FFCP PHASE1:Mm9::chr2:158235578..158235598,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=228850 | |EntrezGene=228850 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=F8WHN4,A2ACC6,Q8BQZ4,B2RRF1 | |UniProt=F8WHN4,A2ACC6,Q8BQZ4,B2RRF1 | ||
|association_with_transcript=0bp_to_ENSMUST00000046274,ENSMUST00000109486,NM_177658,uc008nqf.1,uc008nqg.1,uc008nqh.1,uc012cif.1,uc012cig.1_5end | |association_with_transcript=0bp_to_ENSMUST00000046274,ENSMUST00000109486,NM_177658,uc008nqf.1,uc008nqg.1,uc008nqh.1,uc012cif.1,uc012cig.1_5end | ||
|cluster_id=chr2:158235578..158235598,+ | |||
|description=CAGE_peak_2_at_Ralgapb_5end | |description=CAGE_peak_2_at_Ralgapb_5end | ||
|id=chr2:158235578..158235598,+ | |id=chr2:158235578..158235598,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000064!3.22e-15!99;UBERON:0007811!2.49e-12!86;UBERON:0000153!5.83e-12!94;UBERON:0007023!4.38e-11!51;UBERON:0000955!2.02e-10!50;UBERON:0006238!2.02e-10!50;UBERON:0002616!6.67e-10!49;UBERON:0000033!6.64e-09!63;UBERON:0001049!1.67e-08!52;UBERON:0005068!1.67e-08!52;UBERON:0006241!1.67e-08!52;UBERON:0007135!1.67e-08!52;UBERON:0002791!1.92e-08!29;UBERON:0003528!1.92e-08!29;UBERON:0001893!1.92e-08!29;UBERON:0003080!3.50e-08!40;UBERON:0002020!7.07e-08!34;UBERON:0002780!9.96e-08!39;UBERON:0001890!9.96e-08!39;UBERON:0006240!9.96e-08!39 | |ontology_enrichment_uberon=UBERON:0000064!3.22e-15!99;UBERON:0007811!2.49e-12!86;UBERON:0000153!5.83e-12!94;UBERON:0007023!4.38e-11!51;UBERON:0000955!2.02e-10!50;UBERON:0006238!2.02e-10!50;UBERON:0002616!6.67e-10!49;UBERON:0000033!6.64e-09!63;UBERON:0001049!1.67e-08!52;UBERON:0005068!1.67e-08!52;UBERON:0006241!1.67e-08!52;UBERON:0007135!1.67e-08!52;UBERON:0002791!1.92e-08!29;UBERON:0003528!1.92e-08!29;UBERON:0001893!1.92e-08!29;UBERON:0003080!3.50e-08!40;UBERON:0002020!7.07e-08!34;UBERON:0002780!9.96e-08!39;UBERON:0001890!9.96e-08!39;UBERON:0006240!9.96e-08!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,4.65e-11,51;UBERON:0000073,1.41e-09,54;UBERON:0000955,8.09e-09,47;UBERON:0006238,8.09e-09,47;UBERON:0001049,1.67e-08,52;UBERON:0005068,1.67e-08,52;UBERON:0006241,1.67e-08,52;UBERON:0007135,1.67e-08,52;UBERON:0003528,1.92e-08,29;UBERON:0002791,1.92e-08,29;UBERON:0001893,1.92e-08,29;UBERON:0002616,2.50e-08,46;UBERON:0003080,3.49e-08,40;UBERON:0011216,6.46e-08,194;UBERON:0002020,7.07e-08,34;UBERON:0002780,9.95e-08,39;UBERON:0001890,9.95e-08,39;UBERON:0006240,9.95e-08,39;UBERON:0000923,4.81e-07,291;UBERON:0010316,4.81e-07,291;UBERON:0005291,4.81e-07,291;UBERON:0006598,4.81e-07,291;UBERON:0010317,4.81e-07,291;UBERON:0002532,4.81e-07,291 | |||
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| ||
|short_description=p2@Ralgapb | |short_description=p2@Ralgapb | ||
}} | }} |
Latest revision as of 01:14, 26 September 2015
Short description: | p2@Ralgapb |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ralgapb_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000046274, ENSMUST00000109486, NM_177658, uc008nqf.1, uc008nqg.1, uc008nqh.1, uc012cif.1, uc012cig.1_5end |
EntrezGene: | Ralgapb |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adult organism | 4.65e-11 | 51 |
regional part of nervous system | 1.41e-09 | 54 |
brain | 8.09e-09 | 47 |
future brain | 8.09e-09 | 47 |
neural tube | 1.67e-08 | 52 |
neural rod | 1.67e-08 | 52 |
future spinal cord | 1.67e-08 | 52 |
neural keel | 1.67e-08 | 52 |
brain grey matter | 1.92e-08 | 29 |
regional part of telencephalon | 1.92e-08 | 29 |
telencephalon | 1.92e-08 | 29 |
regional part of brain | 2.50e-08 | 46 |
anterior neural tube | 3.49e-08 | 40 |
organ system subdivision | 6.46e-08 | 194 |
gray matter | 7.07e-08 | 34 |
regional part of forebrain | 9.95e-08 | 39 |
forebrain | 9.95e-08 | 39 |
future forebrain | 9.95e-08 | 39 |
germ layer | 4.81e-07 | 291 |
germ layer / neural crest | 4.81e-07 | 291 |
embryonic tissue | 4.81e-07 | 291 |
presumptive structure | 4.81e-07 | 291 |
germ layer / neural crest derived structure | 4.81e-07 | 291 |
epiblast (generic) | 4.81e-07 | 291 |