Swissregulon:TAL1 TCF(3,4,12).p1: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{SwissregulonMotif
|datasource=http://www.swissregulon.unibas.ch/
|name=TAL1_TCF{3,4,12}.p1
|associated_transcription_factors=1.000:6929:TCF3:transcription factor 3 (E2A i...") |
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{{SwissregulonMotif | {{SwissregulonMotif | ||
|associated_transcription_factors=1.000:6929:TCF3:transcription factor 3 (E2A immunoglobulin enhancer binding factors E12/E47)::NM_003200:E2A,ITF1,MGC129647,MGC129648,bHLHb21;1.000:6925:TCF4:transcription factor 4::NM_001083962:SEF2-1B,ITF2,bHLHb19;1.000:6886:TAL1:T-cell acute lymphocytic leukemia 1::NM_003189:SCL,bHLHa17;0.963:6938:TCF12:transcription factor 12::NM_003205:HEB,HTF4,HsT17266,bHLHb20 | |||
|datasource=http://www.swissregulon.unibas.ch/ | |datasource=http://www.swissregulon.unibas.ch/ | ||
|gostat_on_mara_hg19=GO:0030016!myofibril!2.96290201458366e-05!4626;4606;1756;4619;27063$GO:0044449!contractile fiber part!2.96290201458366e-05!4626;4606;1756;4619;27063$GO:0043292!contractile fiber!2.96290201458366e-05!4626;4606;1756;4619;27063$GO:0030017!sarcomere!0.000334041800844216!4626;4606;4619;27063$GO:0032982!myosin filament!0.000379141648407042!4626;4606;4619$GO:0005863!striated muscle thick filament!0.000379141648407042!4626;4606;4619$GO:0005859!muscle myosin complex!0.00130285947490792!4626;4606;4619$GO:0016460!myosin II complex!0.00130285947490792!4626;4606;4619$GO:0006941!striated muscle contraction!0.00341092006280819!4626;4606;4619$GO:0008307!structural constituent of muscle!0.0045057093796975!4626;4606;1756$GO:0015125!bile acid transmembrane transporter activity!0.00918632773157885!1109;201780$GO:0003779!actin binding!0.00918632773157885!4626;4606;4892;1756;4983;4619$GO:0006936!muscle contraction!0.0124179349164802!4626;4606;1756;4619$GO:0003012!muscle system process!0.0124179349164802!4626;4606;1756;4619$GO:0008028!monocarboxylic acid transmembrane transporter activity!0.0334643458977343!1109;201780$GO:0032501!multicellular organismal process!0.0334643458977343!6252;7050;4619;4606;4626;1756;4211;5631;3290;1411;3233;11005;60506;4983;1638;2793$GO:0008092!cytoskeletal protein binding!0.0347847278058809!4626;4606;4892;1756;4983;4619$GO:0044444!cytoplasmic part!0.0347847278058809!6222;100187828;6252;4619;219970;1743;4626;4606;1756;3290;23213;54978;11005;10550;5954;6293;27063;1638$GO:0016459!myosin complex!0.0376314065920973!4626;4606;4619$GO:0043234!protein complex!0.0410609665203271!6222;100187828;4619;9358;55506;1743;4626;4606;1756;4211;27063;23039;2793 | |||
|gostat_on_mara_mm9= | |||
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|motif_activities_mm9=-0.157458140172,-0.511203773558,-0.094266551664,-0.740643155094,-0.955647912767,-0.625127888039,-0.703183924117,0.0452017317945,-0.475953578328,-0.5681818791,-0.385796924718,-0.71380854963,0.913027061597,0.442334103791,0.012911711868,-0.0356605831216,-0.233674145862,0.435376549758,0.208791316993,0.534122265636,-1.94801974518,-0.735516290691,-0.571986145403,-0.26430552721,-0.356986686645,-0.24614834704,-0.419074331847,-0.743987657703,-1.10101088464,-1.42616592934,-0.52167357834,0.237627794522,0.00401473361246,1.48386484018,-1.90384652533,-1.73093946445,-1.56147127437,-0.277