Personal tools

FFCP PHASE1:Mm9::chrX:45245679..45245702,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(4 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=93761
|EntrezGene=93761
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q6PGB8
|UniProt=Q6PGB8
|association_with_transcript=0bp_to_ENSMUST00000077569,ENSMUST00000101616_5end
|association_with_transcript=0bp_to_ENSMUST00000077569,ENSMUST00000101616_5end
|cluster_id=chrX:45245679..45245702,-
|description=CAGE_peak_1_at_Smarca1_5end
|description=CAGE_peak_1_at_Smarca1_5end
|id=chrX:45245679..45245702,-
|id=chrX:45245679..45245702,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000468!2.51e-10!333;UBERON:0000991!2.75e-09!18;UBERON:0005564!2.75e-09!18;UBERON:0004176!1.07e-08!17;UBERON:0009196!1.07e-08!17;UBERON:0009117!1.07e-08!17;UBERON:0000922!1.21e-08!328;UBERON:0003886!1.65e-08!38;UBERON:0002323!3.00e-08!37;UBERON:0004458!3.00e-08!37;UBERON:0002553!8.48e-08!39;UBERON:0003133!1.06e-07!24;UBERON:0003135!2.22e-07!15;UBERON:0000473!3.72e-07!14;UBERON:0005156!7.51e-07!26;UBERON:0000990!7.51e-07!26
|ontology_enrichment_uberon_v019_2=UBERON:0000991,1.50e-09,18;UBERON:0005564,1.50e-09,18;UBERON:0004176,6.13e-09,17;UBERON:0009196,6.13e-09,17;UBERON:0009117,6.13e-09,17;UBERON:0003886,2.22e-08,38;UBERON:0002323,4.09e-08,37;UBERON:0004458,4.09e-08,37;UBERON:0003133,8.77e-08,24;UBERON:0002553,9.19e-08,39;UBERON:0003135,1.41e-07,15;UBERON:0000473,2.40e-07,14;UBERON:0000922,7.60e-07,320;UBERON:0005156,9.40e-07,26;UBERON:0000990,9.40e-07,26
|phase1_expression=10.4096750618116,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0,0,0.194429899074283,1.53985063787899,0,0,0,0,1.02903774414379,0.85960031981627,4.64104883049698,2.83243045203437,5.28990979272033,4.43681982454325,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,0.768436610643109,2.38486108309499,1.62007125998029,2.10324961351382,2.57085885963423,3.53389665522582,3.06226998037385,2.30029130443767,1.83843757322004,5.50579404996943,1.53224805702225,3.07213066512487,5.40733779693795,3.93396867490361,5.73004707612436,1.95428099300967,5.06486349028512,5.95913166329559,10.3120004915784,8.54230084794618,6.71038004971082,0.075726193333184,0,0.579728977403356,0,0,0,0,0,1.82577746171277,0,0,0,11.6900038414645,0,0,0,0,0,0,1.37020655662872,0.258937883647172,31.1728492036132,14.7462527751215,18.8768596553528,13.1450833435953,16.8809357418937,19.1669592631199,29.4059823711441,16.5620628382031,0.86759614151947,0.884610551949874,6.14714029800155,2.65009822152472,1.93950101254089,1.86391761218122,2.63502717310392,3.97948742945565,0.510914110417183,0.11981512450592,0,0,4.34392854273986,10.5225138648284,14.5759048450923,4.86708096538374,4.85859368927628,4.57133698031032,8.4365456795234,22.5064994109199,5.349499736234,11.3725241295154,0.841767423545896,14.8337304977482,9.19608417733892,8.64298223065676,10.5493372485001,6.05524842446818,5.76511741281824,6.27801554550183,3.10444044886819,12.0718076042392,29.5005485061798,29.0319354870516,19.2892244536266,29.751055667139,13.2335823278423,13.5816210029243,27.2676945541336,0,0,0,17.1914391204467,19.9347150983932,17.1058958387964,13.9679393995274,11.4123254413494,14.0383072727514,11.39416329277,5.09719462659276,9.22446204700639,4.11399624783701,1.31333971263276,0.972825714550269,1.60819986167866,0.878200461164203,1.47627060636409,2.94405927989778,7.61494131606705,0,0.264450566663544,25.5945900642281,31.8164240448801,23.1961430379768,13.5127961497639,16.2335972006755,15.7887269673424,0.949058123089023,10.0466362381647,4.02136334080431,7.36138946552258,2.53453313254856,0,1.08069024937347,0.796565093017469,3.03468641524931,15.5377977149231,14.6520056375005,14.255592949172,16.0980564349129,8.6968416663995,6.32365371242573,1.32849133181642,0.784993639206874,0.246794327843601,0,9.17648081438517,11.4004217165658,6.97072548393047,8.72298521970563,7.23531479257251,4.32863948028414,2.87696137450811,1.78348749452539,1.64736847912849,4.31304619582064,0.744281895337007,1.5601883655728,0.252578877947112,0,0,0.369506380333209,21.4125295300648,16.1335326677606,20.8786455503481,17.3670783733492,15.2430694272052,9.75978927632656,2.92700471786698,8.35466263762812,4.20782910332672,4.78364305972461,1.47476983244164,1.20879487306127,0.867894