FFCP PHASE1:Mm9::chr2:55288199..55288212,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16519 | |EntrezGene=16519 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=405 | |||
|TSSclassifier=NA | |||
|UniProt=P63250 | |UniProt=P63250 | ||
|association_with_transcript=-168bp_to_ENSMUST00000067101_5end | |association_with_transcript=-168bp_to_ENSMUST00000067101_5end | ||
|cluster_id=chr2:55288199..55288212,+ | |||
|description=CAGE_peak_4_at_Kcnj3_5end | |description=CAGE_peak_4_at_Kcnj3_5end | ||
|id=chr2:55288199..55288212,+ | |id=chr2:55288199..55288212,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.73e-13!33;CL:0000047!1.73e-13!33;CL:0000031!1.73e-13!33;CL:0000404!1.73e-13!33;CL:0000117!3.41e-12!23;CL:0000337!3.41e-12!23;CL:0000393!1.00e-10!39;CL:0000211!1.00e-10!39;CL:0000221!7.35e-08!44;CL:0000133!7.35e-08!44;CL:0002319!1.04e-07!43 | |ontology_enrichment_celltype=CL:0000540!1.73e-13!33;CL:0000047!1.73e-13!33;CL:0000031!1.73e-13!33;CL:0000404!1.73e-13!33;CL:0000117!3.41e-12!23;CL:0000337!3.41e-12!23;CL:0000393!1.00e-10!39;CL:0000211!1.00e-10!39;CL:0000221!7.35e-08!44;CL:0000133!7.35e-08!44;CL:0002319!1.04e-07!43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000540,2.17e-13,33;CL:0000047,2.17e-13,33;CL:0000031,2.17e-13,33;CL:0000404,2.17e-13,33;CL:0000393,8.98e-12,39;CL:0000211,8.98e-12,39;CL:0000117,4.99e-11,23;CL:0000337,4.99e-11,23;CL:0002319,5.39e-09,43;CL:0000221,1.14e-08,44;CL:0000133,1.14e-08,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.84e-19!73;UBERON:0005743!1.84e-19!73;UBERON:0000073!2.53e-18!75;UBERON:0001016!2.53e-18!75;UBERON:0002020!3.49e-17!34;UBERON:0001049!2.95e-15!52;UBERON:0005068!2.95e-15!52;UBERON:0006241!2.95e-15!52;UBERON:0007135!2.95e-15!52;UBERON:0000955!8.60e-15!50;UBERON:0006238!8.60e-15!50;UBERON:0002791!1.67e-14!29;UBERON:0003528!1.67e-14!29;UBERON:0001893!1.67e-14!29;UBERON:0002616!4.72e-14!49;UBERON:0000033!7.58e-14!63;UBERON:0004121!1.00e-13!102;UBERON:0000924!1.00e-13!102;UBERON:0006601!1.00e-13!102;UBERON:0002346!3.39e-12!71;UBERON:0003075!3.39e-12!71;UBERON:0007284!3.39e-12!71;UBERON:0000025!1.32e-11!114;UBERON:0003080!2.25e-11!40;UBERON:0003056!3.36e-11!49;UBERON:0000956!5.09e-11!21;UBERON:0001869!5.09e-11!21;UBERON:0000203!5.09e-11!21;UBERON:0002780!8.18e-11!39;UBERON:0001890!8.18e-11!39;UBERON:0006240!8.18e-11!39;UBERON:0004111!1.31e-10!122;UBERON:0002021!2.23e-09!10;UBERON:0000411!2.23e-09!10;UBERON:0001950!2.23e-09!10;UBERON:0007100!3.61e-09!18;UBERON:0000948!3.61e-09!18;UBERON:0005498!3.61e-09!18;UBERON:0004140!3.61e-09!18;UBERON:0009881!3.61e-09!18;UBERON:0004141!3.61e-09!18;UBERON:0003084!3.61e-09!18;UBERON:0007005!3.61e-09!18;UBERON:0004139!3.61e-09!18;UBERON:0004291!3.61e-09!18;UBERON:0002619!3.70e-09!17;UBERON:0007811!2.21e-08!86;UBERON:0000153!2.06e-07!94 | |ontology_enrichment_uberon=UBERON:0001017!1.84e-19!73;UBERON:0005743!1.84e-19!73;UBERON:0000073!2.53e-18!75;UBERON:0001016!2.53e-18!75;UBERON:0002020!3.49e-17!34;UBERON:0001049!2.95e-15!52;UBERON:0005068!2.95e-15!52;UBERON:0006241!2.95e-15!52;UBERON:0007135!2.95e-15!52;UBERON:0000955!8.60e-15!50;UBERON:0006238!8.60e-15!50;UBERON:0002791!1.67e-14!29;UBERON:0003528!1.67e-14!29;UBERON:0001893!1.67e-14!29;UBERON:0002616!4.72e-14!49;UBERON:0000033!7.58e-14!63;UBERON:0004121!1.00e-13!102;UBERON:0000924!1.00e-13!102;UBERON:0006601!1.00e-13!102;UBERON:0002346!3.39e-12!71;UBERON:0003075!3.39e-12!71;UBERON:0007284!3.39e-12!71;UBERON:0000025!1.32e-11!114;UBERON:0003080!2.25e-11!40;UBERON:0003056!3.36e-11!49;UBERON:0000956!5.09e-11!21;UBERON:0001869!5.09e-11!21;UBERON:0000203!5.09e-11!21;UBERON:0002780!8.18e-11!39;UBERON:0001890!8.18e-11!39;UBERON:0006240!8.18e-11!39;UBERON:0004111!1.31e-10!122;UBERON:0002021!2.23e-09!10;UBERON:0000411!2.23e-09!10;UBERON:0001950!2.23e-09!10;UBERON:0007100!3.61e-09!18;UBERON:0000948!3.61e-09!18;UBERON:0005498!3.61e-09!18;UBERON:0004140!3.61e-09!18;UBERON:0009881!3.61e-09!18;UBERON:0004141!3.61e-09!18;UBERON:0003084!3.61e-09!18;UBERON:0007005!3.61e-09!18;UBERON:0004139!3.61e-09!18;UBERON:0004291!3.61e-09!18;UBERON:0002619!3.70e-09!17;UBERON:0007811!2.21e-08!86;UBERON:0000153!2.06e-07!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,5.34e-29,73;UBERON:0001016,6.74e-28,75;UBERON:0000073,7.00e-23,54;UBERON:0010314,7.42e-22,92;UBERON:0001049,1.62e-20,52;UBERON:0005068,1.62e-20,52;UBERON:0006241,1.62e-20,52;UBERON:0007135,1.62e-20,52;UBERON:0004121,1.85e-19,95;UBERON:0000924,1.85e-19,95;UBERON:0006601,1.85e-19,95;UBERON:0002020,2.41e-19,34;UBERON:0000955,7.59e-18,47;UBERON:0006238,7.59e-18,47;UBERON:0002616,1.19e-16,46;UBERON:0003528,2.61e-16,29;UBERON:0002791,2.61e-16,29;UBERON:0001893,2.61e-16,29;UBERON:0000025,3.66e-16,114;UBERON:0002021,5.56e-16,10;UBERON:0000411,5.56e-16,10;UBERON:0001950,5.56e-16,10;UBERON:0002346,5.63e-15,64;UBERON:0003075,5.63e-15,64;UBERON:0007284,5.63e-15,64;UBERON:0004111,2.68e-14,122;UBERON:0003080,2.70e-14,40;UBERON:0000956,5.95e-14,21;UBERON:0001869,5.95e-14,21;UBERON:0000203,5.95e-14,21;UBERON:0002780,2.25e-13,39;UBERON:0001890,2.25e-13,39;UBERON:0006240,2.25e-13,39;UBERON:0010371,4.72e-12,73;UBERON:0002619,4.88e-12,17;UBERON:0007100,8.52e-12,18;UBERON:0000948,8.52e-12,18;UBERON:0005498,8.52e-12,18;UBERON:0004140,8.52e-12,18;UBERON:0009881,8.52e-12,18;UBERON:0004141,8.52e-12,18;UBERON:0003084,8.52e-12,18;UBERON:0007005,8.52e-12,18;UBERON:0004139,8.52e-12,18;UBERON:0004291,8.52e-12,18;UBERON:0003056,1.76e-10,49;UBERON:0004535,1.74e-08,23;UBERON:0001009,1.74e-08,23;UBERON:0003076,4.49e-07,12;UBERON:0003057,4.49e-07,12 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09403255366465,2.02316460859598,4.7609188134483,1.90149421051854,0,0,0,0.988866362566974,0,0,0,0.622137673850866,1.21505344498522,1.26194976810829,1.14260393761521,1.76694832761291,0.734944795289724,0.287536413054709,0.919218786610021,3.30347642998166,3.31987079021488,2.76491759861238,0.659431438650969,0.548925861614458,2.08365348222704,1.67509799400829,2.25105044012672,1.98637722109853,3.24091444021034,2.13557521198654,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