FFCP PHASE1:Mm9::chr2:35316767..35316791,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14594 | |EntrezGene=14594 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q8C2H7,P23336 | |UniProt=Q8C2H7,P23336 | ||
|association_with_transcript=0bp_to_ENSMUST00000113001,ENSMUST00000113002_5end | |association_with_transcript=0bp_to_ENSMUST00000113001,ENSMUST00000113002_5end | ||
|cluster_id=chr2:35316767..35316791,- | |||
|description=CAGE_peak_1_at_Ggta1_5end | |description=CAGE_peak_1_at_Ggta1_5end | ||
|id=chr2:35316767..35316791,- | |id=chr2:35316767..35316791,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.71e-16!88;UBERON:0004872!1.92e-10!33;UBERON:0000926!1.16e-08!193;UBERON:0004120!1.16e-08!193;UBERON:0006603!1.16e-08!193;UBERON:0004535!2.60e-08!23;UBERON:0001009!2.60e-08!23;UBERON:0002204!6.37e-08!32;UBERON:0002193!1.52e-07!48;UBERON:0002390!2.51e-07!45;UBERON:0003061!2.51e-07!45;UBERON:0007100!2.51e-07!18;UBERON:0000948!2.51e-07!18;UBERON:0005498!2.51e-07!18;UBERON:0004140!2.51e-07!18;UBERON:0009881!2.51e-07!18;UBERON:0004141!2.51e-07!18;UBERON:0003084!2.51e-07!18;UBERON:0007005!2.51e-07!18;UBERON:0004139!2.51e-07!18;UBERON:0004291!2.51e-07!18 | |ontology_enrichment_uberon=UBERON:0003081!3.71e-16!88;UBERON:0004872!1.92e-10!33;UBERON:0000926!1.16e-08!193;UBERON:0004120!1.16e-08!193;UBERON:0006603!1.16e-08!193;UBERON:0004535!2.60e-08!23;UBERON:0001009!2.60e-08!23;UBERON:0002204!6.37e-08!32;UBERON:0002193!1.52e-07!48;UBERON:0002390!2.51e-07!45;UBERON:0003061!2.51e-07!45;UBERON:0007100!2.51e-07!18;UBERON:0000948!2.51e-07!18;UBERON:0005498!2.51e-07!18;UBERON:0004140!2.51e-07!18;UBERON:0009881!2.51e-07!18;UBERON:0004141!2.51e-07!18;UBERON:0003084!2.51e-07!18;UBERON:0007005!2.51e-07!18;UBERON:0004139!2.51e-07!18;UBERON:0004291!2.51e-07!18 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,4.02e-16,87;UBERON:0000926,1.20e-11,120;UBERON:0004120,1.20e-11,120;UBERON:0006603,1.20e-11,120;UBERON:0004872,1.11e-10,33;UBERON:0004535,1.72e-08,23;UBERON:0001009,1.72e-08,23;UBERON:0002193,4.65e-08,48;UBERON:0002405,4.65e-08,48;UBERON:0002204,4.96e-08,32;UBERON:0002390,7.69e-08,45;UBERON:0003061,7.69e-08,45;UBERON:0007100,1.76e-07,18;UBERON:0000948,1.76e-07,18;UBERON:0005498,1.76e-07,18;UBERON:0004140,1.76e-07,18;UBERON:0009881,1.76e-07,18;UBERON:0004141,1.76e-07,18;UBERON:0003084,1.76e-07,18;UBERON:0007005,1.76e-07,18;UBERON:0004139,1.76e-07,18;UBERON:0004291,1.76e-07,18 | |||
|phase1_expression=3.52327463630547,0,0,0,0,0,0,12.2667157269497,4.646027831005,3.97909694747389,0.171217968225505,0.319088635981346,2.9104124088305,1.92324885321794,2.99798785634096,2.83465374345756,3.49780939064073,5.99378114180652,9.32378148519024,6.36584477697045,1.61582251287033,30.9787767746762,21.6795824985316,1.91990907352088,2.98232065387321,0,0.86152399231815,0,0.380046838912748,0,0.665191531965914,0,0,0,0,0,0,27.204555997899,14.8453715459522,30.8879008944541,23.5292595212406,31.4200923080885,39.3263385955234,14.8558245211181,10.5432008468295,6.42413632565885,0.782391344348039,3.48840250208714,17.5748946187577,10.8880743481599,4.33957907038624,4.31257693094915,11.7447824240415,2.17608642603403,7.05796978199174,4.88792928468299,11.1748041576115,15.4701627683233,0,0.528990979272033,0,2.71075625655306,0.889294796111139,11.2487464660175,13.8441290759376,7.104801149461,3.89480143673926,4.2264013585371,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.153606533256243,0.263772575460388,0.0914876436024097,0,0,0,0.45839474333043,0.294628585473668,0.711858403995515,0.372798891650601,0.681535739998656,1.66257432234928,2.6087803983151,2.58127163094416,0,0.539703191637817,0,0,1.54488862144927,0.340860645156116,0.779358013808606,0,0.422530259330042,0,0,0,1.5154372870785,0.760079596425296,2.02209778005913,1.48439043634778,13.7237078333001,1.63286352971307,0.867426633830679,1.21786191324856,1.84492397804847,1.50722640552623,2.11659672844269