Personal tools

FFCP PHASE1:Mm9::chr2:68309935..68309968,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=53416
|EntrezGene=53416
|HGNC=
|HGNC=
|MCL_coexpression_id=3360
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=28bp_to_ENSMUST00000123781_5end
|association_with_transcript=28bp_to_ENSMUST00000123781_5end
|cluster_id=chr2:68309935..68309968,-
|description=CAGE_peak_3_at_Stk39_5end
|description=CAGE_peak_3_at_Stk39_5end
|id=chr2:68309935..68309968,-
|id=chr2:68309935..68309968,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007100!3.10e-11!18;UBERON:0000948!3.10e-11!18;UBERON:0005498!3.10e-11!18;UBERON:0004140!3.10e-11!18;UBERON:0009881!3.10e-11!18;UBERON:0004141!3.10e-11!18;UBERON:0003084!3.10e-11!18;UBERON:0007005!3.10e-11!18;UBERON:0004139!3.10e-11!18;UBERON:0004291!3.10e-11!18;UBERON:0003103!1.12e-10!43;UBERON:0002346!6.21e-10!71;UBERON:0003075!6.21e-10!71;UBERON:0007284!6.21e-10!71;UBERON:0000468!4.55e-08!333;UBERON:0000033!1.53e-07!63;UBERON:0004121!1.94e-07!102;UBERON:0000924!1.94e-07!102;UBERON:0006601!1.94e-07!102;UBERON:0004111!2.27e-07!122;UBERON:0004535!2.53e-07!23;UBERON:0001009!2.53e-07!23;UBERON:0000025!2.63e-07!114;UBERON:0001049!9.33e-07!52;UBERON:0005068!9.33e-07!52;UBERON:0006241!9.33e-07!52;UBERON:0007135!9.33e-07!52
|ontology_enrichment_uberon=UBERON:0007100!3.10e-11!18;UBERON:0000948!3.10e-11!18;UBERON:0005498!3.10e-11!18;UBERON:0004140!3.10e-11!18;UBERON:0009881!3.10e-11!18;UBERON:0004141!3.10e-11!18;UBERON:0003084!3.10e-11!18;UBERON:0007005!3.10e-11!18;UBERON:0004139!3.10e-11!18;UBERON:0004291!3.10e-11!18;UBERON:0003103!1.12e-10!43;UBERON:0002346!6.21e-10!71;UBERON:0003075!6.21e-10!71;UBERON:0007284!6.21e-10!71;UBERON:0000468!4.55e-08!333;UBERON:0000033!1.53e-07!63;UBERON:0004121!1.94e-07!102;UBERON:0000924!1.94e-07!102;UBERON:0006601!1.94e-07!102;UBERON:0004111!2.27e-07!122;UBERON:0004535!2.53e-07!23;UBERON:0001009!2.53e-07!23;UBERON:0000025!2.63e-07!114;UBERON:0001049!9.33e-07!52;UBERON:0005068!9.33e-07!52;UBERON:0006241!9.33e-07!52;UBERON:0007135!9.33e-07!52
|ontology_enrichment_uberon_v019_2=UBERON:0010314,3.90e-20,92;UBERON:0007100,6.00e-12,18;UBERON:0000948,6.00e-12,18;UBERON:0005498,6.00e-12,18;UBERON:0004140,6.00e-12,18;UBERON:0009881,6.00e-12,18;UBERON:0004141,6.00e-12,18;UBERON:0003084,6.00e-12,18;UBERON:0007005,6.00e-12,18;UBERON:0004139,6.00e-12,18;UBERON:0004291,6.00e-12,18;UBERON:0003103,3.33e-11,43;UBERON:0000025,3.43e-08,114;UBERON:0004111,3.68e-08,122;UBERON:0004535,1.45e-07,23;UBERON:0001009,1.45e-07,23;UBERON:0000073,1.79e-07,54;UBERON:0001049,7.78e-07,52;UBERON:0005068,7.78e-07,52;UBERON:0006241,7.78e-07,52;UBERON:0007135,7.78e-07,52;UBERON:0002346,7.85e-07,64;UBERON:0003075,7.85e-07,64;UBERON:0007284,7.85e-07,64
|phase1_expression=5.2849119544582,0.697950815278722,3.18499467572675,0.90739263392049,0,1.6787927191189,1.40167584357315,1.16210991097419,2.53419699873,3.7450324211519,0.171217968225505,0.957265907944037,0.856003649656029,0.262261207256992,0.999329285446988,0,0.699561878128147,0,0.137114433605739,0,2.38121212422995,0,0,1.27993938234725,0.91763712426868,0,3.01533397311352,0.430942465371778,0.190023419456374,0.252030129759931,1.10865255327652,0,0,0,0.577703239502549,0.997407872150954,1.22501613757421,0,0,0,0.588231488031014,0,0,0.629484089877886,0.405507724878058,0.183546752161682,0.782391344348039,0.65407546914134,0,0.58328969722285,1.39986421625363,0,0,0.725362142011344,0,2.31533492432352,2.0057340795713,3.09403255366465,1.41621522601718,2.11596391708813,1.90149421051854,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,1.53687322128622,0.207379224616955,0.135005938331691,0.630974884054146,3.71346279724945,6.62605622854841,0.244981598429908,0.766763768145891,0,3.30347642998166,4.21368215681119,3.22573719838111,1.05509030184155,1.55528994124096,2.08365348222