186218705,-0.230329401703,0.149359139624,-0.4125577162,0.18594063476,0.378825778439,-0.139112861662,-0.461636172247,-0.597347808154,0.92661399337,-0.871548555925,-0.572196015083,-0.789037237283,-0.524489416695,0.100018792931,-0.56464679842,0.683601735013,0.334596245637,0.746569080166,1.04863045421,0.886729658252,-0.355051966133,-0.11440678962,-0.0646334572945,0.766017655406,0.404296362957,-1.15442557536,-0.322933951675,-0.388511213604,0.198234368716,-0.640175197482,-0.424791077726,-0.422887950314,-0.499114597831,-0.355675265646,-0.223031983063,-0.309114161331,-0.479678909942,-0.675372873045,0.127979741561,-0.529290474991,-0.421134606072,-0.372938085396,-0.372425490947,-0.615741384549,-0.560819914409,-0.235528408949,-0.0519817304704,-0.0513374640191,-0.109527089758,0.234582064721,-0.608191046604,-0.636614763544,-2.06096038561,-1.09778053601,-0.929112742318,-0.716991996258,-1.27512883893,-1.17366725007,-1.29802035373,-0.647662312629,-0.492980264766,-0.270297832835,-0.82240243454,0.689364035072,0.441062987452,1.3548403796,-0.691099640376,-0.934599040166,-1.08106720638,-1.85339679704,-0.294007885542,-0.352632067617,0.540806895229,0.903047303572,1.04407720438,0.788843058605,0.892306699151,0.238957716546,-0.282615716291,-1.35255286082,0.799143332282,1.91678328147,1.01792296952,1.83084686559,-1.73393560339,-0.0837017625681,-0.186884221406,-1.35126056677,-1.62389396156,-1.48891951081,-1.47003459488,-0.647112293926,0.861035065307,-0.31845224313,1.25801421471,1.31690397225,-0.183819767442,0.242775023927,0.619184927713,1.38848614887,-0.48199956191,0.705961305203,-0.234013365297,0.990480822162,1.41647420827,1.99244434004,2.31631876775,2.7914886948,2.58740100565,2.68186917175,-0.588583304976,-0.162822553618,0.572044561159,0.730061259513,1.12908885752,1.66224453249,1.66653104866,-0.200248649896,-1.28787405349,-1.29955684611,-1.45237804449,-1.4967097031,-1.44827590843,-1.30099711825,-1.29550933617,-1.34271392337,-0.806597775491,-1.15743326474,-0.897814549974,-0.896227858442,-0.624410621423,-0.278313379626,-0.3187245288,-0.14427724874,0.0188815512618,-0.571247964514,1.39520194341,0.695509311324,-0.14928421047,-1.36112192659,-0.891452658044,-0.83866977559,-0.656437394091,-1.25071219769,-0.795377919054,-0.430382254977,-0.561275633708,-0.176607980809,0.881634303364,0.407331714088,0.583032384681,-0.547559598136,-1.11487325646,-0.728217354797,-1.25802808107,-0.9122422765,-1.13307028502,-1.35930932143,-0.95285384651,-0.705650787147,-1.10031222783,-1.28037294209,-1.58431913443,-1.47244212501,-1.1894748139,-0.832542037894,-0.438434133745,-0.79184178565,-0.579611840971,-0.283051824705,-0.69157076629,-0.869991649299,-0.945657634057,-0.500993091006,0.349700327084,-0.492605860711,-0.161961297489,-0.908957073898,-1.04212663324,-0.72841972802,-1.47248570397,-0.519861875337,-0.717175035929,-1.0368720663,-0.636263036229,-0.599100477208,-0.535351222334,-0.50125990163,-0.639327950428,-0.520728286324,-1.06275393878,-0.64766246371,-0.895830714031,-0.490117107892,-0.768895529037,-0.310960913666,-0.63089799343,-0.354113993571,0.100213802426,0.0322216111428,-0.138928363032,1.69731692307,0.253712949697,0.554774144014,0.528032349812,-0.673522202063,-0.425387595078,-0.588797296461,0.212702541201,0.148817750891,0.510616780629,0.15919768901,