351489069,0,0,0.491764273019036,0.551873492609465,3.37156238974363,3.5163505977661,1.14754461763673,1.76729649043061,4.41711507182759,1.56175497718655,4.52389135238878,2.38968797952552,1.55959071857676,3.39691836946599,5.26253912177363,2.92255857911312,3.55759000151871,3.21321316421807,98.3644790493302,14.9575107080494,19.220661203722,2.47455184458803,0,26.705869977048,21.1626489875326,51.1119766138484,45.1811896107582,59.6424187011219,58.9216508423544,15.6319503675327,7.12994756769443,3.47640433729398,0,2.06271086496374,9.87274856685985,15.4852540866927,6.72665155670323,16.289614662401,17.5566831305851,15.5180871313801,17.1130981426206,5.78483403317739,4.92810586933792,3.1774810629573,0.441056796109924,0.32977250588296,6.13564821444441,2.0506394475573,2.38744688006273,0.820704498725306,1.1659233465194,2.78137953015765,0.341741761595705,19.1939787205797,16.8527019906438,0.565105371014073,0.136694227721025,0,0.169978429993855,0.139951452323658,0.552799895217695,1.90934123603023,21.0363435731455,18.7053909756701,17.8208812355972,14.6361807210128,12.6650286972783,6.87808166562586,5.37247462214684,2.6175594198403,0.518459893167171,0,9.58277995763124,45.6025465434135,24.8187735685646,35.9734698436488,29.7067593998782,46.2939783844732,39.6667466622648,23.566993656755,41.0000036704529,23.9168279617746,16.1296803504405,0.948033361884535,6.48720688928525,5.34096977257102,3.37794139742267,1.9692936523423,1.78813219303138,0.240390899039938,0.147689527174577,0.302899349844443,0.304827226619999,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,0.965947970160952,5.06742683718191,2.38097111547445,0.214368379079066,1.50471631210609,8.471277639256,9.20650473014354,7.44764167471216,6.01486138202907,1.37016503954128,4.5323633843382,4.72515750162264,3.60256962579376,3.17199686288943,6.21312374102184,17.8514237844784,7.18244772121856,18.7806966329548,11.1829089851415,15.9306003597267,11.7659845408009,8.44537565646138,8.24140228955577,10.5903339165299,8.59170519996911,10.3926512954998,11.5062068245506,7.95952813494,9.21962194630118,8.32814299856392,8.57328644309533,8.34367146802959,6.55891349576597,8.65380391686944,12.0703114510206,12.0004238334895,10.4710725634009,10.0143199777875,9.30217066446903,8.94039113945641,9.39222147597609,10.9756783723664,9.73357932320019,9.2346797415186,8.97827634652382,10.914421667424,7.68334962529395,4.50154147486658,7.7468420592983,12.346023102793,10.2422336954558,9.59119594626174,8.16510005383534,4.01705497344571,2.20591419119516,5.79669589051054
|phase1_expression=10.4096750618116,0,0,0,0,0.16787927191189,0.467225281191051,0,0,0,0,0,0,0,0,0,0,0,0,0,4.33720779770456,0,0,0,0,0,0,0.430942465371778,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0,0,0.782391344348039,0,0,0.194429899074283,1.53985063787899,0,0,0,0,1.02903774414379,0.85960031981627,4.64104883049698,2.83243045203437,5.28990979272033,4.43681982454325,0.338844532069132,0.889294796111139,0,0,0,1.19840044207362,0.768436610643109,2.38486108309499,1.62007125998029,2.10324961351382,2.57085885963423,3.53389665522582,3.06226998037385,2.30029130443767,1.83843757322004,5.50579404996943,1.53224805702225,3.07213066512487,5.40733779693795,3.93396867490361,5.73004707612436,1.95428099300967,5.06486349028512,5.95913166329559,10.3120004915784,8.54230084794618,6.71038004971082,0.075726193333184,0,0.579728977403356,0,0,0,0,0,1.82577746171277,0,0,0,11.6900038414645,0,0,0,0,0,0,1.37020655662872,0.258937883647172,31.1728492036132,14.7462527751215,18.8768596553528,13.1450833435953,16.8809357418937,19.1669592631199,29.4059823711441,16.5620628382031,0.86759614151947,0.884610551949874,6.14714029800155,2.65009822152472,1.93950101254089,1.86391761218122,2.63502717310392,3.97948742945565,0.510914110417183,0.11981512450592,0,0,4.34392854273986,10.5225138648284,14.5759048450923,4.86708096538374,4.85859368927628,4.57133698031032,8.4365456795234,22.5064994109199,5.349499736234,11.3725241295154,0.841767423545896,14.8337304977482,9.19608417733892,8.64298223065676,10.5493372485001,6.05524842446818,5.76511741281824,6.27801554550183,3.10444044886819,12.0718076042392,29.5005485061798,29.0319354870516,19.2892244536266,29.751055667139,13.2335823278423,13.5816210029243,27.2676945541336,0,0,0,17.1914391204467,19.9347150983932,17.