FFCP PHASE1:Mm9::chr2:160934772..160934827,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=71389 | |EntrezGene=71389 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=473 | |||
|TSSclassifier=NA | |||
|UniProt=A3KFM7,Q80TE9,Q80YD0,Q8BIE8,Q8BJ75 | |UniProt=A3KFM7,Q80TE9,Q80YD0,Q8BIE8,Q8BJ75 | ||
|association_with_transcript=0bp_to_ENSMUST00000138078,NM_173368,uc008nrn.1,uc008nrp.1,uc008nrr.1,uc012cim.1,uc012cin.1_5end | |association_with_transcript=0bp_to_ENSMUST00000138078,NM_173368,uc008nrn.1,uc008nrp.1,uc008nrr.1,uc012cim.1,uc012cin.1_5end | ||
|cluster_id=chr2:160934772..160934827,- | |||
|description=CAGE_peak_1_at_Chd6_5end | |description=CAGE_peak_1_at_Chd6_5end | ||
|id=chr2:160934772..160934827,- | |id=chr2:160934772..160934827,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000153!1.66e-12!94;UBERON:0000033!8.55e-12!63;UBERON:0007811!1.77e-10!86;UBERON:0003056!2.50e-09!49;UBERON:0000955!6.87e-08!50;UBERON:0006238!6.87e-08!50;UBERON:0000468!8.12e-08!333;UBERON:0002346!9.53e-08!71;UBERON:0003075!9.53e-08!71;UBERON:0007284!9.53e-08!71;UBERON:0002616!2.06e-07!49 | |ontology_enrichment_uberon=UBERON:0000153!1.66e-12!94;UBERON:0000033!8.55e-12!63;UBERON:0007811!1.77e-10!86;UBERON:0003056!2.50e-09!49;UBERON:0000955!6.87e-08!50;UBERON:0006238!6.87e-08!50;UBERON:0000468!8.12e-08!333;UBERON:0002346!9.53e-08!71;UBERON:0003075!9.53e-08!71;UBERON:0007284!9.53e-08!71;UBERON:0002616!2.06e-07!49 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010371,3.30e-10,73;UBERON:0002346,1.40e-09,64;UBERON:0003075,1.40e-09,64;UBERON:0007284,1.40e-09,64;UBERON:0003056,2.51e-09,49;UBERON:0004121,1.34e-07,95;UBERON:0000924,1.34e-07,95;UBERON:0006601,1.34e-07,95;UBERON:0010314,2.08e-07,92 | |||
|phase1_expression=20.6592012765184,1.39590163055744,1.36499771816861,2.72217790176147,6.01074875935617,8.2260843236826,7.47560449905682,13.2997023144824,7.32101355188667,7.95819389494778,6.67750076079469,9.25357044345902,10.6144452557348,13.8998439846206,4.99664642723494,7.49158489342356,7.69518065940961,14.1957974411207,17.1393042007173,12.3072999021429,17.6039610612714,12.7092417537133,7.05239430675126,5.75972722056264,4.5881856213434,2.29692785646008,1.7230479846363,4.30942465371778,3.99049180858385,4.53654233567875,4.8780712344167,5.71527606113668,3.07532393792285,0,9.82095507154334,6.31691652362271,12.4543307320045,7.95210098400125,4.6880120671428,9.94695113550217,4.70585190424811,5.46436387966757,8.73918635456076,21.5283558738237,18.4506014819517,13.9495531642878,1.56478268869608,1.09012578190223,0.659058548203415,1.94429899074283,1.67983705950435,1.43752564364972,9.56360854529097,5.80289713609076,8.73843877770406,4.88792928468299,7.73640287834643,8.76642556871652,13.9598357993122,17.4567023159771,8.87363964908651,2.37191172448392,1.77858959222228,1.7997994345628,0.988866362566974,0,2.09720077362883,1.53687322128622,14.6202353354953,11.0704869431986,13.8814474491912,7.42692559449889,6.18431914664518,17.1487118900936,14.9518934788449,10.1114066527102,26.4278114398533,28.8573384072524,34.2542569161423,12.265424758908,14.0890971147711,17.7110545989298,21.7762739221077,18.5711661310454,23.6837284054056,13.258286346315,18.9354335462807,16.9623495701024,5.37655972665607,7.48158445057177,20.2905142091174,6.88339101585109,2.03991400112325,4.85732872474035,5.84798775702902,4.48026887097336,8.00533194750986,9.37366774179318,3.63700406444016,5.3000936176551,15.6336195952115,10.2661181931454,10.1922095882658,7.11066703153331,2.81438353314578,2.28023878927589,6.0662933401774,7.87868770061514,26.4116641320115,12.6175818205101,10.7560902595004,9.13396434936424,7.14908041493781,10.8520301197888,16.4624189989987,11.5613264023301,8.40462890296871,22.5574996795062,5.30766331169925,16.6619855445831,13.6921741445444,14.0613823409214,5.59175283654366,49.4799546949515,46.9160623262139,6.64188343542338,11.5022519525683,6.59893004092748,10.0385479387721,33.2535219478706,20.1300265240196,23.2460551408799,31.6360262749943,30.174423964979,29.7136903720171,26.4453258800445,18.6366035846079,13.31154585528,11.8779696463827,22.7277204357392,26.6746908073543,18.6220704591113,25.9289466919703,29.086029842293,35.9232715519011,51.7579429950793,35.3255501590178,39.8403190938084,14.2274875335