,1.46390398505774,2.51336048176146,0,0,0,0,2.69623150928681,2.28750301409313,0.376963056338593,3.82413504423008,3.58001640262463,3.1168206683934,2.92034273521964,0,0,0,0,0.520481771850815,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0,0.219195732427575,0,0,0.205782136407943,0.398068533636986,0,0,0,1.86413195281952,0.938104239924385,1.62055855314913,0.473489471170421,1.57411385397923,3.23960937063494,0.930135779001631,3.48755421819505,2.6856028744449,4.44311594766397,6.07419617092652,8.10688095458557,11.2573990317506,11.6361561104257,15.8363574137239,7.78072809687271,2.36680608472354,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.664394068946325,0.318909537314974,0.327726629431476,1.20879487306127,0.867894351489069,0,0,0,0,1.44495530989013,2.34423373184406,0,0,0.315508219416257,0,0,3.34556317133573,6.46116154838943,8.20921939287614,0.404810701674894,2.92255857911312,3.95287777946523,8.35435422696698,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0.241251699712623,0,0,0,1.48340241608408,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0.436725127492355,0,0,0,0,0,0,1.94371509857172,1.98550188548517,0.388902376688095,1.16243841129958,0.506868376472335,0.352071715937262,0.2604087696879,0,0,0,0.316011120628178,0,0,0.389762468933385,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,12.9892923801925,5.52390283808612,10.8850147553485,6.53042092906013,6.85082519770642,12.0863023582352,5.40018000185445,3.60256962579376,4.53142408984205,7.7664046762773,0,0,0.512200817262403,0.729320151204882,0.628839487883947,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,1.26348605881899,1.01391719956096,0.377252682772152,0.280924522409647,0.320125762024346,0.17230640686684,0,0.347652977834566,0.578727661391115,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0,0.726732083161643,0.470546902076653,0.592302255241736,0.365855945745545,0.263069711437843,0.814824683075171,0,0.593175090620871,0.394017929502254,0.818462086339379,0,0.385813221962283,0,0.935726433781634,0.644613162144895,0.191288332068843,0.220591419119515,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27564935226605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.09403255366465,2.02316460859598,4.7609188134483,1.90149421051854,0,0,0,0.988866362566974,0,0,0,0.622137673850866,1.21505344498522,1.26194976810829,1.14260393761521,1.76694832761291,0.734944795289724,0.287536413054709,0.919218786610021,3.30347642998166,3.31987079021488,2.76491759861238,0.659431438650969,0.548925861614458,2.08365348222704,1.67509799400829,2.25105044012672,1.98637722109853,3.24091444021034,2.13557521198654,0.931997229126503,0,0,0,0,0,0,0,0,0,0,0,0,0.281686839553361,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0,0,0.304465478312141,0.230615497256059,0,0,0,0,0,0,0,0,0,0,1.46390398505774,2.51336048176146,0,0,0,0,2.69623150928681,2.28750301409313,0.376963056338593,3.82413504423008,3.58001640262463,3.1168206683934,2.92034273521964,0,0,0,0,0.520481771850815,0,0.180062129805349,0.150704817835715,0.136072998