704,3.07101298901519,3.37657566019008,2.90316670775939,6.48182888042069,4.6982654663704,2.98239113320481,1.59025005999687,0.377857800533928,0.579728977403356,0,0,0,0.649776417447669,0,0.842666520790511,0.681721290312231,0.259786004602869,0.35333957451034,18.7321748302985,0,0,0,0.649473123033642,0.760079596425296,0,1.48439043634778,0.776813650941515,9.05497048295431,9.36820764537134,9.13396434936424,6.91846491768175,8.13902258984162,11.9940481278419,4.14699751387929,0.247194967734374,1.3013942122792,0,1.94120219936891,1.10420759230197,1.93950101254089,0,2.34224637609238,5.44561437714983,0.766371165625774,0.11981512450592,0,0.127070227073065,3.14560342750128,1.37250180845588,1.13088916901578,4.86708096538374,5.37002460393694,4.36354893575076,2.92034273521964,1.32391173005411,5.47390670684409,16.9324248150562,1.68353484709179,1.82168620147785,1.14951052216736,2.34080768746954,0.90422890701429,2.31324097114515,2.562274405697,1.96773621575431,3.88055056108524,1.72454394346274,2.45837904218165,2.28736461413134,1.53437012699302,0.556094498451196,2.43776516565517,1.23469281844766,2.58744546864041,0,0,0,15.7415587126981,11.2572508790926,12.42428224081,14.678173606283,16.5281954667819,17.7407179820485,26.5088697015465,23.3397859217669,30.9428157272999,20.2408615393581,16.4167464079095,14.9977297659833,13.0117988808546,11.4166059951346,10.3338942445486,5.04695876553905,2.46971069710283,0.660837565967596,1.05780226665418,0.853153002140936,0.232236671860439,0.902072229254653,1.00841762311671,0.667134131534611,0.570676878337677,0.474529061544512,0.658795818896044,0.502670417600539,0.397912944082302,0.974820435595601,3.59527763461689,0.648414149624083,0.199141273254367,1.51734320762465,1.71372768914593,3.38123207019241,3.05476991767971,1.74557238450863,3.15611189506434,2.08680572510049,2.36176236767363,2.19798218977925,2.46794327843601,0.296452627087149,1.16791574001266,0.393117990226406,0.224862112384854,0,0,0.50925170356284,0.863088412352432,0.162135226775035,0,2.87536413054709,0.744281895337007,0.624075346229121,0,0,0.482443521363367,1.29327233116623,4.35830247072115,2.93336957595647,1.35796068620151,3.28566347603903,4.02015017860358,2.85652369063216,4.87834119644497,2.04925687338048,1.7717175171902,1.59454768657487,1.3109065177259,1.72684981865896,0.289298117163023,0,0,0,0.827810238914197,5.13761887960934,4.10240903072711,2.29508923527346,0.252470927204373,1.26203287766503,1.56175497718655,0.646270193198397,0.477937595905104,0.222798674082394,0,0.809621403349789,2.33804686329049,0.395287777946524,5.46246237917072,4.11626247103979,3.91744328067962,2.44330439030364,1.64970122972535,3.98235415019888,0.971122544619926,0.906970670894253,1.50884063804718,2.95301892880773,0.922305443831782,1.55056975900933,2.18120237686503,1.78248689192361,1.26414703174326,1.05418608574999,1.03135543248187,4.08527526904546,0.900305470156551,2.06973894052407,1.92903331528433,4.07882537377229,4.28085162244969,5.92376474167636,3.95804433848979,1.40803024838226,1.90648863777438,1.54369878638473,0.16488625294148,0.968786560175433,0.663442174209714,0.954978752025092,1.96969079694074,1.45740418314925,3.70850604021019,1.70870880797853,2.06386867963222,1.66675074632741,0.565105371014073,0.410082683163076,1.60144721244566,0,0,0.138199973804424,1.90934123603023,0.474503990371703,1.42323626988794,1.29606408986162,0.418176592028937,1.09181281873089,1.21377911746339,1.32245529160537,0.785267825952089,0.90730481304255,7.45607175704311,5.6369293868419,2.69129782879162,1.65458490457098,2.33341426012857,2.97067593998782,2.36538575687089,2.58185925020659,2.47388331203505,3.25063967719704,3.38217769156408,3.16833006883652,0.316011120628178,1.21635129174099,1.23253148597793,1.16928740680016,1.25318686967237,0,0.600977247599844,0.738447635872886,0.302899349844443,0.685861259894999,0.201