,0.628332956648377,12.8541383221874,4.04878199375753,2.65383165584962,1.61766849947409,3.5334642953663,5.33362778448744,0,0,0.209446706813455,3.0654846625031,18.5713442984176,8.99854096490112,15.3754974758408,0.149790639404823,0.457500602818626,0.251308704225729,0.347648640384553,0.767146371990992,0.20778804455956,0.162241263067758,3.86989582631202,3.98102305952298,7.32895999457657,8.41767423545896,0.650602214813519,0,0.720248519221397,2.10986744970001,1.7009124787832,1.15302348256365,0.843315521037559,2.84573707812917,0.215567992932842,0.756424320671277,0.703804496655795,3.5071317188412,3.61461423993277,6.96504333044333,11.7295817752528,1.39323986772945,7.72434506044558,6.69104558498259,12.7873574728017,10.7705401718461,12.8989332989603,7.74266864282364,8.99629995223799,9.05115466038058,7.71335564436891,6.0458825635106,7.77992864058896,6.42209383019432,5.10135534731789,8.53670813211295,7.21512404958116,5.99419948443863,7.24515380460467,7.38135303182045,0.210289948564127,0.411618449517138,2.31293148088659,0.264450566663544,1.70630600428187,0.696710015581316,1.15980715189884,2.42020229548011,1.55664630691409,0.951128130562796,1.42358718463353,1.64698954724011,1.75934646160189,1.1937388322469,1.9496408711912,1.79763881730844,1.29682829924817,1.7922714592893,2.27601481143698,2.39921876480431,3.38123207019241,1.62921062276251,3.68509725618489,1.82353131714828,2.15004226222475,0.738050739898011,0.784993639206874,0.740382983530803,0.592905254174298,7.17433954579204,4.32429789249047,6.97072548393047,4.05720242777006,6.51178331331525,6.3656462945355,2.87696137450811,5.5125977103512,5.49122826376163,5.75072826109418,1.11642284300551,0.936113019343682,0.757736633841335,0.179397413521912,0,6.65111484599777,1.51593129416388,1.14075483509418,1.69745085775188,2.34690248288502,2.34508760418542,1.90434912708811,4.68320754858717,3.31033802623001,4.4292937929755,2.87018583583477,4.26044618260919,4.31712454664739,8.96824163205372,16.5870412333199,10.3342079925555,1.96705709207614,3.31124095565679,0.642202359951168,0.117211686592203,3.27869890753351,3.28212205365685,3.78609863299508,4.29482618726302,6.24727853425117,6.93009514062401,5.12436950389506,3.39691836946599,2.42886421004937,5.26060544240361,4.34816555741176,0.642642632843614,3.40656204499845,1.24645922567079,3.74640006513225,12.0428189769951,0,1.69946445308487,0.604647113929502,3.58349651536206,2.65771703592696,2.15204603560749,3.6179961043551,2.90826983582004,3.92147116223193,1.26414703174326,1.05418608574999,3.09406629744561,1.02131881726136,0.900305470156551,0.517434735131018,0,0.886701168211368,0.713475270408282,1.31639216481697,2.13125464380219,46.6996699046784,42.366414172764,1.54369878638473,20.610781617685,10.9795810153216,9.77069383836125,9.31104283224465,10.1767357841938,1.45740418314925,0.927126510052548,4.78438466233988,5.36605856704379,7.22258656741876,5.27431679613135,4.64760374251486,3.20289442489132,20.0574547392749,20.9927178485487,17.1367967517486,0.954670618015114,0.632671987162271,2.03319467126849,1.83609079397062,1.67270636811575,1.52853794622324,2.42755823492677,1.90102948168273,3.40282724579238,2.85152941241944,1.86401793926078,0,1.19613236835183,1.15820943319968,0.583353565032143,0.904118764344118,1.35164900392623,1.40828686374905,1.0416350787516,0.104859344425711,0.241584120826006,1.44015003128933,4.4241556887945,7.50083296573608,9.34669710199928,9.09445760844565,7.6981479137017,9.93406773906325,7.45211787023807,9.15675068482379,12.317906893674,11.58343461156,8.87270429204197,8.38137774361871,9.23633679747163,12.1551978268832,7.25537227568676,19.5347638969177,24.4021689977774,16.1169231709515,3.28422309854724,10.5102186252662,2.93042598827624,11.1471557121114,1.00314420807073,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0.31136204275253,1.99512436700516,1.19513524027894,2.91728060481953,1.88651846365184,1.10306105070008,4.4449345560323,2.47242068686673,1.92551525755089,2.27427490587418,3.8021894983536,3.58390048633545,3.27745276144588,3.64943368707755,4.53740204749345,4.28664322154766,3.82418275618023,3.6652751888104,2.47251540481984,5.5935589651071,2.74295401908332,4.79184676630211,4.29185141905178,5.0871245821315,4.70546902076653,4.23073039458383,2.56099162021882,3.6829759601298,5.16055632614275,3.36685362994643,2.60997039873183,3.44765688314472,1.22769312950907,4.64810523557898,3.08650577569826,3.74715866906919,4.44470056046276,4.29742108096597,3.06061331310149,5.7353768971074,4.86922454802885 | |phase1_expression=3.52327463630547,0,0,0,0,0,0,12.2667157269497,4.646027831005,3.97909694747389,0.171217968225505,0.319088635981346,2.9104124088305,1.92324885321794,2.99798785634096,2.83465374345756,3.49780939064073,5.99378114180652,9.32378148519024,6.36584477697045,1.61582251287033,30.9787767746762,21.6795824985316,1.91990907352088,2.98232065387321,0,0.86152399231815,0,0.380046838912748,0,0.665191531965914,0,0,0,0,0,0,27.204555997899,14.8453715459522,30.8879008944541,23.5292595212406,31.4200923080885,39.3263385955234,14.8558245211181,10.5432008468295,6.42413632565885,0.782391344348039,3.48840250208714,17.5748946187577,10.8880743481599,4.33957907038624,4.31257693094915,11.7447824240415,2.17608642603403,7.05796978199174,4.88792928468299,11.1748041576115,15.4701627683233,0,0.528990979272033,0,2.71075625655306,0.889294796111139,11.2487464660175,13.8441290759376,7.104801149461,3.89480143673926,4.2264013585371,0.103689612308478,0.135005938331691,0,0,0.441737081903227,0.244981598429908,0.0958454710182364,0,1.10115880999389,0.255374676170375,0.153606533256243,0.263772575460388,0.0914876436024097,0,0,0,0.45839474333043,0.294628585473668,0.711858403995515,0.372798891650601,0.681535739998656,1.66257432234928,2.6087803983151,2.58127163094416,0,0.539703191637817,0,0,1.54488862144927,0.340860645156116,0.779358013808606,0,0.422530259330042,0,0,0,1.5154372870785,0.760079596425296,2.02209778005913,1.48439043634778,13.7237078333001,1.63286352971307,0.867426633830679,1.21786191324856,1.84492397804847,1.50722640552623,2.11659672844269,0.628332956648377,12.8541383221874,4.04878199375753,2.65383165584962,1.61766849947409,3.5334642953663,5.33362778448744,0,0,0.209446706813455,3.0654846625031,18.5713442984176,8.99854096490112,15.3754974758408,0.149790639404823,0.457500602818626,0.251308704225729,0.347648640384553,0.767146371990992,0.20778804455956,0.162241263067758,3.86989582631202,3.98102305952298,7.32895999457657,8.41767423545896,0.650602214813519,0,0.720248519221397,2.10986744970001,1.7009124787832,1.15302348256365,0.843315521037559,2.84573707812917,0.215567992932842,0.756424320671277,0.703804496655795,3.5071317188412,3.61461423993277,6.96504333044333,11.7295817752528,1.39323986772945,7.72434506044558,6.69104558498259,12.7873574728017,10.7705401718461,12.8989332989603,7.74266864282364,8.99629995223799,9.05115466038058,7.71335564436891,6.0458825635106,7.77992864058896,6.42209383019432,5.10135534731789,8.53670813211295,7.21512404958116,5.99419948443863,7.24515380460467,7.38135303182045,0.210289948564127,0.411618449517138,2.31293148088659,0.264450566663544,1.70630600428187,0.696710015581316,1.15980715189884,2.42020229548011,1.55664630691409,0.951128130562796,1.42358718463353,1.64698954724011,1.75934646160189,1.1937388322469,1.9496408711912,1.79763881730844,1.29682829924817,1.7922714592893,2.27601481143698,2.39921876480431,3.38123207019241,1.62921062276251,3.68509725618489,1.82353131714828,2.15004226222475,0.738050739898011,0.784993639206874,0.740382983530803,0.592905254174298,7.17433954579204,4.32429789249047,6.97072548393047,4.05720242777006,6.51178331331525,6.3656462945355,2.87696137450811,5.5125977103512,5.49122826376163,5.75072826109418,1.11642284300551,0.936113019343682,0.757736633841335,0.179397413521912,0,6.65111484599777,1.51593129416388,1.14075483509418,1.69745085