FFCP PHASE1:Mm9::chr3:69402744..69402796,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=26879 | |EntrezGene=26879 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q920V1 | |UniProt=Q920V1 | ||
|association_with_transcript=0bp_to_ENSMUST00000061826,NM_020026,uc008pmj.1_5end | |association_with_transcript=0bp_to_ENSMUST00000061826,NM_020026,uc008pmj.1_5end | ||
|cluster_id=chr3:69402744..69402796,- | |||
|description=CAGE_peak_1_at_B3galnt1_5end | |description=CAGE_peak_1_at_B3galnt1_5end | ||
|id=chr3:69402744..69402796,- | |id=chr3:69402744..69402796,- | ||
|ontology_enrichment_celltype=CL:0000117!2.36e-13!23;CL:0000337!2.36e-13!23;CL:0000393!2.51e-12!39;CL:0000211!2.51e-12!39;CL:0000540!3.50e-12!33;CL:0000047!3.50e-12!33;CL:0000031!3.50e-12!33;CL:0000404!3.50e-12!33;CL:0002319!1.45e-10!43;CL:0000055!3.31e-10!50;CL:0000221!4.09e-10!44;CL:0000133!4.09e-10!44 | |ontology_enrichment_celltype=CL:0000117!2.36e-13!23;CL:0000337!2.36e-13!23;CL:0000393!2.51e-12!39;CL:0000211!2.51e-12!39;CL:0000540!3.50e-12!33;CL:0000047!3.50e-12!33;CL:0000031!3.50e-12!33;CL:0000404!3.50e-12!33;CL:0002319!1.45e-10!43;CL:0000055!3.31e-10!50;CL:0000221!4.09e-10!44;CL:0000133!4.09e-10!44 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.40e-13,23;CL:0000337,1.40e-13,23;CL:0000393,1.55e-12,39;CL:0000211,1.55e-12,39;CL:0000540,2.18e-12,33;CL:0000047,2.18e-12,33;CL:0000031,2.18e-12,33;CL:0000404,2.18e-12,33;CL:0002319,9.71e-11,43;CL:0000221,2.80e-10,44;CL:0000133,2.80e-10,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.40e-29!73;UBERON:0005743!2.40e-29!73;UBERON:0002346!1.28e-28!71;UBERON:0003075!1.28e-28!71;UBERON:0007284!1.28e-28!71;UBERON:0000073!1.92e-28!75;UBERON:0001016!1.92e-28!75;UBERON:0004121!1.58e-27!102;UBERON:0000924!1.58e-27!102;UBERON:0006601!1.58e-27!102;UBERON:0001049!3.75e-26!52;UBERON:0005068!3.75e-26!52;UBERON:0006241!3.75e-26!52;UBERON:0007135!3.75e-26!52;UBERON:0000955!7.54e-25!50;UBERON:0006238!7.54e-25!50;UBERON:0002616!2.80e-24!49;UBERON:0000033!4.90e-24!63;UBERON:0003056!1.90e-22!49;UBERON:0003080!3.79e-21!40;UBERON:0002780!1.62e-20!39;UBERON:0001890!1.62e-20!39;UBERON:0006240!1.62e-20!39;UBERON:0002020!2.63e-19!34;UBERON:0002791!2.90e-16!29;UBERON:0003528!2.90e-16!29;UBERON:0001893!2.90e-16!29;UBERON:0000956!1.27e-11!21;UBERON:0001869!1.27e-11!21;UBERON:0000203!1.27e-11!21;UBERON:0000153!1.22e-10!94;UBERON:0007811!1.92e-10!86;UBERON:0002619!7.33e-10!17;UBERON:0000468!1.47e-08!333;UBERON:0002021!3.80e-08!10;UBERON:0000411!3.80e-08!10;UBERON:0001950!3.80e-08!10 | |ontology_enrichment_uberon=UBERON:0001017!2.40e-29!73;UBERON:0005743!2.40e-29!73;UBERON:0002346!1.28e-28!71;UBERON:0003075!1.28e-28!71;UBERON:0007284!1.28e-28!71;UBERON:0000073!1.92e-28!75;UBERON:0001016!1.92e-28!75;UBERON:0004121!1.58e-27!102;UBERON:0000924!1.58e-27!102;UBERON:0006601!1.58e-27!102;UBERON:0001049!3.75e-26!52;UBERON:0005068!3.75e-26!52;UBERON:0006241!3.75e-26!52;UBERON:0007135!3.75e-26!52;UBERON:0000955!7.54e-25!50;UBERON:0006238!7.54e-25!50;UBERON:0002616!2.80e-24!49;UBERON:0000033!4.90e-24!63;UBERON:0003056!1.90e-22!49;UBERON:0003080!3.79e-21!40;UBERON:0002780!1.62e-20!39;UBERON:0001890!1.62e-20!39;UBERON:0006240!1.62e-20!39;UBERON:0002020!2.63e-19!34;UBERON:0002791!2.90e-16!29;UBERON:0003528!2.90e-16!29;UBERON:0001893!2.90e-16!29;UBERON:0000956!1.27e-11!21;UBERON:0001869!1.27e-11!21;UBERON:0000203!1.27e-11!21;UBERON:0000153!1.22e-10!94;UBERON:0007811!1.92e-10!86;UBERON:0002619!7.33e-10!17;UBERON:0000468!1.47e-08!333;UBERON:0002021!3.80e-08!10;UBERON:0000411!3.80e-08!10;UBERON:0001950!3.80e-08!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,6.94e-30,73;UBERON:0001016,5.79e-29,75;UBERON:0002346,3.48e-28,64;UBERON:0003075,3.48e-28,64;UBERON:0007284,3.48e-28,64;UBERON:0000073,4.43e-28,54;UBERON:0001049,1.25e-26,52;UBERON:0005068,1.25e-26,52;UBERON:0006241,1.25e-26,52;UBERON:0007135,1.25e-26,52;UBERON:0004121,3.96e-26,95;UBERON:0000924,3.96e-26,95;UBERON:0006601,3.96e-26,95;UBERON:0000955,2.43e-23,47;UBERON:0006238,2.43e-23,47;UBERON:0010371,6.62e-23,73;UBERON:0003056,7.50e-23,49;UBERON:0002616,9.04e-23,46;UBERON:0003080,1.58e-21,40;UBERON:0002780,6.96e-21,39;UBERON:0001890,6.96e-21,39;UBERON:0006240,6.96e-21,39;UBERON:0002020,1.19e-19,34;UBERON:0010314,3.46e-18,92;UBERON:0003528,1.51e-16,29;UBERON:0002791,1.51e-16,29;UBERON:0001893,1.51e-16,29;UBERON:0000956,8.12e-12,21;UBERON:0001869,8.12e-12,21;UBERON:0000203,8.12e-12,21;UBERON:0002619,5.07e-10,17;UBERON:0002021,2.83e-08,10;UBERON:0000411,2.83e-08,10;UBERON:0001950,2.83e-08,10 | |||
|phase1_expression=3.68342348341026,0,0.454999239389536,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0.699561878128147,0,0,0,7.05859308253879,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,21.2765622378726,20.7822709000005,33.405508893426,3.9119567217402,2.18025156380447,4.83309602015838,6.02732687130279,8.9591309840232,4.31257693094915,0,0,0,2.05807548828758,2.0057340795713,2.57836046138721,25.4918740683093,33.8554226734101,25.9870875437533,6.09920157724438,6.22506357277798,5.84934816232909,8.89979726310277,7.104801149461,5.09320187881288,1.92109152660777,13.6870288247191,17.010748229793,15.7743721013537,30.8503063156108,34.4554923884517,17.0262210908786,17.6355666673555,14.7075005857603,39.6417171597799,27.7081523644857,29.646060918455,32.0483679184371,39.3396867490361,42.1939830150976,29.314214895145,36.5795696520592,31.0180442986925,30.6413728892614,36.4471502845704,30.383109669524,1.74170244666323,3.55186332501892,0.869593466105033,0,0,0,0,0,2.94933282276679,3.57903677413921,2.59786004602869,3.18005617059306,1.54927761754349,0,0,0,0.216491041011214,0.253359865475099,0.505524445014783,1.25602267690966,1.8125651855302,6.23456984072264,6.59244241711316,9.13396434936424,5.76538743140146,7.83757730873637,7.52567725668511,4.39833069653864,14.0901131608593,2.16899035379867,0,3.558870