FFCP PHASE1:Mm9::chrX:150266779..150266824,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=278240 | |EntrezGene=278240 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=B1AXT5 | |UniProt=B1AXT5 | ||
|association_with_transcript=0bp_to_ENSMUST00000123264_5end | |association_with_transcript=0bp_to_ENSMUST00000123264_5end | ||
|cluster_id=chrX:150266779..150266824,+ | |||
|description=CAGE_peak_1_at_Spin2_5end | |description=CAGE_peak_1_at_Spin2_5end | ||
|id=chrX:150266779..150266824,+ | |id=chrX:150266779..150266824,+ | ||
|ontology_enrichment_celltype=CL:0000117!1.91e-09!23;CL:0000337!1.91e-09!23;CL:0000540!3.64e-09!33;CL:0000047!3.64e-09!33;CL:0000031!3.64e-09!33;CL:0000404!3.64e-09!33;CL:0000393!1.55e-08!39;CL:0000211!1.55e-08!39 | |ontology_enrichment_celltype=CL:0000117!1.91e-09!23;CL:0000337!1.91e-09!23;CL:0000540!3.64e-09!33;CL:0000047!3.64e-09!33;CL:0000031!3.64e-09!33;CL:0000404!3.64e-09!33;CL:0000393!1.55e-08!39;CL:0000211!1.55e-08!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,1.13e-09,23;CL:0000337,1.13e-09,23;CL:0000540,3.45e-09,33;CL:0000047,3.45e-09,33;CL:0000031,3.45e-09,33;CL:0000404,3.45e-09,33;CL:0000393,1.45e-08,39;CL:0000211,1.45e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.10e-16!73;UBERON:0005743!2.10e-16!73;UBERON:0002346!1.16e-15!71;UBERON:0003075!1.16e-15!71;UBERON:0007284!1.16e-15!71;UBERON:0001049!1.41e-15!52;UBERON:0005068!1.41e-15!52;UBERON:0006241!1.41e-15!52;UBERON:0007135!1.41e-15!52;UBERON:0000073!2.78e-15!75;UBERON:0001016!2.78e-15!75;UBERON:0000955!1.03e-14!50;UBERON:0006238!1.03e-14!50;UBERON:0000033!1.91e-14!63;UBERON:0002616!2.06e-14!49;UBERON:0003056!1.67e-13!49;UBERON:0003080!6.45e-13!40;UBERON:0004121!1.37e-12!102;UBERON:0000924!1.37e-12!102;UBERON:0006601!1.37e-12!102;UBERON:0002780!2.82e-12!39;UBERON:0001890!2.82e-12!39;UBERON:0006240!2.82e-12!39;UBERON:0002020!5.13e-12!34;UBERON:0000153!1.96e-11!94;UBERON:0002791!2.22e-10!29;UBERON:0003528!2.22e-10!29;UBERON:0001893!2.22e-10!29;UBERON:0007811!1.50e-08!86;UBERON:0000468!2.21e-08!333;UBERON:0000922!2.38e-07!328;UBERON:0000956!3.96e-07!21;UBERON:0001869!3.96e-07!21;UBERON:0000203!3.96e-07!21;UBERON:0000025!9.24e-07!114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.00e-16,64;UBERON:0003075,1.00e-16,64;UBERON:0007284,1.00e-16,64;UBERON:0001017,1.20e-16,73;UBERON:0000073,1.94e-16,54;UBERON:0001049,8.11e-16,52;UBERON:0005068,8.11e-16,52;UBERON:0006241,8.11e-16,52;UBERON:0007135,8.11e-16,52;UBERON:0001016,2.98e-15,75;UBERON:0010371,2.81e-14,73;UBERON:0000955,7.89e-14,47;UBERON:0006238,7.89e-14,47;UBERON:0003056,1.18e-13,49;UBERON:0002616,1.59e-13,46;UBERON:0003080,4.46e-13,40;UBERON:0004121,8.45e-13,95;UBERON:0000924,8.45e-13,95;UBERON:0006601,8.45e-13,95;UBERON:0002780,2.02e-12,39;UBERON:0001890,2.02e-12,39;UBERON:0006240,2.02e-12,39;UBERON:0002020,3.81e-12,34;UBERON:0010314,2.88e-11,92;UBERON:0003528,1.83e-10,29;UBERON:0002791,1.83e-10,29;UBERON:0001893,1.83e-10,29;UBERON:0000956,3.93e-07,21;UBERON:0001869,3.93e-07,21;UBERON:0000203,3.93e-07,21 | |||
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| ||
|short_description=p1@Spin2 | |short_description=p1@Spin2 | ||
}} | }} |
Latest revision as of 17:01, 1 October 2015
Short description: | p1@Spin2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Spin2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000123264_5end |
EntrezGene: | Spin2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 1.13e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.13e-09 | 23 |
neuron | 3.45e-09 | 33 |
neuronal stem cell | 3.45e-09 | 33 |
neuroblast | 3.45e-09 | 33 |
electrically signaling cell | 3.45e-09 | 33 |
electrically responsive cell | 1.45e-08 | 39 |
electrically active cell | 1.45e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.00e-16 | 64 |
neural plate | 1.00e-16 | 64 |
presumptive neural plate | 1.00e-16 | 64 |
central nervous system | 1.20e-16 | 73 |
regional part of nervous system | 1.94e-16 | 54 |
neural tube | 8.11e-16 | 52 |
neural rod | 8.11e-16 | 52 |
future spinal cord | 8.11e-16 | 52 |
neural keel | 8.11e-16 | 52 |
nervous system | 2.98e-15 | 75 |
ecto-epithelium | 2.81e-14 | 73 |
brain | 7.89e-14 | 47 |
future brain | 7.89e-14 | 47 |
pre-chordal neural plate | 1.18e-13 | 49 |
regional part of brain | 1.59e-13 | 46 |
anterior neural tube | 4.46e-13 | 40 |
ectoderm-derived structure | 8.45e-13 | 95 |
ectoderm | 8.45e-13 | 95 |
presumptive ectoderm | 8.45e-13 | 95 |
regional part of forebrain | 2.02e-12 | 39 |
forebrain | 2.02e-12 | 39 |
future forebrain | 2.02e-12 | 39 |
gray matter | 3.81e-12 | 34 |
structure with developmental contribution from neural crest | 2.88e-11 | 92 |
brain grey matter | 1.83e-10 | 29 |
regional part of telencephalon | 1.83e-10 | 29 |
telencephalon | 1.83e-10 | 29 |
cerebral cortex | 3.93e-07 | 21 |
cerebral hemisphere | 3.93e-07 | 21 |
pallium | 3.93e-07 | 21 |