775188,2.34690248288502,2.34508760418542,1.90434912708811,4.68320754858717,3.31033802623001,4.4292937929755,2.87018583583477,4.26044618260919,4.31712454664739,8.96824163205372,16.5870412333199,10.3342079925555,1.96705709207614,3.31124095565679,0.642202359951168,0.117211686592203,3.27869890753351,3.28212205365685,3.78609863299508,4.29482618726302,6.24727853425117,6.93009514062401,5.12436950389506,3.39691836946599,2.42886421004937,5.26060544240361,4.34816555741176,0.642642632843614,3.40656204499845,1.24645922567079,3.74640006513225,12.0428189769951,0,1.69946445308487,0.604647113929502,3.58349651536206,2.65771703592696,2.15204603560749,3.6179961043551,2.90826983582004,3.92147116223193,1.26414703174326,1.05418608574999,3.09406629744561,1.02131881726136,0.900305470156551,0.517434735131018,0,0.886701168211368,0.713475270408282,1.31639216481697,2.13125464380219,46.6996699046784,42.366414172764,1.54369878638473,20.610781617685,10.9795810153216,9.77069383836125,9.31104283224465,10.1767357841938,1.45740418314925,0.927126510052548,4.78438466233988,5.36605856704379,7.22258656741876,5.27431679613135,4.64760374251486,3.20289442489132,20.0574547392749,20.9927178485487,17.1367967517486,0.954670618015114,0.632671987162271,2.03319467126849,1.83609079397062,1.67270636811575,1.52853794622324,2.42755823492677,1.90102948168273,3.40282724579238,2.85152941241944,1.86401793926078,0,1.19613236835183,1.15820943319968,0.583353565032143,0.904118764344118,1.35164900392623,1.40828686374905,1.0416350787516,0.104859344425711,0.241584120826006,1.44015003128933,4.4241556887945,7.50083296573608,9.34669710199928,9.09445760844565,7.6981479137017,9.93406773906325,7.45211787023807,9.15675068482379,12.317906893674,11.58343461156,8.87270429204197,8.38137774361871,9.23633679747163,12.1551978268832,7.25537227568676,19.5347638969177,24.4021689977774,16.1169231709515,3.28422309854724,10.5102186252662,2.93042598827624,11.1471557121114,1.00314420807073,0,0.460325236507177,0,0.343706364687375,0,0,0,0,0,0.51776031175182,0.31136204275253,1.99512436700516,1.19513524027894,2.91728060481953,1.88651846365184,1.10306105070008,4.4449345560323,2.47242068686673,1.92551525755089,2.27427490587418,3.8021894983536,3.58390048633545,3.27745276144588,3.64943368707755,4.53740204749345,4.28664322154766,3.82418275618023,3.6652751888104,2.47251540481984,5.5935589651071,2.74295401908332,4.79184676630211,4.29185141905178,5.0871245821315,4.70546902076653,4.23073039458383,2.56099162021882,3.6829759601298,5.16055632614275,3.36685362994643,2.60997039873183,3.44765688314472,1.22769312950907,4.64810523557898,3.08650577569826,3.74715866906919,4.44470056046276,4.29742108096597,3.06061331310149,5.7353768971074,4.86922454802885 | ||
|short_description=p1@Ggta1 | |short_description=p1@Ggta1 | ||
}} | }} |
Latest revision as of 15:53, 26 September 2015
Short description: | p1@Ggta1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Ggta1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000113001, ENSMUST00000113002_5end |
EntrezGene: | Ggta1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.02e-16 | 87 |
mesoderm | 1.20e-11 | 120 |
mesoderm-derived structure | 1.20e-11 | 120 |
presumptive mesoderm | 1.20e-11 | 120 |
splanchnic layer of lateral plate mesoderm | 1.11e-10 | 33 |
cardiovascular system | 1.72e-08 | 23 |
circulatory system | 1.72e-08 | 23 |
hemolymphoid system | 4.65e-08 | 48 |
immune system | 4.65e-08 | 48 |
musculoskeletal system | 4.96e-08 | 32 |
hematopoietic system | 7.69e-08 | 45 |
blood island | 7.69e-08 | 45 |
primary circulatory organ | 1.76e-07 | 18 |
heart | 1.76e-07 | 18 |
primitive heart tube | 1.76e-07 | 18 |
primary heart field | 1.76e-07 | 18 |
anterior lateral plate mesoderm | 1.76e-07 | 18 |
heart tube | 1.76e-07 | 18 |
heart primordium | 1.76e-07 | 18 |
cardiac mesoderm | 1.76e-07 | 18 |
cardiogenic plate | 1.76e-07 | 18 |
heart rudiment | 1.76e-07 | 18 |