1058958387964,13.9679393995274,11.4123254413494,14.0383072727514,11.39416329277,5.09719462659276,9.22446204700639,4.11399624783701,1.31333971263276,0.972825714550269,1.60819986167866,0.878200461164203,1.47627060636409,2.94405927989778,7.61494131606705,0,0.264450566663544,25.5945900642281,31.8164240448801,23.1961430379768,13.5127961497639,16.2335972006755,15.7887269673424,0.949058123089023,10.0466362381647,4.02136334080431,7.36138946552258,2.53453313254856,0,1.08069024937347,0.796565093017469,3.03468641524931,15.5377977149231,14.6520056375005,14.255592949172,16.0980564349129,8.6968416663995,6.32365371242573,1.32849133181642,0.784993639206874,0.246794327843601,0,9.17648081438517,11.4004217165658,6.97072548393047,8.72298521970563,7.23531479257251,4.32863948028414,2.87696137450811,1.78348749452539,1.64736847912849,4.31304619582064,0.744281895337007,1.5601883655728,0.252578877947112,0,0,0.369506380333209,21.4125295300648,16.1335326677606,20.8786455503481,17.3670783733492,15.2430694272052,9.75978927632656,2.92700471786698,8.35466263762812,4.20782910332672,4.78364305972461,1.47476983244164,1.20879487306127,0.867894351489069,0,0,0.491764273019036,0.551873492609465,3.37156238974363,3.5163505977661,1.14754461763673,1.76729649043061,4.41711507182759,1.56175497718655,4.52389135238878,2.38968797952552,1.55959071857676,3.39691836946599,5.26253912177363,2.92255857911312,3.55759000151871,3.21321316421807,98.3644790493302,14.9575107080494,19.220661203722,2.47455184458803,0,26.705869977048,21.1626489875326,51.1119766138484,45.1811896107582,59.6424187011219,58.9216508423544,15.6319503675327,7.12994756769443,3.47640433729398,0,2.06271086496374,9.87274856685985,15.4852540866927,6.72665155670323,16.289614662401,17.5566831305851,15.5180871313801,17.1130981426206,5.78483403317739,4.92810586933792,3.1774810629573,0.441056796109924,0.32977250588296,6.13564821444441,2.0506394475573,2.38744688006273,0.820704498725306,1.1659233465194,2.78137953015765,0.341741761595705,19.1939787205797,16.8527019906438,0.565105371014073,0.136694227721025,0,0.169978429993855,0.139951452323658,0.552799895217695,1.90934123603023,21.0363435731455,18.7053909756701,17.8208812355972,14.6361807210128,12.6650286972783,6.87808166562586,5.37247462214684,2.6175594198403,0.518459893167171,0,9.58277995763124,45.6025465434135,24.8187735685646,35.9734698436488,29.7067593998782,46.2939783844732,39.6667466622648,23.566993656755,41.0000036704529,23.9168279617746,16.1296803504405,0.948033361884535,6.48720688928525,5.34096977257102,3.37794139742267,1.9692936523423,1.78813219303138,0.240390899039938,0.147689527174577,0.302899349844443,0.304827226619999,0,0.194915761479505,0.0962118416403295,0.116876902181569,0.680191150845634,0,0,0,0.965947970160952,5.06742683718191,2.38097111547445,0.214368379079066,1.50471631210609,8.471277639256,9.20650473014354,7.44764167471216,6.01486138202907,1.37016503954128,4.5323633843382,4.72515750162264,3.60256962579376,3.17199686288943,6.21312374102184,17.8514237844784,7.18244772121856,18.7806966329548,11.1829089851415,15.9306003597267,11.7659845408009,8.44537565646138,8.24140228955577,10.5903339165299,8.59170519996911,10.3926512954998,11.5062068245506,7.95952813494,9.21962194630118,8.32814299856392,8.57328644309533,8.34367146802959,6.55891349576597,8.65380391686944,12.0703114510206,12.0004238334895,10.4710725634009,10.0143199777875,9.30217066446903,8.94039113945641,9.39222147597609,10.9756783723664,9.73357932320019,9.2346797415186,8.97827634652382,10.914421667424,7.68334962529395,4.50154147486658,7.7468420592983,12.346023102793,10.2422336954558,9.59119594626174,8.16510005383534,4.01705497344571,2.20591419119516,5.79669589051054
|short_description=p1@Smarca1
|short_description=p1@Smarca1
}}
}}

Latest revision as of 20:55, 1 October 2015

Short description:p1@Smarca1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smarca1_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_ENSMUST00000077569, ENSMUST00000101616_5end
EntrezGene:Smarca1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Smarca1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G710.41
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A34.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C11.03
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C32.83
