FFCP PHASE1:Mm9::chrX:7709523..7709550,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=73447 | |EntrezGene=73447 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=86bp_to_ENSMUST00000149257_5end | |association_with_transcript=86bp_to_ENSMUST00000149257_5end | ||
|cluster_id=chrX:7709523..7709550,- | |||
|description=CAGE_peak_3_at_Wdr13_5end | |description=CAGE_peak_3_at_Wdr13_5end | ||
|id=chrX:7709523..7709550,- | |id=chrX:7709523..7709550,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002453,9.43e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!2.44e-15!122;UBERON:0000955!1.44e-14!50;UBERON:0006238!1.44e-14!50;UBERON:0000025!5.21e-14!114;UBERON:0002616!5.63e-14!49;UBERON:0001049!1.33e-13!52;UBERON:0005068!1.33e-13!52;UBERON:0006241!1.33e-13!52;UBERON:0007135!1.33e-13!52;UBERON:0000033!8.71e-13!63;UBERON:0001017!3.76e-12!73;UBERON:0005743!3.76e-12!73;UBERON:0000073!2.48e-11!75;UBERON:0001016!2.48e-11!75;UBERON:0004121!1.46e-10!102;UBERON:0000924!1.46e-10!102;UBERON:0006601!1.46e-10!102;UBERON:0002346!5.94e-10!71;UBERON:0003075!5.94e-10!71;UBERON:0007284!5.94e-10!71;UBERON:0003080!1.73e-09!40;UBERON:0002780!6.05e-09!39;UBERON:0001890!6.05e-09!39;UBERON:0006240!6.05e-09!39;UBERON:0003056!8.05e-08!49;UBERON:0000062!1.75e-07!269;UBERON:0000477!2.43e-07!154;UBERON:0000480!3.17e-07!308;UBERON:0000467!3.17e-07!308;UBERON:0000475!6.21e-07!200 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004111,8.78e-17,122;UBERON:0000073,8.88e-17,54;UBERON:0000025,1.56e-15,114;UBERON:0001049,2.20e-15,52;UBERON:0005068,2.20e-15,52;UBERON:0006241,2.20e-15,52;UBERON:0007135,2.20e-15,52;UBERON:0000955,4.30e-15,47;UBERON:0006238,4.30e-15,47;UBERON:0002616,2.01e-14,46;UBERON:0001017,4.44e-14,73;UBERON:0001016,4.39e-13,75;UBERON:0010314,2.22e-12,92;UBERON:0002346,1.60e-11,64;UBERON:0003075,1.60e-11,64;UBERON:0007284,1.60e-11,64;UBERON:0004121,1.67e-11,95;UBERON:0000924,1.67e-11,95;UBERON:0006601,1.67e-11,95;UBERON:0003080,4.89e-11,40;UBERON:0002780,2.11e-10,39;UBERON:0001890,2.11e-10,39;UBERON:0006240,2.11e-10,39;UBERON:0010371,2.46e-10,73;UBERON:0003056,5.72e-09,49;UBERON:0002020,5.80e-07,34 | |||
|phase1_expression=1.12104192973356,1.04692622291808,0.454999239389536,0.30246421130683,0,0.671517087647559,1.16806320297763,0.903863264091034,0,0,0.171217968225505,0.159544317990673,0.513602189793617,0.34968160967599,0,0,0,0.788655413395594,0.411343300817216,0.42438965179803,2.38121212422995,1.58865521921416,0.783599367416806,1.27993938234725,0.91763712426868,0.57423196411502,0.86152399231815,1.07735616342945,1.14014051673824,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0.577703239502549,0.664938581433969,1.22501613757421,1.25559489221072,0,2.61761871986899,1.17646297606203,0.683045484958446,0.971020706062307,2.64383317748712,2.23029248682932,2.38610777810186,2.34717403304412,3.70642765846759,11.2039953194581,12.8323733389027,5.73944328663986,2.87505128729943,0.167782606057736,0,0.336093799142464,0.514518872071894,0,1.03134418455488,0.809265843438391,2.11596391708813,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,7.19040265244171,15.7529505181837,0.518448061542388,0.540023753326763,0.210324961351382,2.28520787523043,3.75476519617743,0.244981598429908,0.191690942036473,0.919218786610021,6.60695285996332,4.34136949489638,2.76491759861238,1.84640802822271,2.10421580285542,1.04182674111352,3.90856198601933,6.19038871034848,3.97275444219706,1.17851434189467,2.13557521198654,0.931997229126503,0.681535739998656,0.377857800533928,2.02905142091174,1.72084775396277,1.3599426674155,0,3.89865850468601,2.24013443548668,1.26399978118577,1.36344258062446,2.07828803682295,0.35333957451034,1.69012103732017,1.28326477414318,0,0,1.08245520505607,1.26679932737549,1.51657333504435,2.39786147410026,1.29468941823586,6.67989625791711,0,1.21786191324856,0.461230994512117,0.904335843315735,2.4693628498498,2.13633205260448,2.96633961281249,0.722996784599558,0,0.485300549842228,0.441683036920787,0.484875253135222,5.59175283654366,5.85561594023094,4.1889341362