FFCP PHASE1:Mm9::chrX:160346914..160346925,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=108012 | |EntrezGene=108012 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=208 | |||
|TSSclassifier=NA | |||
|UniProt=Q9DB50 | |UniProt=Q9DB50 | ||
|association_with_transcript=-23bp_to_ENSMUST00000069041_5end | |association_with_transcript=-23bp_to_ENSMUST00000069041_5end | ||
|cluster_id=chrX:160346914..160346925,+ | |||
|description=CAGE_peak_3_at_Ap1s2_5end | |description=CAGE_peak_3_at_Ap1s2_5end | ||
|id=chrX:160346914..160346925,+ | |id=chrX:160346914..160346925,+ | ||
|ontology_enrichment_celltype=CL:0000117!2.30e-14!23;CL:0000337!2.30e-14!23;CL:0000540!8.23e-12!33;CL:0000047!8.23e-12!33;CL:0000031!8.23e-12!33;CL:0000404!8.23e-12!33;CL:0002319!1.43e-09!43;CL:0000393!2.38e-09!39;CL:0000211!2.38e-09!39;CL:0000221!4.51e-09!44;CL:0000133!4.51e-09!44;CL:0000055!6.91e-08!50 | |ontology_enrichment_celltype=CL:0000117!2.30e-14!23;CL:0000337!2.30e-14!23;CL:0000540!8.23e-12!33;CL:0000047!8.23e-12!33;CL:0000031!8.23e-12!33;CL:0000404!8.23e-12!33;CL:0002319!1.43e-09!43;CL:0000393!2.38e-09!39;CL:0000211!2.38e-09!39;CL:0000221!4.51e-09!44;CL:0000133!4.51e-09!44;CL:0000055!6.91e-08!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.02e-19,23;CL:0000337,4.02e-19,23;CL:0000540,4.67e-14,33;CL:0000047,4.67e-14,33;CL:0000031,4.67e-14,33;CL:0000404,4.67e-14,33;CL:0000393,2.96e-12,39;CL:0000211,2.96e-12,39;CL:0002319,6.13e-10,43;CL:0000221,1.79e-09,44;CL:0000133,1.79e-09,44 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!8.44e-18!75;UBERON:0001016!8.44e-18!75;UBERON:0001017!1.10e-17!73;UBERON:0005743!1.10e-17!73;UBERON:0001049!4.26e-15!52;UBERON:0005068!4.26e-15!52;UBERON:0006241!4.26e-15!52;UBERON:0007135!4.26e-15!52;UBERON:0004121!4.27e-15!102;UBERON:0000924!4.27e-15!102;UBERON:0006601!4.27e-15!102;UBERON:0002346!5.81e-15!71;UBERON:0003075!5.81e-15!71;UBERON:0007284!5.81e-15!71;UBERON:0000033!3.56e-14!63;UBERON:0000955!5.45e-14!50;UBERON:0006238!5.45e-14!50;UBERON:0002616!1.49e-13!49;UBERON:0003056!1.66e-13!49;UBERON:0007811!4.28e-11!86;UBERON:0003080!4.39e-11!40;UBERON:0002020!7.93e-11!34;UBERON:0002780!1.73e-10!39;UBERON:0001890!1.73e-10!39;UBERON:0006240!1.73e-10!39;UBERON:0000153!2.63e-09!94;UBERON:0002791!3.49e-08!29;UBERON:0003528!3.49e-08!29;UBERON:0001893!3.49e-08!29 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,9.12e-21,64;UBERON:0003075,9.12e-21,64;UBERON:0007284,9.12e-21,64;UBERON:0000073,1.74e-20,54;UBERON:0001017,2.81e-20,73;UBERON:0001016,3.50e-20,75;UBERON:0001049,9.54e-19,52;UBERON:0005068,9.54e-19,52;UBERON:0006241,9.54e-19,52;UBERON:0007135,9.54e-19,52;UBERON:0004121,3.77e-18,95;UBERON:0000924,3.77e-18,95;UBERON:0006601,3.77e-18,95;UBERON:0003056,7.44e-17,49;UBERON:0010371,7.40e-16,73;UBERON:0000955,8.57e-15,47;UBERON:0006238,8.57e-15,47;UBERON:0002616,3.14e-14,46;UBERON:0003080,6.56e-14,40;UBERON:0002020,7.91e-14,34;UBERON:0002780,4.14e-13,39;UBERON:0001890,4.14e-13,39;UBERON:0006240,4.14e-13,39;UBERON:0010314,8.69e-11,92;UBERON:0003528,3.02e-10,29;UBERON:0002791,3.02e-10,29;UBERON:0001893,3.02e-10,29;UBERON:0002420,5.73e-08,8;UBERON:0007245,5.73e-08,8;UBERON:0010009,5.73e-08,8;UBERON:0010011,5.73e-08,8;UBERON:0000454,5.73e-08,8 | |||
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| ||
|short_description=p3@Ap1s2 | |short_description=p3@Ap1s2 | ||
}} | }} |
Latest revision as of 18:02, 1 October 2015
Short description: | p3@Ap1s2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Ap1s2_5end |
Coexpression cluster: | MCL_coexpression_mm9:208 |
Association with transcript: | -23bp_to_ENSMUST00000069041_5end |
EntrezGene: | Ap1s2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.02e-19 | 23 |
neuroblast (sensu Vertebrata) | 4.02e-19 | 23 |
neuron | 4.67e-14 | 33 |
neuronal stem cell | 4.67e-14 | 33 |
neuroblast | 4.67e-14 | 33 |
electrically signaling cell | 4.67e-14 | 33 |
electrically responsive cell | 2.96e-12 | 39 |
electrically active cell | 2.96e-12 | 39 |
neural cell | 6.13e-10 | 43 |
ectodermal cell | 1.79e-09 | 44 |
neurectodermal cell | 1.79e-09 | 44 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 9.12e-21 | 64 |
neural plate | 9.12e-21 | 64 |
presumptive neural plate | 9.12e-21 | 64 |
regional part of nervous system | 1.74e-20 | 54 |
central nervous system | 2.81e-20 | 73 |
nervous system | 3.50e-20 | 75 |
neural tube | 9.54e-19 | 52 |
neural rod | 9.54e-19 | 52 |
future spinal cord | 9.54e-19 | 52 |
neural keel | 9.54e-19 | 52 |
ectoderm-derived structure | 3.77e-18 | 95 |
ectoderm | 3.77e-18 | 95 |
presumptive ectoderm | 3.77e-18 | 95 |
pre-chordal neural plate | 7.44e-17 | 49 |
ecto-epithelium | 7.40e-16 | 73 |
brain | 8.57e-15 | 47 |
future brain | 8.57e-15 | 47 |
regional part of brain | 3.14e-14 | 46 |
anterior neural tube | 6.56e-14 | 40 |
gray matter | 7.91e-14 | 34 |
regional part of forebrain | 4.14e-13 | 39 |
forebrain | 4.14e-13 | 39 |
future forebrain | 4.14e-13 | 39 |
structure with developmental contribution from neural crest | 8.69e-11 | 92 |
brain grey matter | 3.02e-10 | 29 |
regional part of telencephalon | 3.02e-10 | 29 |
telencephalon | 3.02e-10 | 29 |
basal ganglion | 5.73e-08 | 8 |
nuclear complex of neuraxis | 5.73e-08 | 8 |
aggregate regional part of brain | 5.73e-08 | 8 |
collection of basal ganglia | 5.73e-08 | 8 |
cerebral subcortex | 5.73e-08 | 8 |