652370273681,0.584747284438515,0.0962118416403295,0.116876902181569,0.453460767230423,0,0.179427713218951,0.503653849092235,0.772758376128762,2.25218970541418,0.915758121336325,0.643105137237198,0,3.95326289831947,5.52390283808612,2.86447756719698,1.3748254587495,6.85082519770642,5.2877572817279,2.02506750069542,4.95353323546643,8.60970577069989,4.14208249401456,2.07574695168353,1.99512436700516,1.19513524027894,0,1.25767897576789,1.2869045591501,0.888986911206461,1.85431551515005,0.962757628775446,1.51618327058278,1.52087579934144,2.45214243801899,1.31098110457835,1.79270426733634,1.83793500657962,2.38146845641537,1.39061191133827,0.578727661391115,0.824171801606613,2.20798380201596,1.71434626192708,1.95223386775271,1.43061713968393,1.45346416632329,1.69396884747595,1.52306294205018,2.74391959309159,1.8414879800649,1.35804113845862,3.92799590160417,1.54225523561426,1.57607171800902,1.63692417267876,2.32405261778949,1.54325288784913,2.74791635731741,1.63752125911786,2.14871054048298,2.67803664896381,2.64709702943419,3.01428186306548
|phase1_expression=5.2849119544582,0.697950815278722,3.18499467572675,0.90739263392049,0,1.6787927191189,1.40167584357315,1.16210991097419,2.53419699873,3.7450324211519,0.171217968225505,0.957265907944037,0.856003649656029,0.262261207256992,0.999329285446988,0,0.699561878128147,0,0.137114433605739,0,2.38121212422995,0,0,1.27993938234725,0.91763712426868,0,3.01533397311352,0.430942465371778,0.190023419456374,0.252030129759931,1.10865255327652,0,0,0,0.577703239502549,0.997407872150954,1.22501613757421,0,0,0,0.588231488031014,0,0,0.629484089877886,0.405507724878058,0.183546752161682,0.782391344348039,0.65407546914134,0,0.58328969722285,1.39986421625363,0,0,0.725362142011344,0,2.31533492432352,2.0057340795713,3.09403255366465,1.41621522601718,2.11596391708813,1.90149421051854,1.0165335962074,0.889294796111139,0,0,0,0.599200221036809,1.53687322128622,0.207379224616955,0.135005938331691,0.630974884054146,3.71346279724945,6.62605622854841,0.244981598429908,0.766763768145891,0,3.30347642998166,4.21368215681119,3.22573719838111,1.05509030184155,1.55528994124096,2.08365348222704,3.07101298901519,3.37657566019008,2.90316670775939,6.48182888042069,4.6982654663704,2.98239113320481,1.59025005999687,0.377857800533928,0.579728977403356,0,0,0,0.649776417447669,0,0.842666520790511,0.681721290312231,0.259786004602869,0.35333957451034,18.7321748302985,0,0,0,0.649473123033642,0.760079596425296,0,1.48439043634778,0.776813650941515,9.05497048295431,9.36820764537134,9.13396434936424,6.91846491768175,8.13902258984162,11.9940481278419,4.14699751387929,0.247194967734374,1.3013942122792,0,1.94120219936891,1.10420759230197,1.93950101254089,0,2.34224637609238,5.44561437714983,0.766371165625774,0.11981512450592,0,0.127070227073065,3.14560342750128,1.37250180845588,1.13088916901578,4.86708096538374,5.37002460393694,4.36354893575076,2.92034273521964,1.32391173005411,5.47390670684409,16.9324248150562,1.68353484709179,1.82168620147785,1.14951052216736,2.34080768746954,0.90422890701429,2.31324097114515,2.562274405697,1.96773621575431,3.88055056108524,1.72454394346274,2.45837904218165,2.28736461413134,1.53437012699302,0.556094498451196,2.43776516565517,1.23469281844766,2.58744546864041,0,0,0,15.7415587126981,11.2572508790926,12.42428224081,14.678173606283,16.5281954667819,17.7407179820485,26.5088697015465,23.3397859217669,30.9428157272999,20.2408615393581,16.4167464079095,14.9977297659833,13.0117988808546,11.4166059951346,10.3338942445486,5.04695876553905,2.46971069710283,0.660837565967596,1.05780226665418,0.853153002140936,0.232236671860439,0.902072229254653,1.00841762311671,0.667134131534611,0.570676878337677,0.474529061544512,0.658795818896044,0.502670417600539,0.397912944082302,0.974820435595601,3.59527763461689,0.648414149624083,0.