FFCP PHASE1:Mm9::chr2:90725607..90725616,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67445 | |EntrezGene=67445 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=189 | |||
|TSSclassifier=NA | |||
|UniProt=Q8R066 | |UniProt=Q8R066 | ||
|association_with_transcript=-326bp_to_ENSMUST00000036860,NM_026161,uc008ktq.1_5end | |association_with_transcript=-326bp_to_ENSMUST00000036860,NM_026161,uc008ktq.1_5end | ||
|cluster_id=chr2:90725607..90725616,+ | |||
|description=CAGE_peak_11_at_C1qtnf4_5end | |description=CAGE_peak_11_at_C1qtnf4_5end | ||
|id=chr2:90725607..90725616,+ | |id=chr2:90725607..90725616,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.91e-11!23;CL:0000337!3.91e-11!23;CL:0002610!2.80e-09!3;CL:0002612!7.99e-08!3;CL:0000540!4.39e-07!33;CL:0000047!4.39e-07!33;CL:0000031!4.39e-07!33;CL:0000404!4.39e-07!33 | |ontology_enrichment_celltype=CL:0000117!3.91e-11!23;CL:0000337!3.91e-11!23;CL:0002610!2.80e-09!3;CL:0002612!7.99e-08!3;CL:0000540!4.39e-07!33;CL:0000047!4.39e-07!33;CL:0000031!4.39e-07!33;CL:0000404!4.39e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.56e-25,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.51e-20!73;UBERON:0005743!3.51e-20!73;UBERON:0000073!1.77e-19!75;UBERON:0001016!1.77e-19!75;UBERON:0003076!2.27e-19!12;UBERON:0003057!2.27e-19!12;UBERON:0001049!5.65e-19!52;UBERON:0005068!5.65e-19!52;UBERON:0006241!5.65e-19!52;UBERON:0007135!5.65e-19!52;UBERON:0000955!1.01e-16!50;UBERON:0006238!1.01e-16!50;UBERON:0002346!1.07e-16!71;UBERON:0003075!1.07e-16!71;UBERON:0007284!1.07e-16!71;UBERON:0004121!2.36e-16!102;UBERON:0000924!2.36e-16!102;UBERON:0006601!2.36e-16!102;UBERON:0002616!3.29e-15!49;UBERON:0000033!3.93e-15!63;UBERON:0002240!2.82e-14!6;UBERON:0005174!2.82e-14!6;UBERON:0001137!2.82e-14!6;UBERON:0001948!5.26e-12!5;UBERON:0002315!5.26e-12!5;UBERON:0002020!2.97e-11!34;UBERON:0002298!1.20e-10!6;UBERON:0007811!1.05e-09!86;UBERON:0004684!2.80e-09!3;UBERON:0002275!2.80e-09!3;UBERON:0000153!1.90e-08!94;UBERON:0002257!7.99e-08!3;UBERON:0004733!2.87e-07!6;UBERON:0004732!2.87e-07!6;UBERON:0002028!2.87e-07!6;UBERON:0007277!2.87e-07!6;UBERON:0003056!4.14e-07!49;UBERON:0003080!7.83e-07!40 | |ontology_enrichment_uberon=UBERON:0001017!3.51e-20!73;UBERON:0005743!3.51e-20!73;UBERON:0000073!1.77e-19!75;UBERON:0001016!1.77e-19!75;UBERON:0003076!2.27e-19!12;UBERON:0003057!2.27e-19!12;UBERON:0001049!5.65e-19!52;UBERON:0005068!5.65e-19!52;UBERON:0006241!5.65e-19!52;UBERON:0007135!5.65e-19!52;UBERON:0000955!1.01e-16!50;UBERON:0006238!1.01e-16!50;UBERON:0002346!1.07e-16!71;UBERON:0003075!1.07e-16!71;UBERON:0007284!1.07e-16!71;UBERON:0004121!2.36e-16!102;UBERON:0000924!2.36e-16!102;UBERON:0006601