676,25.15110866232,25.6888641279365,15.5628970023578,23.6340161841758,19.8503734917635,20.1666493679785,20.3014952154863,7.72434506044558,7.72043721344146,6.53576048609863,11.1847917169171,13.3679854189225,18.1862682075625,18.7028341112316,17.1184881620241,16.9693824176116,19.7653853037847,15.8281306825775,18.9159854634815,19.5826221397042,22.326775114757,17.6730004809965,16.0819986167866,13.173006917463,13.1522290385164,25.6553737248235,25.4174392576833,8.92130714056255,5.28901133327089,19.8358072997768,19.9723537799977,21.2631311181454,20.1683524623343,13.3426826306922,9.89173255785308,5.69434873853414,6.58795818896044,17.3421294072186,17.3092130675801,12.8676297498619,7.19055526923377,9.51007419448655,12.5459002150251,8.34538764193559,19.0795016058247,21.4144697778853,18.9395734896142,19.0073437424273,22.7240056444632,19.6033265085198,15.3514553898786,13.5018905943582,10.7355532611966,4.15033677922008,10.8449318715461,9.23827277032054,9.44420872016386,12.3744674046987,6.99413763282009,6.3656462945355,7.76779571117189,10.2145192868272,5.76578967694971,28.7536413054709,12.6527922207291,9.98520553966594,11.36604950762,9.86685774370517,6.27176577772377,12.1937105509959,17.4332098828846,22.6521317254416,25.292017780503,28.3975200429088,26.9685074481323,16.663054862021,15.4155581807661,29.3201368037515,23.4752571027701,26.4694915971429,18.5165545628784,21.5856227332369,19.8169210256671,4.52373851817817,5.4390568381871,7.37646409528554,10.4855963595798,28.8991061978026,37.2733163363206,3.44263385291018,11.3611917241968,16.7219356290616,17.1793047490521,20.6806461823487,12.6653462914853,16.932699230262,18.1168979704853,16.5972387686707,13.151513606009,13.0444966722353,33.0960955914461,17.3166903954088,9.97167380536629,18.0804524882469,17.4868330350888,15.9294166007955,15.2951800777638,11.7906187216253,16.7858520982749,6.496641643377,14.4494519533646,12.1461297789064,15.2684166380552,18.1813662976208,18.962205476149,13.7044191147498,16.5016869197099,22.8094535855038,19.2665370613502,6.85601024048599,16.5039516974326,19.6847659342924,17.3017753074008,14.973960874793,6.08929898229199,9.38686832254841,11.0152676849186,13.0111754852428,25.2275967000464,21.9591620306432,18.9382584274409,18.383340976483,19.0403443704271,7.28702091574627,30.9660254357551,7.00570611271196,16.9237231729842,12.9636169158798,12.809055076319,14.8996708215917,11.6676868335327,14.7881234094654,18.3336402543992,16.5839968565309,9.54670618015114,21.1945115699361,17.6887936400358,17.928886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| |phase1_expression=20.6592012765184,1.39590163055744,1.36499771816861,2.72217790176147,6.01074875935617,8.2260843236826,7.47560449905682,13.2997023144824,7.32101355188667,7.95819389494778,6.67750076079469,9.25357044345902,10.6144452557348,13.8998439846206,4.99664642723494,7.49158489342356,7.69518065940961,14.1957974411207,17.1393042007173,12.3072999021429,17.6039610612714,12.7092417537133,7.05239430675126,5.75972722056264,4.5881856213434,2.29692785646008,1.7230479846363,4.30942465371778,3.99049180858385,4.53654233567875,4.8780712344167,5.71527606113668,3.07532393792285,0,9.82095507154334,6.31691652362271,12.4543307320045,7.95210098400125,4.6880120671428,9.94695113550217,4.70585190424811,5.46436387966757,8.73918635456076,21.5283558738237,18.4506014819517,13.9495531642878,1.56478268869608,1.09012578190223,0.659058548203415,1.94429899074283,1.67983705950435,1.43752564364972,9.56360854529097,5.80289713609076,8.73843877770406,4.88792928468299,7.73640287834643,8.76642556871652,13.9598357993122,17.4567023159771,8.87363964908651,2.37191172448392,1.77858959222228,1.7997994345628,0.988866362566974,0,2.09720077362883,1.53687322128622,14.6202353354953,11.0704869431986,13.8814474491912,7.42692559449889,6.18431914664518,17.1487118900936,14.9518934788449,10.1114066527102,26.4278114398533,28.8573384072524,34.2542569161423,12.265424758908,14.0890971147711,17.7110545989298,21.7762739221077,18.5711661310454,23.6837284054056,13.258286346315,18.9354335462807,16.9623495701024,5.37655972665607,7.48158445057177,20.2905142091174,6.88339101585109,2.03991400112325,4.85732872474035,5.84798775702902,4.48026887097336,8.00533194750986,9.37366774179318,3.63700406444016,5.3000936