Mouse Granule cells, donor2.CNhs12357.11731-123E35.29
Mouse Granule cells, donor3.CNhs12108.11636-122C74.44
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.20
Mouse Microglia, donor2.CNhs12634.11736-123E80.77
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.38
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.62
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D92.10
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.53
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.06
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.30
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D35.51
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.53
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.07
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.93
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.95
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E55.06
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.96
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D610.31
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.54
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E16.71
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G611.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.37
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D731.17
adrenal gland, embryo E14.CNhs11038.406-44C514.75
adrenal gland, embryo E16.CNhs11004.1254-43D618.88
adrenal gland, embryo E17.CNhs11043.1263-45I113.15
adrenal gland, embryo E18.CNhs11026.1262-18F516.88
adrenal gland, neonate N00.CNhs11191.1311-23C119.17
adrenal gland, neonate N25.CNhs11223.1377-27I329.41
amnion, adult pregnant day17.5.CNhs10488.583-22A816.56
aorta, adult.CNhs10498.46-23H10.87
bone (os femoris), adult.CNhs10483.56-12G20.88
bone (os femoris), neonate N02.CNhs11227.1985-43F56.15
bone (os femoris), neonate N16.CNhs11225.1525-43A62.65
bone (os femoris), neonate N20.CNhs11195.1350-25C31.94
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B22.64
cerebellum, neonate N30.CNhs11135.1395-42I23.98
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.12
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A44.34
corpus striatum, adult.CNhs10487.19-21D810.52
corpus striatum, neonate N00.CNhs11226.630-43F114.58
cortex, adult.CNhs10473.12-14D54.87
cortex, neonate N30.CNhs11107.1392-42F24.86
diencephalon, adult.CNhs10482.20-12F24.57
diencephalon, neonate N30.CNhs11201.1388-42B28.44
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B122.51
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B211.37
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C614.83
eyeball, embryo E14.CNhs10521.399-16E29.20
eyeball, embryo E15.CNhs10593.426-16C98.64
eyeball, embryo E17.CNhs11023.1261-18D410.55
eyeball, neonate N00.CNhs11207.633-15C66.06
eyeball, neonate N01.CNhs11140.1532-43E75.77
eyeball, neonate N02.CNhs11205.1551-44G86.28
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E212.07
forelimb, embryo E12.CNhs10600.359-14H229.50
forelimb, embryo E13.CNhs10589.384-1E229.03
forelimb, embryo E14.CNhs10577.413-26A819.29
forelimb, embryo E15.CNhs11007.437-20E729.75
forelimb, embryo E17.CNhs10598.1517-43C413.23
forelimb, embryo E18.CNhs11008.1520-43B513.58
gonad, embryo E13.CNhs11044.1564-45I627.27
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E917.19
heart, embryo E12.CNhs11015.353-12F519.93
heart, embryo E13.CNhs11013.376-3I917.11
heart, embryo E14.CNhs10597.403-26D413.97
heart, embryo E15.CNhs11017.431-16C811.41
heart, embryo E16.CNhs11021.457-17C614.04
heart, embryo E17.CNhs11025.479-18E511.39
heart, embryo E18.CNhs11030.1283-20G35.10
heart, neonate N00.CNhs11213.639-21E39.22
heart, neonate N03.CNhs11221.1349-25I24.11
heart, neonate N10.CNhs11118.749-24G11.31
heart, neonate N16.CNhs11209.782-15G10.97
heart, neonate N20.CNhs11127.821-26I61.61
heart, neonate N25.CNhs11196.1351-25D30.88
heart, neonate N30.CNhs11202.1390-42D21.48
hippocampus, adult.CNhs10478.13-16E82.94
hippocampus, neonate N00.CNhs11228.627-43G17.61
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I525.59
intestine, embryo E13.CNhs11010.381-16D531.82
intestine, embryo E15.CNhs10602.976-16D823.20
intestine, embryo E16.CNhs10585.463-22H413.51
intestine, embryo E17.CNhs10582.482-18D316.23
