FFCP PHASE1:Mm9::chr2:90875732..90875767,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=19400 | |EntrezGene=19400 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=19 | |||
|TSSclassifier=NA | |||
|UniProt=A2AFX4 | |UniProt=A2AFX4 | ||
|association_with_transcript=-9bp_to_ENSMUST00000111445_5end | |association_with_transcript=-9bp_to_ENSMUST00000111445_5end | ||
|cluster_id=chr2:90875732..90875767,+ | |||
|description=CAGE_peak_4_at_Rapsn_5end | |description=CAGE_peak_4_at_Rapsn_5end | ||
|id=chr2:90875732..90875767,+ | |id=chr2:90875732..90875767,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.47e-15!23;UBERON:0001009!7.47e-15!23;UBERON:0007100!7.37e-14!18;UBERON:0000948!7.37e-14!18;UBERON:0005498!7.37e-14!18;UBERON:0004140!7.37e-14!18;UBERON:0009881!7.37e-14!18;UBERON:0004141!7.37e-14!18;UBERON:0003084!7.37e-14!18;UBERON:0007005!7.37e-14!18;UBERON:0004139!7.37e-14!18;UBERON:0004291!7.37e-14!18;UBERON:0004872!2.06e-09!33;UBERON:0003103!1.93e-08!43 | |ontology_enrichment_uberon=UBERON:0004535!7.47e-15!23;UBERON:0001009!7.47e-15!23;UBERON:0007100!7.37e-14!18;UBERON:0000948!7.37e-14!18;UBERON:0005498!7.37e-14!18;UBERON:0004140!7.37e-14!18;UBERON:0009881!7.37e-14!18;UBERON:0004141!7.37e-14!18;UBERON:0003084!7.37e-14!18;UBERON:0007005!7.37e-14!18;UBERON:0004139!7.37e-14!18;UBERON:0004291!7.37e-14!18;UBERON:0004872!2.06e-09!33;UBERON:0003103!1.93e-08!43 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,1.27e-22,23;UBERON:0001009,1.27e-22,23;UBERON:0007100,1.97e-21,18;UBERON:0000948,1.97e-21,18;UBERON:0005498,1.97e-21,18;UBERON:0004140,1.97e-21,18;UBERON:0009881,1.97e-21,18;UBERON:0004141,1.97e-21,18;UBERON:0003084,1.97e-21,18;UBERON:0007005,1.97e-21,18;UBERON:0004139,1.97e-21,18;UBERON:0004291,1.97e-21,18;UBERON:0004872,5.70e-14,33;UBERON:0003103,3.39e-10,43;UBERON:0003914,3.59e-08,47 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,1.72340783073175,1.83546752161682,0,1.30815093828268,0.439372365468944,0.58328969722285,0.139986421625363,0,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0.259786004602869,0.70667914902068,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,1.48442139064825,0,0.608930956624282,0,0.150722640552623,0.117588707135705,0.628332956648377,0.247194967734374,0.433798070759735,0.884610551949874,1.94120219936891,1.76673214768315,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0.497627882440372,0,0.420883711772948,1.04096354370163,0.459804208866946,0.180062129805349,1.9591626318643,1.2246569847239,1.40925092313335,0.749613796477831,1.81092359517311,0.215567992932842,0,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0,0,0,0,0,2.07125772535502,2.34526059981096,4.14142741360334,4.02466050494857,7.28027657465394,6.78775296704464,4.88321283975857,5.90201483079162,5.13767506415546,4.60767579757745,3.61168420974009,2.67527071501324,4.67839959761063,3.29325172936576,3.48936688776967,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.969762435838129,0.420814919341911,0.822074982615345,1.03327103585722,1.255989822731,1.1105744752962,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.358794827043824,0,0.369506380333209,0,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.472905432318573,0,0.159454768657487,0.81931657357869,1.03610989119537,0,0,0,0,0,0,0,0,6.05930225290495,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,1.69946445308487,1.209294227859,0.377210159511796,0.885905678642318,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0.8244312647074,0.322928853391811,0.241251699712623,0.238744688006273,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0,0,0,0,0,0.26175594198403,0,0.621339313086926,6.20062232552609,0.149516546043979,0,0.194451188344048,0.387479470433193,0.337912250981556,0.117357238645754,0.13020438484395,0,0.483168241652012,2.01621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0,0,0,0.19318959403219,0.750729901804728,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,1.55572709461131,1.64828045791115,0.320919209591815,1.01078884705519,1.52087579934144,1.13175804831646,1.03005658216871,1.15245274328765,1.14870937911227,1.42888107384922,0.695305955669133,0.964546102318525,0,1.47198920134397,1.37147700954166,0.887379030796687,1.66905332963125,1.0174249164263,0.564656282491984,1.09998990259179,1.64635175585495,0.263069711437843,0.950628796921032,0,1.06771516311757,1.18205378850676,0.409231043169689,1.08455788830176,0.771626443924566,2.24829520144151,0.467863216890817,1.71896843238639,2.10417165275728,2.42650561031467,1.85494268496337 