199141273254367,1.51734320762465,1.71372768914593,3.38123207019241,3.05476991767971,1.74557238450863,3.15611189506434,2.08680572510049,2.36176236767363,2.19798218977925,2.46794327843601,0.296452627087149,1.16791574001266,0.393117990226406,0.224862112384854,0,0,0.50925170356284,0.863088412352432,0.162135226775035,0,2.87536413054709,0.744281895337007,0.624075346229121,0,0,0.482443521363367,1.29327233116623,4.35830247072115,2.93336957595647,1.35796068620151,3.28566347603903,4.02015017860358,2.85652369063216,4.87834119644497,2.04925687338048,1.7717175171902,1.59454768657487,1.3109065177259,1.72684981865896,0.289298117163023,0,0,0,0.827810238914197,5.13761887960934,4.10240903072711,2.29508923527346,0.252470927204373,1.26203287766503,1.56175497718655,0.646270193198397,0.477937595905104,0.222798674082394,0,0.809621403349789,2.33804686329049,0.395287777946524,5.46246237917072,4.11626247103979,3.91744328067962,2.44330439030364,1.64970122972535,3.98235415019888,0.971122544619926,0.906970670894253,1.50884063804718,2.95301892880773,0.922305443831782,1.55056975900933,2.18120237686503,1.78248689192361,1.26414703174326,1.05418608574999,1.03135543248187,4.08527526904546,0.900305470156551,2.06973894052407,1.92903331528433,4.07882537377229,4.28085162244969,5.92376474167636,3.95804433848979,1.40803024838226,1.90648863777438,1.54369878638473,0.16488625294148,0.968786560175433,0.663442174209714,0.954978752025092,1.96969079694074,1.45740418314925,3.70850604021019,1.70870880797853,2.06386867963222,1.66675074632741,0.565105371014073,0.410082683163076,1.60144721244566,0,0,0.138199973804424,1.90934123603023,0.474503990371703,1.42323626988794,1.29606408986162,0.418176592028937,1.09181281873089,1.21377911746339,1.32245529160537,0.785267825952089,0.90730481304255,7.45607175704311,5.6369293868419,2.69129782879162,1.65458490457098,2.33341426012857,2.97067593998782,2.36538575687089,2.58185925020659,2.47388331203505,3.25063967719704,3.38217769156408,3.16833006883652,0.316011120628178,1.21635129174099,1.23253148597793,1.16928740680016,1.25318686967237,0,0.600977247599844,0.738447635872886,0.302899349844443,0.685861259894999,0.201652370273681,0.584747284438515,0.0962118416403295,0.116876902181569,0.453460767230423,0,0.179427713218951,0.503653849092235,0.772758376128762,2.25218970541418,0.915758121336325,0.643105137237198,0,3.95326289831947,5.52390283808612,2.86447756719698,1.3748254587495,6.85082519770642,5.2877572817279,2.02506750069542,4.95353323546643,8.60970577069989,4.14208249401456,2.07574695168353,1.99512436700516,1.19513524027894,0,1.25767897576789,1.2869045591501,0.888986911206461,1.85431551515005,0.962757628775446,1.51618327058278,1.52087579934144,2.45214243801899,1.31098110457835,1.79270426733634,1.83793500657962,2.38146845641537,1.39061191133827,0.578727661391115,0.824171801606613,2.20798380201596,1.71434626192708,1.95223386775271,1.43061713968393,1.45346416632329,1.69396884747595,1.52306294205018,2.74391959309159,1.8414879800649,1.35804113845862,3.92799590160417,1.54225523561426,1.57607171800902,1.63692417267876,2.32405261778949,1.54325288784913,2.74791635731741,1.63752125911786,2.14871054048298,2.67803664896381,2.64709702943419,3.01428186306548
|short_description=p3@Stk39
|short_description=p3@Stk39
}}
}}

Latest revision as of 21:12, 26 September 2015

Short description:p3@Stk39
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Stk39_5end
Coexpression cluster:MCL_coexpression_mm9:3360
Association with transcript: 28bp_to_ENSMUST00000123781_5end
EntrezGene:Stk39
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Stk39

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.28
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I63.18
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.91
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I71.68