intestine, embryo E18.CNhs10526.1289-20F715.79
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E910.05
intestine, neonate N06.CNhs11102.688-20B84.02
intestine, neonate N07.CNhs11095.720-20F27.36
intestine, neonate N10.CNhs11098.755-23A52.53
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E31.08
intestine, neonate N30.CNhs11131.1384-42G10.80
kidney, embryo E14.CNhs10606.411-4I93.03
kidney, embryo E15.CNhs10997.434-16F815.54
kidney, embryo E16.CNhs10584.464-22A514.65
kidney, embryo E17.CNhs11028.483-18I214.26
kidney, embryo E18.CNhs11001.1288-20C716.10
kidney, neonate N00.CNhs11214.646-21G78.70
kidney, neonate N10.CNhs11206.758-6D56.32
kidney, neonate N20.CNhs11113.832-19I11.33
kidney, neonate N25.CNhs11122.1353-25F30.78
kidney, neonate N30.CNhs11203.1385-42H10.25
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F89.18
liver, embryo E13.CNhs10524.378-3H611.40
liver, embryo E14.CNhs10594.409-16E16.97
liver, embryo E15.CNhs10520.433-16D78.72
liver, embryo E16.CNhs10523.462-17F57.24
liver, embryo E17.CNhs10510.481-18A34.33
liver, embryo E18.CNhs10579.499-43G42.88
liver, neonate N00.CNhs11117.641-24F41.78
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H20.74
liver, neonate N10.CNhs11115.751-24B91.56
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G221.41
lung, embryo E14.CNhs10604.404-26F816.13
lung, embryo E15.CNhs11020.432-17C520.88
lung, embryo E16.CNhs10998.458-17B617.37
lung, embryo E17.CNhs10605.480-44A615.24
lung, embryo E18.CNhs10583.1287-20I69.76
lung, neonate N00.CNhs11224.640-42C62.93
lung, neonate N06.CNhs11212.683-20E58.35
lung, neonate N07.CNhs11111.715-19A34.21
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A41.47
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.49
mammary gland, adult pregnant day19.CNhs10476.588-5H20.55
medulla oblongata, adult.CNhs10477.17-12C23.37
medulla oblongata, neonate N30.CNhs11200.1396-42A33.52
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C71.15
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.77
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E14.42
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.56
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E34.52
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.39
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.56
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D93.40
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.92
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D63.56
olfactory brain, adult.CNhs10489.18-22I93.21
ovary, adult.CNhs10507.91-2I798.36
ovary, embryo E18.CNhs11040.505-44H714.96
ovary, neonate N00.CNhs11217.1299-22I419.22
oviduct, adult pregnant day01.CNhs10500.988-6G62.47
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F426.71
pancreas, embryo E15.CNhs11042.1556-45F221.16
pancreas, embryo E16.CNhs11003.460-26E551.11
pancreas, embryo E17.CNhs10599.1558-45G345.18
pancreas, embryo E18.CNhs10580.1535-43I759.64
pancreas, neonate N00.CNhs11105.645-26G958.92
pancreas, neonate N01.CNhs11138.1531-43D715.63
pancreas, neonate N02.CNhs11139.1539-43D87.13
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G89.87
pituitary gland, embryo E12.CNhs11018.346-16E615.49
pituitary gland, embryo E13.CNhs11009.370-44C76.73
pituitary gland, embryo E14.CNhs11037.398-44A516.29
pituitary gland, embryo E15.CNhs10592.427-16B917.56
pituitary gland, embryo E16.CNhs11036.449-43F615.52
pituitary gland, embryo E17.CNhs11039.1265-44F517.11
pituitary gland, neonate N00.CNhs11190.1308-22E95.78
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G33.18
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.33
skin, neonate N00.CNhs11124.650-25G46.14
skin, neonate N03.CNhs11215.662-22H32.05
skin, neonate N06.CNhs11097.693-20I52.39
skin, neonate N10.CNhs11108.762-6C40.82
small intestine, neonate N16.CNhs11114.790-21I11.17
spinal cord, adult.CNhs10505.24-13C92.78
spleen, adult.CNhs10465.25-2G20.34
spleen, embryo E16.CNhs11035.461-43C119.19
spleen, embryo E18.CNhs11011.1271-21F216.85
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H61.91
stomach, embryo E12.CNhs10588.356-43E321.04
stomach, embryo E15.CNhs10603.1252-16G818.71
stomach, embryo E16.CNhs11022.459-17D417.82
stomach, embryo E17.CNhs11006.1035-18D514.64