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63634199468316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.64383317748712,1.72340783073175,1.83546752161682,0,1.30815093828268,0.439372365468944,0.58328969722285,0.139986421625363,0,0,0,0,0.257259436035947,0.85960031981627,1.03134418455488,0,0,0,0,0,0.449949858640699,0.988866362566974,0,0,1.15265491596466,0,0,0,0.285650984403804,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0.0914876436024097,0,0.279182999001381,0.56276261003168,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.0755715601067855,0,0,0,0,0,0,1.82577746171277,0,0.259786004602869,0.70667914902068,0,0,0,0,0,0,0,0.45673551887624,0.258937883647172,1.48442139064825,0,0.608930956624282,0,0.150722640552623,0.117588707135705,0.628332956648377,0.247194967734374,0.433798070759735,0.884610551949874,1.94120219936891,1.76673214768315,0.484875253135222,0,0,0.209446706813455,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0,0,0,0.497627882440372,0,0.420883711772948,1.04096354370163,0.459804208866946,0.180062129805349,1.9591626318643,1.2246569847239,1.40925092313335,0.749613796477831,1.81092359517311,0.215567992932842,0,0.175951124163949,0.219195732427575,0.834141747676794,0.348252166522167,0,0,0,0,0,2.07125772535502,2.34526059981096,4.14142741360334,4.02466050494857,7.28027657465394,6.78775296704464,4.88321283975857,5.90201483079162,5.13767506415546,4.60767579757745,3.61168420974009,2.67527071501324,4.67839959761063,3.29325172936576,3.48936688776967,0,0,0,0,0,0,0,0,0,0.190225626112559,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0.969762435838129,0.420814919341911,0.822074982615345,1.03327103585722,1.255989822731,1.1105744752962,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0.358794827043824,0,0.369506380333209,0,0.325929952884052,0.169745085775188,0.234690248288502,0.335012514883631,0,0,0.472905432318573,0,0.159454768657487,0.81931657357869,1.03610989119537,0,0,0,0,0,0,0,0,6.05930225290495,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0.162886959353576,0,0,1.69946445308487,1.209294227859,0.377210159511796,0.885905678642318,0.307435147943927,0.516856586336442,0,0,0,0,0,0,0.36012218806262,0,0.214337035031592,0,0.178368817602071,0,0,0,0,0,0.8244312647074,0.322928853391811,0.241251699712623,0.238744688006273,0,0,0.18542530201051,0,0.206386867963223,0,0,0,0.228778173206523,0,0,0,0,0,0.406638934253697,0,0,0,0,0,0.26175594198403,0,0.621339313086926,6.20062232552609,0.149516546043979,0,0.194451188344048,0.387479470433193,0.337912250981556,0.117357238645754,0.13020438484395,0,0.483168241652012,2.01621004380506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.72076460338254,0,0,0,0.19318959403219,0.750729901804728,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0.682934423016537,0.243106717068294,0.209613162627982,0.551530525350042,1.55572709461131,1.64828045791115,0.320919209591815,1.01078884705519,1.52087579934144,1.13175804831646,1.03005658216871,1.15245274328765,1.14870937911227,1.42888107384922,0.695305955669133,0.964546102318525,0,1.47198920134397,1.37147700954166,0.887379030796687,1.66905332963125,1.0174249164263,0.564656282491984,1.09998990259179,1.64635175585495,0.263069711437843,0.950628796921032,0,1.06771516311757,1.18205378850676,0.409231043169689,1.08455788830176,0.771626443924566,2.24829520144151,0.467863216890817,1.71896843238639,2.10417165275728,2.42650561031467,1.85494268496337 | ||
|short_description=p4@Rapsn | |short_description=p4@Rapsn | ||
}} | }} |
Latest revision as of 02:34, 27 September 2015
Short description: | p4@Rapsn |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Rapsn_5end |
Coexpression cluster: | MCL_coexpression_mm9:19 |
Association with transcript: | -9bp_to_ENSMUST00000111445_5end |
EntrezGene: | Rapsn |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 1.27e-22 | 23 |
circulatory system | 1.27e-22 | 23 |
primary circulatory organ | 1.97e-21 | 18 |
heart | 1.97e-21 | 18 |
primitive heart tube | 1.97e-21 | 18 |
primary heart field | 1.97e-21 | 18 |
anterior lateral plate mesoderm | 1.97e-21 | 18 |
heart tube | 1.97e-21 | 18 |
heart primordium | 1.97e-21 | 18 |
cardiac mesoderm | 1.97e-21 | 18 |
cardiogenic plate | 1.97e-21 | 18 |
heart rudiment | 1.97e-21 | 18 |
splanchnic layer of lateral plate mesoderm | 5.70e-14 | 33 |
compound organ | 3.39e-10 | 43 |
epithelial tube | 3.59e-08 | 47 |