691,1.78819938646014,0.11981512450592,1.19980546198682,0.381210681219194,5.69204429738326,4.57500602818627,1.38219787324151,2.78118912307642,4.09144731728529,4.98691306942944,5.19172041816825,0.509196819251581,0.995255764880744,2.0217820674694,1.05220927943237,0.780722657776222,0.459804208866946,1.0803727788321,0.150704817835715,1.02054748726992,1.40925092313335,0.749613796477831,2.58703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0.702213187313235,0.772043721344145,0.284163499395593,1.03562886267751,0.703578179943289,1.98068267607116,1.42046841351126,1.37734962223183,1.3884040159864,0.930135779001631,1.60964040839772,2.10177616260905,2.30383789878873,2.79084688934462,1.4592385718254,1.75439984910399,1.09775057645525,1.34206418760372,2.3131894342054,1.3377599609307,0.330418782983798,0.793351699990633,0.426576501070468,0.928946687441754,0.128867461322093,0.605050573870028,0.889512175379481,1.52180500890047,0.949058123089023,0.823494773620054,1.25667604400135,2.78539060857611,0.779856348476481,1.79763881730844,0.216138049874694,1.1948476395262,0.379335801906163,0.799739588268102,1.1270773567308,2.03651327845314,2.71533482034676,2.94570443539338,2.90888070771584,4.28069429140846,4.23896565171712,4.81248939295022,1.1858105083486,0.333690211432188,0.589676985339609,0.224862112384854,0.202860121388503,0.964708639009667,0.25462585178142,0.575392274901621,0.972811360650212,0.274561413188081,1.43768206527355,1.86070473834252,1.24815069245824,1.51547326768267,1.25578189465339,1.92977408545347,3.8798169934987,0.189491411770485,0.488894929326078,0.848725428875941,1.64283173801951,1.84256883185997,3.33261097240419,2.34160377429359,1.7339865851681,1.99318220683897,1.75400245523236,2.13022309130459,3.10832967358612,3.03763023021174,0,1.08781136763742,1.47529281905711,2.20749397043786,4.49541651965817,3.5163505977661,0.655739781506702,0.757412781613119,0.631016438832513,0,0.430846795465598,0.477937595905104,0.445597348164788,0.849229592366497,0.404810701674894,0.292255857911312,0,5.14114106274891,2.12910127812403,0.534196811001766,0.977321756121456,1.31976098378028,2.65490276679926,2.18502572539483,0.604647113929502,1.88605079755898,1.47650946440386,1.53717573971964,1.55056975900933,2.18120237686503,0.356497378384721,1.26414703174326,4.21674434299995,3.09406629744561,4.76615448055303,1.62054984628179,1.68166288917581,1.92903331528433,3.01478397191865,2.85390108163313,2.13913726782757,3.65357938937519,0.704015124191131,3.1774810629573,2.42581237860458,0.65954501176592,1.13025098687134,0.72375509913787,0.835606408021955,0.492422699235184,0.874442509889552,2.59595422814714,0.170870880797853,0,0.555583582109135,0.188368457004691,0.27338845544205,0,1.18984900995699,0.979660166265606,0.276399947608848,0.954670618015114,0.474503990371703,0.609958401380546,1.29606408986162,1.46361807210128,0.436725127492355,1.21377911746339,1.65306911450672,2.09404753587224,1.42576470620972,1.24267862617385,0.56369293868419,0.448549638131936,0,0.777804753376191,0.129159823477731,0.844780627453891,0.938857909166032,0.781226309063701,0.838874755405687,1.69108884578204,0.288030006257865,1.58005560314089,0.608175645870493,0.924398614483445,0.909445760844565,1.07416017400489,0.596044064343795,0.600977247599844,0.886137163047463,0.807731599585181,1.06689529317,0.302478555410522,0.194915761479505,0.288635524920988,1.28564592399726,2.0405734525369,0.443971906748129,0.62799699626633,0.335769232728157,1.9318959403219,2.81523713176773,1.46521299413812,0.857473516316263,2.00628841614145,5.64751842617067,2.30162618253588,2.29158205375759,2.40594455281163,2.05524755931193,3.0215755895588,6.07520250208625,1.35096360967266,3.62513927187364,4.14208249401456,0.31136204275253,0.399024873401031,0.853668028770671,0.729320151204882,1.25767897576789,0.919217542250071,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,1.13175804831646,0.842773567228942,0.640251524048693,0.631790158511746,0,0.927074607558844,1.15745532278223,0.412085900803307,0.588795680537589,2.05721551431249,0.70990322463735,0.953744759789284,0.581385666529314,1.41164070622996,0.846146078916765,0.548783918618318,0,0.814824683075171,0,0.830445126869219,0.394017929502254,0.409231043169689,0.619747364743864,0.964533054905707,0.999242311751784,1.63752125911786,2.79332370262788,1.53030665655075,0.220591419119515,0.463735671240843 | |phase1_expression=1.12104192973356,1.04692622291808,0.454999239389536,0.30246421130683,0,0.671517087647559,1.16806320297763,0.903863264091034,0,0,0.171217968225505,0.159544317990673,0.513602189793617,0.34968160967599,0,0,0,0.788655413395594,0.411343300817216,0.42438965179803,2.38121212422995,1.58865521921416,0.783599367416806,1.27993938234725,0.91763712426868,0.57423196411502,0.86152399231815,1.07735616342945,1.14014051673824,0.504060259519861,0.665191531965914,0.635030673459631,0,0,0.577703239502549,0.664938581433969,1.22501613757421,1.25559489221072,0,2.61761871986899,1.17646297606203,0.683045484958446,0.971020706062307,2.64383317748712,2.23029248682932,2.38610777810186,2.34717403304412,3.70642765846759,11.2039953194581,12.8323733389027,5.73944328663986,2.87505128729943,0.167782606057736,0,0.336093799142464,0.514518872071894,0,1.03134418455488,0.809265843438391,2.11596391708813,0.633831403506179,0.338844532069132,0.889294796111139,0,0,0,7.19040265244171,15.7529505181837,0.518448061542388,0.540023753326763,0.210324961351382,2.28520787523043,3.75476519617743,0.244981598429908,0.191690942036473,0.919218786610021,6.60695285996332,4.34136949489638,2.76491759861238,1.84640802822271,2.10421580285542,1.04182674111352,3.90856198601933,6.19038871034848,3.97275444219706,1.17851434189467,2.13557521198654,0.931997229126503,0.681535739998656,0.377857800533928,2.02905142091174,1.72084775396277,1.3599426674155,0,3.89865850468601,2.24013443548668,1.26399978118577,1.36344258062446,2.07828803682295,0.35333957451034,1.69012103732017,1.28326477414318,0,0,1.08245520505607,1.26679932737549,1.51657333504435,2.39786147410026,1.29468941823586,6.67989625791711,0,1.21786191324856,0.461230994512117,0.904335843315735,2.4693628498498,2.13633205260448,2.96633961281249,0.722996784599558,0,0.485300549842228,0.441683036920787,0.484875253135222,5.59175283654366,5.85561594023094,4.1889341362691,1.78819938646014,0.11981512450592,1.19980546198682,0.381210681219194,5.69204429738326,4.57500602818627,1.38219787324151,2.78118912307642,4.09144731728529,4.98691306942944,5.19172041816825,0.509196819251581,0.995255764880744,2.0217820674694,1.05220927943237,0.780722657776222,0.459804208866946,1.0803727788321,0.150704817835715,1.02054748726992,1.40925092313335,0.749613796477831,2.58703370739016,0,0.189106080167819,0.175951124163949,0.219195732427575,0.556094498451196,0,0.205782136407943,0.59710280045548,0.702213187313235,0.772043721344145,0.284163499395593,1.03562886267751,0.703578179943289,1.98068267607116,1.42046841351126,1.37734962223183,1.3884040159864,0.930135779001631,1.60964040839772,2.10177616260905,2.30383789878873,2.79084688934462,1.4592385718254,1.75439984910399,1.09775057645525,1.34206418760372,2.3131894342054,1.3377599609307,0.330418782983798,0.793351699990633,0.426576501070468,0.928946687441754,0.128867461322093,0.605050573870028,0.889512175379481,1.52180500890047,0.949058123089023,0.823494773620054,1.25667604400135,2.78539060857611,0.779856348476481,1.79763881730844,0.216138049874694,1.1948476395262,0.379335801906163,0.799739588268102,1.1270773567308,2.03651327845314,2.71533482034676,2.94570443539338,2.90888070771584,4.28069429140846,4.23896565171712,4.81248939295022,1.1858105083486,0.333690211432188,0.589676985339609,0.224862112384854,0.202860121388503,0.964708639009667,0.25462585178142,0.575392274901621,0.972811360650212,0.274561413188081,1.43768206527355,1.86070473834252,1.24815069245824,1.51547326768267,1.25578189465339,1.92977408545347,3.8798169934987,0.189491411770485,0.488894929326078,0.848725428875941,1.64283173801951,1.84256883185997,3.33261097240419,2.34160377429359,1.7339865851681,1.99318220683897,1.75400245523236,2.13022309130459,3.10832967358612,3.03