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.40
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E91.16
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E72.53
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.75
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.96
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.86
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.26
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.14
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D11.28
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.11
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.58
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F61.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.63
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.18
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C12.32
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E12.01
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C61.02
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.60
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.21
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D56.63
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.24
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.77
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F34.21
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.08
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E43.07
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I62.90
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.48
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F64.70
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D91.59
Mouse Schwann, donor2.CNhs12573.11746-123F90.38
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.84
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.68
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G618.73
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.76
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.48
accessory axillary lymph node, adult.CNhs10475.1063-29H90.78
adrenal gland, adult.CNhs10508.49-24D79.05
adrenal gland, embryo E14.CNhs11038.406-44C59.37
adrenal gland, embryo E16.CNhs11004.1254-43D69.13
adrenal gland, embryo E17.CNhs11043.1263-45I16.92
adrenal gland, embryo E18.CNhs11026.1262-18F58.14
adrenal gland, neonate N00.CNhs11191.1311-23C111.99
adrenal gland, neonate N25.CNhs11223.1377-27I34.15
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H11.30
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F51.94
bone (os femoris), neonate N16.CNhs11225.1525-43A61.10
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.34
cerebellum, neonate N30.CNhs11135.1395-42I25.45
colon, adult.CNhs10468.36-18H70.77
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A43.15
corpus striatum, adult.CNhs10487.19-21D81.37
corpus striatum, neonate N00.CNhs11226.630-43F11.13
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F25.37
diencephalon, adult.CNhs10482.20-12F24.36
diencephalon, neonate N30.CNhs11201.1388-42B22.92
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B11.32
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.47
epididymis, adult.CNhs10490.58-23B216.93
eyeball, adult.CNhs10484.31-12G41.68
eyeball, embryo E12.CNhs11016.345-16C61.82
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C92.34
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C62.31
eyeball, neonate N01.CNhs11140.1532-43E72.56
eyeball, neonate N02.CNhs11205.1551-44G81.97
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E21.72
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.29
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E70.56
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.23
gonad, embryo E13.CNhs11044.1564-45I62.59