-1.15911086515,0.692662899038,0.163933546165,-0.628467591136,0.0415537901051,-0.163865221324,0.411509485212,1.3316710524,1.06289860143,1.10877737724,0.897752525338,1.17594707271,1.63609592969,0.826372661511,0.542084923028,1.41335700548,0.669996411167,-0.338331456077,-0.381650142484,0.0496723110068,0.159380834448,0.978577826794,0.907571409974,0.396424610743,-1.32540261907,-0.90136634535,-0.279635357667,1.40440098653,1.36562619876,1.00489404743,0.783550509055,0.497728358855,-0.455030092968,-0.0866057027063,-0.440503834467,0.705303763059,0.168369743211,0.193584606352,0.0214858092987,0.0120603259908,-1.81945305093,-1.85579916966,-2.00216071928,-0.721773244665,-0.531339306677,0.117844870013,-0.128370891502,-0.191104956546,-0.0408527022939,0.23580321941,0.314839745881,-0.518092081685,-1.31361804476,-0.861100118872,-2.65559636994,-0.18929849867,-0.0764522888487,0.0119432580566,0.210201720857,0.00722514145592,0.223913049105,0.279980141353,0.229634930317,-1.53337654586,-1.76205536686,-0.365726730295,0.0532339006732,-0.0230123736624,-0.0543165473544,-0.144382339464,0.15427857834,0.203276357419,0.194126608114,0.088899802702,0.322177287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| |||
|name=TAL1_TCF{3,4,12}.p1 | |name=TAL1_TCF{3,4,12}.p1 | ||
|weight_matrix=NA:TAL1_TCF{3,4,12}.p1;PO:A:C:G:T;01:44.216998:36.977808:26.135055:36.343385;02:43.942752:31.870231:49.17576:18.684503;03:108.474005:9.867871:14.837278:10.494092;04:76.2281079999999:59.834326:3.379906:4.230906;05:11.04325:98.883286:18.631363:15.115347;06:110.979225:0:17.300949:15.393072;07:7.0499:9.163027:29.179808:98.280511;08:8.279439:126.426835:1.493706:7.473266;09:0:0:0:143.673246;10:0:0.920149:137.437847:5.31525;11:1.663912:16.560986:80.044367:45.403981;12:30.168713:34.421003:8.283853:70.799677;13:70.049394:2.46736:18.104509:53.051983;14:23.501833:29.696466:25.134739:65.340208 | |weight_matrix=NA:TAL1_TCF{3,4,12}.p1;PO:A:C:G:T;01:44.216998:36.977808:26.135055:36.343385;02:43.942752:31.870231:49.17576:18.684503;03:108.474005:9.867871:14.837278:10.494092;04:76.2281079999999:59.834326:3.379906:4.230906;05:11.04325:98.883286:18.631363:15.115347;06:110.979225:0:17.300949:15.393072;07:7.0499:9.163027:29.179808:98.280511;08:8.279439:126.426835:1.493706:7.473266;09:0:0:0:143.673246;10:0:0.920149:137.437847:5.31525;11:1.663912:16.560986:80.044367:45.403981;12:30.168713:34.421003:8.283853:70.799677;13:70.049394:2.46736:18.104509:53.051983;14:23.501833:29.696466:25.134739:65.340208 | ||
}} | }} |
Latest revision as of 10:00, 17 April 2012
recognized by
- TCF3 ( EntrezGene:6929 )
- TCF4 ( EntrezGene:6925 )
- TAL1 ( EntrezGene:6886 )
- TCF12 ( EntrezGene:6938 )
(data source: http://www.swissregulon.unibas.ch/)
Motif matrix | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Motif Activities (MARA) on Phase1 data
hg19
Chart |
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Sample of clicked point: |
mm9
Z-value table | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
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Chart |
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Sample of clicked point: |
GOStat results on predicted Motif target
hg19 | ||||||||||||||||||||||||||||||||||||||||||
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