763023021174,0,1.08781136763742,1.47529281905711,2.20749397043786,4.49541651965817,3.5163505977661,0.655739781506702,0.757412781613119,0.631016438832513,0,0.430846795465598,0.477937595905104,0.445597348164788,0.849229592366497,0.404810701674894,0.292255857911312,0,5.14114106274891,2.12910127812403,0.534196811001766,0.977321756121456,1.31976098378028,2.65490276679926,2.18502572539483,0.604647113929502,1.88605079755898,1.47650946440386,1.53717573971964,1.55056975900933,2.18120237686503,0.356497378384721,1.26414703174326,4.21674434299995,3.09406629744561,4.76615448055303,1.62054984628179,1.68166288917581,1.92903331528433,3.01478397191865,2.85390108163313,2.13913726782757,3.65357938937519,0.704015124191131,3.1774810629573,2.42581237860458,0.65954501176592,1.13025098687134,0.72375509913787,0.835606408021955,0.492422699235184,0.874442509889552,2.59595422814714,0.170870880797853,0,0.555583582109135,0.188368457004691,0.27338845544205,0,1.18984900995699,0.979660166265606,0.276399947608848,0.954670618015114,0.474503990371703,0.609958401380546,1.29606408986162,1.46361807210128,0.436725127492355,1.21377911746339,1.65306911450672,2.09404753587224,1.42576470620972,1.24267862617385,0.56369293868419,0.448549638131936,0,0.777804753376191,0.129159823477731,0.844780627453891,0.938857909166032,0.781226309063701,0.838874755405687,1.69108884578204,0.288030006257865,1.58005560314089,0.608175645870493,0.924398614483445,0.909445760844565,1.07416017400489,0.596044064343795,0.600977247599844,0.886137163047463,0.807731599585181,1.06689529317,0.302478555410522,0.194915761479505,0.288635524920988,1.28564592399726,2.0405734525369,0.443971906748129,0.62799699626633,0.335769232728157,1.9318959403219,2.81523713176773,1.46521299413812,0.857473516316263,2.00628841614145,5.64751842617067,2.30162618253588,2.29158205375759,2.40594455281163,2.05524755931193,3.0215755895588,6.07520250208625,1.35096360967266,3.62513927187364,4.14208249401456,0.31136204275253,0.399024873401031,0.853668028770671,0.729320151204882,1.25767897576789,0.919217542250071,0.44449345560323,0.618105171716683,0.64183841918363,0.758091635291392,0.50695859978048,1.13175804831646,0.842773567228942,0.640251524048693,0.631790158511746,0,0.927074607558844,1.15745532278223,0.412085900803307,0.588795680537589,2.05721551431249,0.70990322463735,0.953744759789284,0.581385666529314,1.41164070622996,0.846146078916765,0.548783918618318,0,0.814824683075171,0,0.830445126869219,0.394017929502254,0.409231043169689,0.619747364743864,0.964533054905707,0.999242311751784,1.63752125911786,2.79332370262788,1.53030665655075,0.220591419119515,0.463735671240843 | ||
|short_description=p3@Wdr13 | |short_description=p3@Wdr13 | ||
}} | }} |
Latest revision as of 00:38, 2 October 2015
Short description: | p3@Wdr13 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Wdr13_5end |
Coexpression cluster: | NA |
Association with transcript: | 86bp_to_ENSMUST00000149257_5end |
EntrezGene: | Wdr13 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 9.43e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
anatomical conduit | 8.78e-17 | 122 |
regional part of nervous system | 8.88e-17 | 54 |
tube | 1.56e-15 | 114 |
neural tube | 2.20e-15 | 52 |
neural rod | 2.20e-15 | 52 |
future spinal cord | 2.20e-15 | 52 |
neural keel | 2.20e-15 | 52 |
brain | 4.30e-15 | 47 |
future brain | 4.30e-15 | 47 |
regional part of brain | 2.01e-14 | 46 |
central nervous system | 4.44e-14 | 73 |
nervous system | 4.39e-13 | 75 |
structure with developmental contribution from neural crest | 2.22e-12 | 92 |
neurectoderm | 1.60e-11 | 64 |
neural plate | 1.60e-11 | 64 |
presumptive neural plate | 1.60e-11 | 64 |
ectoderm-derived structure | 1.67e-11 | 95 |
ectoderm | 1.67e-11 | 95 |
presumptive ectoderm | 1.67e-11 | 95 |
anterior neural tube | 4.89e-11 | 40 |
regional part of forebrain | 2.11e-10 | 39 |
forebrain | 2.11e-10 | 39 |
future forebrain | 2.11e-10 | 39 |
ecto-epithelium | 2.46e-10 | 73 |
pre-chordal neural plate | 5.72e-09 | 49 |
gray matter | 5.80e-07 | 34 |