2.73e-08 | 22 |
liver bud | 2.73e-08 | 22 |
digestive tract diverticulum | 7.37e-08 | 23 |
sac | 7.37e-08 | 23 |
exocrine gland | 4.21e-07 | 25 |
exocrine system | 4.21e-07 | 25 |
subdivision of trunk | 6.58e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 9.40e-10 | 3 |
immune system cancer | 9.40e-10 | 3 |
leukemia | 9.40e-10 | 3 |