FFCP PHASE1:Mm9::chrX:91787323..91787370,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=94275 | |EntrezGene=94275 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1662 | |||
|TSSclassifier=NA | |||
|UniProt=F6YTL0 | |UniProt=F6YTL0 | ||
|association_with_transcript=0bp_to_ENSMUST00000133982,ENSMUST00000153386,ENSMUST00000163883_5end | |association_with_transcript=0bp_to_ENSMUST00000133982,ENSMUST00000153386,ENSMUST00000163883_5end | ||
|cluster_id=chrX:91787323..91787370,- | |||
|description=CAGE_peak_1_at_Maged1_5end | |description=CAGE_peak_1_at_Maged1_5end | ||
|id=chrX:91787323..91787370,- | |id=chrX:91787323..91787370,- | ||
|ontology_enrichment_celltype=CL:0002319!1.59e-17!43;CL:0000221!2.17e-17!44;CL:0000133!2.17e-17!44;CL:0000540!4.89e-16!33;CL:0000047!4.89e-16!33;CL:0000031!4.89e-16!33;CL:0000404!4.89e-16!33;CL:0000055!1.39e-15!50;CL:0000393!1.86e-14!39;CL:0000211!1.86e-14!39;CL:0000117!1.21e-13!23;CL:0000337!1.21e-13!23;CL:0002321!1.21e-07!70;CL:0000220!1.21e-07!70 | |ontology_enrichment_celltype=CL:0002319!1.59e-17!43;CL:0000221!2.17e-17!44;CL:0000133!2.17e-17!44;CL:0000540!4.89e-16!33;CL:0000047!4.89e-16!33;CL:0000031!4.89e-16!33;CL:0000404!4.89e-16!33;CL:0000055!1.39e-15!50;CL:0000393!1.86e-14!39;CL:0000211!1.86e-14!39;CL:0000117!1.21e-13!23;CL:0000337!1.21e-13!23;CL:0002321!1.21e-07!70;CL:0000220!1.21e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.59e-17,43;CL:0000221,2.17e-17,44;CL:0000133,2.17e-17,44;CL:0000540,4.89e-16,33;CL:0000047,4.89e-16,33;CL:0000031,4.89e-16,33;CL:0000404,4.89e-16,33;CL:0000393,1.85e-14,39;CL:0000211,1.85e-14,39;CL:0000117,1.21e-13,23;CL:0000337,1.21e-13,23;CL:0002321,1.21e-07,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.69e-21!73;UBERON:0005743!2.69e-21!73;UBERON:0000073!5.73e-20!75;UBERON:0001016!5.73e-20!75;UBERON:0004121!3.42e-17!102;UBERON:0000924!3.42e-17!102;UBERON:0006601!3.42e-17!102;UBERON:0002346!1.47e-15!71;UBERON:0003075!1.47e-15!71;UBERON:0007284!1.47e-15!71;UBERON:0001049!7.91e-14!52;UBERON:0005068!7.91e-14!52;UBERON:0006241!7.91e-14!52;UBERON:0007135!7.91e-14!52;UBERON:0002616!6.63e-12!49;UBERON:0000033!6.69e-12!63;UBERON:0000955!7.70e-12!50;UBERON:0006238!7.70e-12!50;UBERON:0003056!1.52e-11!49;UBERON:0003080!1.25e-10!40;UBERON:0002780!2.29e-10!39;UBERON:0001890!2.29e-10!39;UBERON:0006240!2.29e-10!39;UBERON:0002020!2.91e-09!34;UBERON:0000468!1.69e-08!333;UBERON:0000922!1.56e-07!328 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.68e-21,73;UBERON:0001016,5.73e-20,75;UBERON:0004121,2.14e-17,95;UBERON:0000924,2.14e-17,95;UBERON:0006601,2.14e-17,95;UBERON:0002346,3.90e-16,64;UBERON:0003075,3.90e-16,64;UBERON:0007284,3.90e-16,64;UBERON:0000073,1.01e-14,54;UBERON:0001049,7.91e-14,52;UBERON:0005068,7.91e-14,52;UBERON:0006241,7.91e-14,52;UBERON:0007135,7.91e-14,52;UBERON:0010314,4.12e-13,92;UBERON:0010371,5.79e-13,73;UBERON:0003056,1.52e-11,49;UBERON:0002616,5.55e-11,46;UBERON:0000955,6.43e-11,47;UBERON:0006238,6.43e-11,47;UBERON:0003080,1.25e-10,40;UBERON:0002780,2.29e-10,39;UBERON:0001890,2.29e-10,39;UBERON:0006240,2.29e-10,39;UBERON:0002020,2.90e-09,34 | |||
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| ||
|short_description=p1@Maged1 | |short_description=p1@Maged1 | ||
}} | }} |
Latest revision as of 00:49, 2 October 2015
Short description: | p1@Maged1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Maged1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1662 |
Association with transcript: | 0bp_to_ENSMUST00000133982, ENSMUST00000153386, ENSMUST00000163883_5end |
EntrezGene: | Maged1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.59e-17 | 43 |
ectodermal cell | 2.17e-17 | 44 |
neurectodermal cell | 2.17e-17 | 44 |
neuron | 4.89e-16 | 33 |
neuronal stem cell | 4.89e-16 | 33 |
neuroblast | 4.89e-16 | 33 |
electrically signaling cell | 4.89e-16 | 33 |
electrically responsive cell | 1.85e-14 | 39 |
electrically active cell | 1.85e-14 | 39 |
CNS neuron (sensu Vertebrata) | 1.21e-13 | 23 |
neuroblast (sensu Vertebrata) | 1.21e-13 | 23 |
embryonic cell | 1.21e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 2.68e-21 | 73 |
nervous system | 5.73e-20 | 75 |
ectoderm-derived structure | 2.14e-17 | 95 |
ectoderm | 2.14e-17 | 95 |
presumptive ectoderm | 2.14e-17 | 95 |
neurectoderm | 3.90e-16 | 64 |
neural plate | 3.90e-16 | 64 |
presumptive neural plate | 3.90e-16 | 64 |
regional part of nervous system | 1.01e-14 | 54 |
neural tube | 7.91e-14 | 52 |
neural rod | 7.91e-14 | 52 |
future spinal cord | 7.91e-14 | 52 |
neural keel | 7.91e-14 | 52 |
structure with developmental contribution from neural crest | 4.12e-13 | 92 |
ecto-epithelium | 5.79e-13 | 73 |
pre-chordal neural plate | 1.52e-11 | 49 |
regional part of brain | 5.55e-11 | 46 |
brain | 6.43e-11 | 47 |
future brain | 6.43e-11 | 47 |
anterior neural tube | 1.25e-10 | 40 |
regional part of forebrain | 2.29e-10 | 39 |
forebrain | 2.29e-10 | 39 |
future forebrain | 2.29e-10 | 39 |
gray matter | 2.90e-09 | 34 |