stomach, embryo E18.CNhs10999.1286-20C612.67
stomach, neonate N03.CNhs11193.1340-24B86.88
stomach, neonate N07.CNhs11210.718-18A95.37
stomach, neonate N25.CNhs11104.1355-25E42.62
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G59.58
testis, embryo E13.CNhs11031.389-23F545.60
testis, embryo E15.CNhs11034.443-27C524.82
testis, embryo E16.CNhs11033.470-26G535.97
testis, embryo E17.CNhs11029.486-18I529.71
testis, embryo E18.CNhs11027.503-18G546.29
testis, neonate N00.CNhs11189.1300-22B739.67
testis, neonate N07.CNhs11222.726-26I423.57
testis, neonate N10.CNhs11204.763-44D941.00
testis, neonate N20.CNhs11110.839-18H323.92
testis, neonate N30.CNhs11130.1391-42E216.13
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I46.49
thymus, embryo E15.CNhs11005.430-45I25.34
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C11.97
thymus, embryo E18.CNhs10595.1273-19G41.79
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.30
thymus, neonate N07.CNhs11211.713-19D30.30
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.19
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.12
tongue, adult.CNhs10499.32-1B40.68
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F55.07
uterus, adult.CNhs10509.92-27E52.38
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.50
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A18.47
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A29.21
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A37.45
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.01
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A54.53
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A64.73
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A73.60
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A83.17
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.21
whole body, embryo E11.CNhs11014.324-5I817.85
whole body, embryo E12.CNhs10587.857-27C97.18
whole body, embryo E13.CNhs10512.372-23H218.78
whole body, embryo E14.5.CNhs10578.420-27D211.18
whole body, embryo E14.CNhs10519.395-14B115.93
whole body, embryo E16.CNhs10514.453-14F211.77
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G510.59
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G58.59
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.39
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G511.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.96
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G59.22
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G58.33
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G58.57
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G58.34
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G56.56
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.07
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G510.47
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.01
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G59.30
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G58.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.98
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G59.73
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.23
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.98
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G57.68
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G57.75
whole body, embryo E17.5.CNhs10513.490-9F912.35
whole body, embryo E17.CNhs10517.475-3I510.24
whole body, embryo E18.CNhs10516.493-3B39.59
whole body, neonate N00.CNhs10525.657-19C28.17
whole body, neonate N01.CNhs10576.659-23C64.02
whole body, neonate N06.CNhs10515.692-21D12.21
whole body, neonate N10.CNhs10518.761-6B45.80





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
gonad1.50e-0918
gonad primordium1.50e-0918
external genitalia6.13e-0917
indifferent external genitalia6.13e-0917
indifferent gonad6.13e-0917
body cavity precursor2.22e-0838
body cavity4.09e-0837
body cavity or lining4.09e-0837
reproductive organ8.77e-0824
anatomical cavity9.19e-0839
male reproductive organ1.41e-0715
testis2.40e-0714
embryo7.60e-07320
reproductive structure9.40e-0726
reproductive system9.40e-0726
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chrX:45245679..45245702,-&oldid=4321884"