698843,0.883366073841574,1.45462575940567,9.31958806090611,27.2286141220739,23.2485844562935,1.02182822083437,0,0,0,33.4033125872755,22.4175295381127,26.2617595915887,34.591039718263,41.6816195448439,36.5706958424826,27.418773458451,6.72139801412087,1.61729061793121,0.505445516867349,1.89397670297827,5.33493816147085,10.1156925950728,12.4242869565691,7.68594570962147,7.27990540919208,9.35230158079403,10.1197862524507,8.79591460512653,3.44908788692548,7.75334928688059,6.15828934573821,5.47989331068937,5.56094498451196,4.52727816478817,4.11564272815887,4.17971960318836,0,0,0.284163499395593,2.48550927042602,2.11073453982987,2.16074473753218,2.60419209143731,1.96764231747404,2.00547246753592,1.62773761325285,0.536546802799238,0.934122738937356,2.13927804887525,0.656669856316381,0.56748166682099,0.584799949701329,1.3173006917463,1.61047702512446,28.5994330047213,28.5045776290618,0,0.264450566663544,4.47905326123991,6.0381534683714,3.73715637834071,3.83198696784351,2.2237804384487,3.42406127002606,1.89811624617805,3.62337700392824,4.27269854960458,4.77495532898762,5.45899443933536,1.79763881730844,2.16138049874694,1.1948476395262,4.74169752382704,3.54170389090159,2.25415471346161,5.09128319613286,5.04276466635827,2.38461787627083,4.23684798732524,4.72352473534727,7.22194148070324,5.92306386824642,0,0.667380422864376,0.982794975566015,0.224862112384854,2.02860121388503,0.241177159752417,1.2731292589071,0.575392274901621,0.486405680325106,0.549122826376163,0,0.372140947668503,0.312037673114561,0.505157755894224,0.358794827043824,0.964887042726734,1.66277871149944,4.9267767060326,3.25929952884052,3.22515662972857,2.81628297946203,2.01007508930179,1.90434912708811,2.73187107000918,2.04925687338048,3.5434350343804,1.59454768657487,0.983179888294428,2.24490476425664,1.88043776155965,3.01582567878545,2.17562273527484,0.983528546038072,1.10374698521893,25.3669932180711,27.4275346625755,10.3279015587306,2.01976741763498,5.67914794949262,5.0757036758563,6.46270193198397,2.62865677747807,2.89638276307112,3.96307143104365,9.71545684019746,6.42962887404886,7.90575555893047,26.9909905794318,8.65834519770439,8.90328018336276,7.4928001302645,7.09371528781903,0,2.42780636154981,1.51161778482376,2.07465587731488,2.36241514304618,3.68922177532713,4.39328098385976,2.54473610634254,6.41695281092498,1.8962205476149,0,0,20.4263763452273,8.46287141947158,10.6074120701859,9.21649250635847,11.8817956540323,14.9829806785739,18.2649412868354,17.3545020995322,11.0295702789944,6.99045833850607,2.8668691747145,2.30840754118072,3.71368181400583,3.19658502119226,1.55184047204077,0.492422699235184,1.45740418314925,25.4032663754398,0.854354403989263,2.68302928352189,1.11116716421827,0,0,0.457556346413045,0,0.279902904647316,0.276399947608848,0.954670618015114,3.95419991976419,3.25311147402958,6.37231510848627,3.76358932826044,5.8957892211468,5.66430254816247,3.55409859618945,2.6175594198403,1.8146096