302656,0.12811372028485,0.281105173679186,0.776110112217047,0,0,0,0.219195732427575,0,0,0.205782136407943,0.398068533636986,0,0,0,1.86413195281952,0.938104239924385,1.62055855314913,0.473489471170421,1.57411385397923,3.23960937063494,0.930135779001631,3.48755421819505,2.6856028744449,4.44311594766397,6.07419617092652,8.10688095458557,11.2573990317506,11.6361561104257,15.8363574137239,7.78072809687271,2.36680608472354,0,0,0,0.232236671860439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.739012760666419,0.37898282354097,0,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0.157635144106191,0.664394068946325,0.318909537314974,0.327726629431476,1.20879487306127,0.867894351489069,0,0,0,0,1.44495530989013,2.34423373184406,0,0,0.315508219416257,0,0,3.34556317133573,6.46116154838943,8.20921939287614,0.404810701674894,2.92255857911312,3.95287777946523,8.35435422696698,0.567760340833074,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0.241251699712623,0,0,0,1.48340241608408,0,0,0,0,0.136694227721025,0,0,0,0,0,0.158167996790568,0,0,0,0.436725127492355,0,0,0,0,0,0,1.94371509857172,1.98550188548517,0.388902376688095,1.16243841129958,0.506868376472335,0.352071715937262,0.2604087696879,0,0,0,0.316011120628178,0,0,0.389762468933385,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0.0962118416403295,0.116876902181569,0.226730383615211,0,0,0,0.19318959403219,0,0,0,0,12.9892923801925,5.52390283808612,10.8850147553485,6.53042092906013,6.85082519770642,12.0863023582352,5.40018000185445,3.60256962579376,4.53142408984205,7.7664046762773,0,0,0.512200817262403,0.729320151204882,0.628839487883947,0.551530525350042,0.666740183404846,0.412070114477788,0.64183841918363,1.26348605881899,1.01391719956096,0.377252682772152,0.280924522409647,0.320125762024346,0.17230640686684,0,0.347652977834566,0.578727661391115,0.412085900803307,0.147198920134397,0.685738504770831,0.177475806159338,0,0.726732083161643,0.470546902076653,0.592302255241736,0.365855945745545,0.263069711437843,0.814824683075171,0,0.593175090620871,0.394017929502254,0.818462086339379,0,0.385813221962283,0,0.935726433781634,0.644613162144895,0.191288332068843,0.220591419119515,0.695603506861264 | ||
|short_description=p4@Kcnj3 | |short_description=p4@Kcnj3 | ||
}} | }} |
Latest revision as of 18:51, 26 September 2015
Short description: | p4@Kcnj3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Kcnj3_5end |
Coexpression cluster: | MCL_coexpression_mm9:405 |
Association with transcript: | -168bp_to_ENSMUST00000067101_5end |
EntrezGene: | Kcnj3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 2.17e-13 | 33 |
neuronal stem cell | 2.17e-13 | 33 |
neuroblast | 2.17e-13 | 33 |
electrically signaling cell | 2.17e-13 | 33 |
electrically responsive cell | 8.98e-12 | 39 |
electrically active cell | 8.98e-12 | 39 |
CNS neuron (sensu Vertebrata) | 4.99e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.99e-11 | 23 |
neural cell | 5.39e-09 | 43 |
ectodermal cell | 1.14e-08 | 44 |
neurectodermal cell | 1.14e-08 | 44 |