!2.36e-16!102;UBERON:0002616!3.29e-15!49;UBERON:0000033!3.93e-15!63;UBERON:0002240!2.82e-14!6;UBERON:0005174!2.82e-14!6;UBERON:0001137!2.82e-14!6;UBERON:0001948!5.26e-12!5;UBERON:0002315!5.26e-12!5;UBERON:0002020!2.97e-11!34;UBERON:0002298!1.20e-10!6;UBERON:0007811!1.05e-09!86;UBERON:0004684!2.80e-09!3;UBERON:0002275!2.80e-09!3;UBERON:0000153!1.90e-08!94;UBERON:0002257!7.99e-08!3;UBERON:0004733!2.87e-07!6;UBERON:0004732!2.87e-07!6;UBERON:0002028!2.87e-07!6;UBERON:0007277!2.87e-07!6;UBERON:0003056!4.14e-07!49;UBERON:0003080!7.83e-07!40 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.56e-25,3;UBERON:0002275,2.56e-25,3;UBERON:0000073,3.40e-14,54;UBERON:0001017,1.39e-12,73;UBERON:0001016,3.15e-12,75;UBERON:0000955,2.72e-10,47;UBERON:0006238,2.72e-10,47;UBERON:0002259,1.44e-09,1;UBERON:0002314,1.44e-09,1;UBERON:0004061,1.44e-09,1;UBERON:0006777,1.44e-09,1;UBERON:0005882,1.44e-09,1;UBERON:0004121,1.73e-09,95;UBERON:0000924,1.73e-09,95;UBERON:0006601,1.73e-09,95;UBERON:0002037,1.10e-08,4;UBERON:0002680,1.10e-08,4;UBERON:0001895,1.10e-08,4;UBERON:0010092,1.10e-08,4;UBERON:0006215,1.10e-08,4;UBERON:0002616,4.29e-08,46;UBERON:0001049,4.15e-07,52;UBERON:0005068,4.15e-07,52;UBERON:0006241,4.15e-07,52;UBERON:0007135,4.15e-07,52 | |||
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|short_description=p11@C1qtnf4 | |short_description=p11@C1qtnf4 | ||
}} | }} |
Latest revision as of 02:24, 27 September 2015
Short description: | p11@C1qtnf4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_C1qtnf4_5end |
Coexpression cluster: | MCL_coexpression_mm9:189 |
Association with transcript: | -326bp_to_ENSMUST00000036860, NM_026161, uc008ktq.1_5end |
EntrezGene: | C1qtnf4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.56e-25 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.56e-25 | 3 |
reticular formation | 2.56e-25 | 3 |
regional part of nervous system | 3.40e-14 | 54 |
central nervous system | 1.39e-12 | 73 |
nervous system | 3.15e-12 | 75 |
brain | 2.72e-10 | 47 |
future brain | 2.72e-10 | 47 |
corpora quadrigemina | 1.44e-09 | 1 |
midbrain tectum | 1.44e-09 | 1 |
neural tube mantle layer | 1.44e-09 | 1 |
tectal plate | 1.44e-09 | 1 |
neural tube alar plate | 1.44e-09 | 1 |
ectoderm-derived structure | 1.73e-09 | 95 |
ectoderm | 1.73e-09 | 95 |
presumptive ectoderm | 1.73e-09 | 95 |
cerebellum | 1.10e-08 | 4 |
regional part of metencephalon | 1.10e-08 | 4 |
metencephalon | 1.10e-08 | 4 |
future metencephalon | 1.10e-08 | 4 |
rhombic lip | 1.10e-08 | 4 |
regional part of brain | 4.29e-08 | 46 |
neural tube | 4.15e-07 | 52 |
neural rod | 4.15e-07 | 52 |
future spinal cord | 4.15e-07 | 52 |
neural keel | 4.15e-07 | 52 |