176551,15.6336195952115,10.2661181931454,10.1922095882658,7.11066703153331,2.81438353314578,2.28023878927589,6.0662933401774,7.87868770061514,26.4116641320115,12.6175818205101,10.7560902595004,9.13396434936424,7.14908041493781,10.8520301197888,16.4624189989987,11.5613264023301,8.40462890296871,22.5574996795062,5.30766331169925,16.6619855445831,13.6921741445444,14.0613823409214,5.59175283654366,49.4799546949515,46.9160623262139,6.64188343542338,11.5022519525683,6.59893004092748,10.0385479387721,33.2535219478706,20.1300265240196,23.2460551408799,31.6360262749943,30.174423964979,29.7136903720171,26.4453258800445,18.6366035846079,13.31154585528,11.8779696463827,22.7277204357392,26.6746908073543,18.6220704591113,25.9289466919703,29.086029842293,35.9232715519011,51.7579429950793,35.3255501590178,39.8403190938084,14.2274875335676,25.15110866232,25.6888641279365,15.5628970023578,23.6340161841758,19.8503734917635,20.1666493679785,20.3014952154863,7.72434506044558,7.72043721344146,6.53576048609863,11.1847917169171,13.3679854189225,18.1862682075625,18.7028341112316,17.1184881620241,16.9693824176116,19.7653853037847,15.8281306825775,18.9159854634815,19.5826221397042,22.326775114757,17.6730004809965,16.0819986167866,13.173006917463,13.1522290385164,25.6553737248235,25.4174392576833,8.92130714056255,5.28901133327089,19.8358072997768,19.9723537799977,21.2631311181454,20.1683524623343,13.3426826306922,9.89173255785308,5.69434873853414,6.58795818896044,17.3421294072186,17.3092130675801,12.8676297498619,7.19055526923377,9.51007419448655,12.5459002150251,8.34538764193559,19.0795016058247,21.4144697778853,18.9395734896142,19.0073437424273,22.7240056444632,19.6033265085198,15.3514553898786,13.5018905943582,10.7355532611966,4.15033677922008,10.8449318715461,9.23827277032054,9.44420872016386,12.3744674046987,6.99413763282009,6.3656462945355,7.76779571117189,10.2145192868272,5.76578967694971,28.7536413054709,12.6527922207291,9.98520553966594,11.36604950762,9.86685774370517,6.27176577772377,12.1937105509959,17.4332098828846,22.6521317254416,25.292017780503,28.3975200429088,26.9685074481323,16.663054862021,15.4155581807661,29.3201368037515,23.4752571027701,26.4694915971429,18.5165545628784,21.5856227332369,19.8169210256671,4.52373851817817,5.4390568381871,7.37646409528554,10.4855963595798,28.8991061978026,37.2733163363206,3.44263385291018,11.3611917241968,16.7219356290616,17.1793047490521,20.6806461823487,12.6653462914853,16.932699230262,18.1168979704853,16.5972387686707,13.151513606009,13.0444966722353,33.0960955914461,17.3166903954088,9.97167380536629,18.0804524882469,17.4868330350888,15.9294166007955,15.2951800777638,11.7906187216253,16.7858520982749,6.496641643377,14.4494519533646,12.1461297789064,15.2684166380552,18.1813662976208,18.962205476149,13.7044191147498,16.5016869197099,22.8094535855038,19.2665370613502,6.85601024048599,16.5039516974326,19.6847659342924,17.3017753074008,14.973960874793,6.08929898229199,9.38686832254841,11.0152676849186,13.0111754852428,25.2275967000464,21.9591620306432,18.9382584274409,18.383340976483,19.0403443704271,7.28702091574627,30.9660254357551,7.00570611271196,16.9237231729842,12.9636169158798,12.809055076319,14.8996708215917,11.6676868335327,14.7881234094654,18.3336402543992,16.5839968565309,9.54670618015114,21.1945115699361,17.6887936400358,17.928886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| ||
|short_description=p1@Chd6 | |short_description=p1@Chd6 | ||
}} | }} |
Latest revision as of 01:37, 26 September 2015
Short description: | p1@Chd6 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Chd6_5end |
Coexpression cluster: | MCL_coexpression_mm9:473 |
Association with transcript: | 0bp_to_ENSMUST00000138078, NM_173368, uc008nrn.1, uc008nrp.1, uc008nrr.1, uc012cim.1, uc012cin.1_5end |
EntrezGene: | Chd6 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ecto-epithelium | 3.30e-10 | 73 |
neurectoderm | 1.40e-09 | 64 |
neural plate | 1.40e-09 | 64 |
presumptive neural plate | 1.40e-09 | 64 |
pre-chordal neural plate | 2.51e-09 | 49 |
ectoderm-derived structure | 1.34e-07 | 95 |
ectoderm | 1.34e-07 | 95 |
presumptive ectoderm | 1.34e-07 | 95 |
structure with developmental contribution from neural crest | 2.08e-07 | 92 |