260851,1.86401793926078,10.1464728963154,4.03694674318743,5.12921320417003,4.27792614356905,6.07051170345336,5.06868376472335,5.04636126176742,5.208175393758,3.8797957437513,26.3326691700347,9.79302021276743,0.632022241256357,5.6763060281246,4.93012594391171,2.7283372825337,1.79026695667481,1.98681354781265,0.480781798079875,0.886137163047463,0.504832249740738,0.381034033274999,0.604957110821043,0.194915761479505,0.0962118416403295,0.467507608726276,1.36038230169127,1.55390167361845,0.0897138566094757,0.671538465456314,4.25017106870819,12.387043379778,4.39563898241436,1.2862102744744,0,50.2629139929189,54.3183779078469,64.7371930186518,44.3381210446714,63.0275918188991,47.5898155355511,60.7520250208625,35.5753750547134,41.6891016265468,37.278742446131,2.28332164685189,7.5814725946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| ||
|short_description=p1@B3galnt1 | |short_description=p1@B3galnt1 | ||
}} | }} |
Latest revision as of 16:36, 25 September 2015
Short description: | p1@B3galnt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_B3galnt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000061826, NM_020026, uc008pmj.1_5end |
EntrezGene: | B3galnt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.40e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.40e-13 | 23 |
electrically responsive cell | 1.55e-12 | 39 |
electrically active cell | 1.55e-12 | 39 |
neuron | 2.18e-12 | 33 |
neuronal stem cell | 2.18e-12 | 33 |
neuroblast | 2.18e-12 | 33 |
electrically signaling cell | 2.18e-12 | 33 |
neural cell | 9.71e-11 | 43 |
ectodermal cell | 2.80e-10 | 44 |
neurectodermal cell | 2.80e-10 | 44 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 6.94e-30 | 73 |
nervous system | 5.79e-29 | 75 |
neurectoderm | 3.48e-28 | 64 |
neural plate | 3.48e-28 | 64 |
presumptive neural plate | 3.48e-28 | 64 |
regional part of nervous system | 4.43e-28 | 54 |
neural tube | 1.25e-26 | 52 |
neural rod | 1.25e-26 | 52 |
future spinal cord | 1.25e-26 | 52 |
neural keel | 1.25e-26 | 52 |
ectoderm-derived structure | 3.96e-26 | 95 |
ectoderm | 3.96e-26 | 95 |
presumptive ectoderm | 3.96e-26 | 95 |
brain | 2.43e-23 | 47 |
future brain | 2.43e-23 | 47 |
ecto-epithelium | 6.62e-23 | 73 |
pre-chordal neural plate | 7.50e-23 | 49 |
regional part of brain | 9.04e-23 | 46 |
anterior neural tube | 1.58e-21 | 40 |
regional part of forebrain | 6.96e-21 | 39 |
forebrain | 6.96e-21 | 39 |
future forebrain | 6.96e-21 | 39 |
gray matter | 1.19e-19 | 34 |
structure with developmental contribution from neural crest | 3.46e-18 | 92 |
brain grey matter | 1.51e-16 | 29 |
regional part of telencephalon | 1.51e-16 | 29 |
telencephalon | 1.51e-16 | 29 |
cerebral cortex | 8.12e-12 | 21 |
cerebral hemisphere | 8.12e-12 | 21 |
pallium | 8.12e-12 | 21 |
regional part of cerebral cortex | 5.07e-10 | 17 |
occipital lobe | 2.83e-08 | 10 |
visual cortex | 2.83e-08 | 10 |
neocortex | 2.83e-08 | 10 |