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E915.74
heart, embryo E12.CNhs11015.353-12F511.26
heart, embryo E13.CNhs11013.376-3I912.42
heart, embryo E14.CNhs10597.403-26D414.68
heart, embryo E15.CNhs11017.431-16C816.53
heart, embryo E16.CNhs11021.457-17C617.74
heart, embryo E17.CNhs11025.479-18E526.51
heart, embryo E18.CNhs11030.1283-20G323.34
heart, neonate N00.CNhs11213.639-21E330.94
heart, neonate N03.CNhs11221.1349-25I220.24
heart, neonate N10.CNhs11118.749-24G116.42
heart, neonate N16.CNhs11209.782-15G115.00
heart, neonate N20.CNhs11127.821-26I613.01
heart, neonate N25.CNhs11196.1351-25D311.42
heart, neonate N30.CNhs11202.1390-42D210.33
hippocampus, adult.CNhs10478.13-16E85.05
hippocampus, neonate N00.CNhs11228.627-43G12.47
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A31.06
intestine, embryo E12.CNhs11019.1251-16I50.85
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.90
intestine, embryo E16.CNhs10585.463-22H41.01
intestine, embryo E17.CNhs10582.482-18D30.67
intestine, embryo E18.CNhs10526.1289-20F70.57
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.66
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D13.60
intestine, neonate N25.CNhs11121.1352-25E30.65
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I91.52
kidney, embryo E15.CNhs10997.434-16F81.71
kidney, embryo E16.CNhs10584.464-22A53.38
kidney, embryo E17.CNhs11028.483-18I23.05
kidney, embryo E18.CNhs11001.1288-20C71.75
kidney, neonate N00.CNhs11214.646-21G73.16
kidney, neonate N10.CNhs11206.758-6D52.09
kidney, neonate N20.CNhs11113.832-19I12.36
kidney, neonate N25.CNhs11122.1353-25F32.20
kidney, neonate N30.CNhs11203.1385-42H12.47
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.17
liver, embryo E13.CNhs10524.378-3H60.39
liver, embryo E14.CNhs10594.409-16E10.22
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.51
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.16
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A82.88
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.48
lung, adult.CNhs10474.28-22B11.29
lung, embryo E12.CNhs10522.354-16G24.36
lung, embryo E14.CNhs10604.404-26F82.93
lung, embryo E15.CNhs11020.432-17C51.36
lung, embryo E16.CNhs10998.458-17B63.29
lung, embryo E17.CNhs10605.480-44A64.02
lung, embryo E18.CNhs10583.1287-20I62.86
lung, neonate N00.CNhs11224.640-42C64.88
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A31.77
lung, neonate N10.CNhs11219.750-23E61.59
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.73
lung, neonate N30.CNhs11133.1394-42H20.29
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.83
medulla oblongata, adult.CNhs10477.17-12C25.14
medulla oblongata, neonate N30.CNhs11200.1396-42A34.10
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C72.30
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.81
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I95.46
ovary, adult.CNhs10507.91-2I74.12
ovary, embryo E18.CNhs11040.505-44H73.92
ovary, neonate N00.CNhs11217.1299-22I42.44
oviduct, adult pregnant day01.CNhs10500.988-6G61.65
pancreas, adult.CNhs10486.34-16E43.98
pancreas, embryo E14.CNhs11012.405-44F40.97
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.51
pancreas, embryo E17.CNhs10599.1558-45G32.95
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G91.55
pancreas, neonate N01.CNhs11138.1531-43D72.18
pancreas, neonate N02.CNhs11139.1539-43D81.78
pancreas, neonate N16.CNhs11136.787-43B61.26
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G84.09
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C72.07
pituitary gland, embryo E14.CNhs11037.398-44A51.93
pituitary gland, embryo E15.CNhs10592.427-16B94.08
pituitary gland, embryo E16.CNhs11036.449-43F64.28
pituitary gland, embryo E17.CNhs11039.1265-44F55.92
pituitary gland, neonate N00.CNhs11190.1308-22E93.96
placenta, adult pregnant day10.CNhs10472.539-13I71.41
placenta, adult pregnant day17.CNhs10464.577-18G31.91
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.97
skin, neonate N03.CNhs11215.662-22H30.66
skin, neonate N06.CNhs11097.693-20I50.95
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I11.46
spinal cord, adult.CNhs10505.24-13C93.71
spleen, adult.CNhs10465.25-2G21.71
spleen, embryo E16.CNhs11035.461-43C12.06
spleen, embryo E18.CNhs11011.1271-21F21.67
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.41
spleen, neonate N25.CNhs11099.1354-25G31.60
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E30.47
stomach, embryo E15.CNhs10603.1252-16G81.42
stomach, embryo E16.CNhs11022.459-17D41.30
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B81.21
stomach, neonate N07.CNhs11210.718-18A91.32
stomach, neonate N25.CNhs11104.1355-25E40.79
stomach, neonate N30.CNhs11134.1386-42I10.91
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F52.69
testis, embryo E15.CNhs11034.443-27C51.65
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I52.97
testis, embryo E18.CNhs11027.503-18G52.37
testis, neonate N00.CNhs11189.1300-22B72.58
testis, neonate N07.CNhs11222.726-26I42.47
testis, neonate N10.CNhs11204.763-44D93.25
testis, neonate N20.CNhs11110.839-18H33.38
testis, neonate N30.CNhs11130.1391-42E23.17
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I41.22
thymus, embryo E15.CNhs11005.430-45I21.23
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C70.74
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.69
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.58
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.45
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.18
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.50
urinary bladder, adult.CNhs10481.879-12E40.77
uterus, adult pregnant day19.CNhs10497.590-15F52.25
uterus, adult.CNhs10509.92-27E50.92
vagina, adult.CNhs10502.89-27D50.64
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A13.95
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A25.52
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A32.86
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.37
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.85
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A55.29
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.95
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A88.61
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A94.14
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H21.20
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B11.26
whole body, embryo E16.CNhs10514.453-14F21.29
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G51.85
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.79
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G51.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.21
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.71
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.95
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.69
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.74
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G53.93
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.54
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.58
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G51.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.32
whole body, embryo E17.5.CNhs10513.490-9F91.54
whole body, embryo E17.CNhs10517.475-3I52.75
whole body, embryo E18.CNhs10516.493-3B31.64
whole body, neonate N00.CNhs10525.657-19C22.15
whole body, neonate N01.CNhs10576.659-23C62.68
whole body, neonate N06.CNhs10515.692-21D12.65
whole body, neonate N10.CNhs10518.761-6B43.01





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:68309935..68309968,-&oldid=4274559"