FFCP PHASE1:Mm9::chr2:151458253..151458335,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=241727 | |EntrezGene=241727 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |||
|TSSclassifier=NA | |||
|UniProt=Q80U23 | |UniProt=Q80U23 | ||
|association_with_transcript=0bp_to_ENSMUST00000028951,ENSMUST00000094456,ENSMUST00000109875,ENSMUST00000109877,ENSMUST00000133378,ENSMUST00000141692,ENSMUST00000143367,ENSMUST00000145434,ENSMUST00000146172,ENSMUST00000148755,NM_198214,uc008ned.1,uc008nee.1,uc008nef.1,uc008neg.1_5end | |association_with_transcript=0bp_to_ENSMUST00000028951,ENSMUST00000094456,ENSMUST00000109875,ENSMUST00000109877,ENSMUST00000133378,ENSMUST00000141692,ENSMUST00000143367,ENSMUST00000145434,ENSMUST00000146172,ENSMUST00000148755,NM_198214,uc008ned.1,uc008nee.1,uc008nef.1,uc008neg.1_5end | ||
|cluster_id=chr2:151458253..151458335,- | |||
|description=CAGE_peak_1_at_Snph_5end | |description=CAGE_peak_1_at_Snph_5end | ||
|id=chr2:151458253..151458335,- | |id=chr2:151458253..151458335,- | ||
|ontology_enrichment_celltype=CL:0000221!1.03e-14!44;CL:0000133!1.03e-14!44;CL:0002319!2.43e-14!43;CL:0000540!1.29e-12!33;CL:0000047!1.29e-12!33;CL:0000031!1.29e-12!33;CL:0000404!1.29e-12!33;CL:0000117!6.85e-12!23;CL:0000337!6.85e-12!23;CL:0000055!6.10e-10!50;CL:0000393!9.20e-09!39;CL:0000211!9.20e-09!39;CL:0002321!3.70e-07!70;CL:0000220!3.70e-07!70 | |ontology_enrichment_celltype=CL:0000221!1.03e-14!44;CL:0000133!1.03e-14!44;CL:0002319!2.43e-14!43;CL:0000540!1.29e-12!33;CL:0000047!1.29e-12!33;CL:0000031!1.29e-12!33;CL:0000404!1.29e-12!33;CL:0000117!6.85e-12!23;CL:0000337!6.85e-12!23;CL:0000055!6.10e-10!50;CL:0000393!9.20e-09!39;CL:0000211!9.20e-09!39;CL:0002321!3.70e-07!70;CL:0000220!3.70e-07!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,5.52e-15,44;CL:0000133,5.52e-15,44;CL:0002319,1.38e-14,43;CL:0000540,1.72e-13,33;CL:0000047,1.72e-13,33;CL:0000031,1.72e-13,33;CL:0000404,1.72e-13,33;CL:0000117,1.05e-12,23;CL:0000337,1.05e-12,23;CL:0000393,1.88e-09,39;CL:0000211,1.88e-09,39;CL:0002321,9.33e-08,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!2.03e-33!73;UBERON:0005743!2.03e-33!73;UBERON:0000073!1.63e-32!75;UBERON:0001016!1.63e-32!75;UBERON:0004121!1.17e-27!102;UBERON:0000924!1.17e-27!102;UBERON:0006601!1.17e-27!102;UBERON:0001049!7.18e-26!52;UBERON:0005068!7.18e-26!52;UBERON:0006241!7.18e-26!52;UBERON:0007135!7.18e-26!52;UBERON:0002346!3.99e-25!71;UBERON:0003075!3.99e-25!71;UBERON:0007284!3.99e-25!71;UBERON:0000033!6.70e-25!63;UBERON:0000955!8.34e-25!50;UBERON:0006238!8.34e-25!50;UBERON:0002616!3.74e-24!49;UBERON:0003080!7.46e-20!40;UBERON:0002020!1.64e-19!34;UBERON:0002780!3.43e-19!39;UBERON:0001890!3.43e-19!39;UBERON:0006240!3.43e-19!39;UBERON:0003056!4.89e-19!49;UBERON:0002791!9.71e-17!29;UBERON:0003528!9.71e-17!29;UBERON:0001893!9.71e-17!29;UBERON:0000956!1.65e-12!21;UBERON:0001869!1.65e-12!21;UBERON:0000203!1.65e-12!21;UBERON:0002619!5.14e-11!17;UBERON:0007811!2.10e-09!86;UBERON:0002021!4.66e-08!10;UBERON:0000411!4.66e-08!10;UBERON:0001950!4.66e-08!10;UBERON:0000153!6.09e-08!94 | |ontology_enrichment_uberon=UBERON:0001017!2.03e-33!73;UBERON:0005743!2.03e-33!73;UBERON:0000073!1.63e-32!75;UBERON:0001016!1.63e-32!75;UBERON:0004121!1.17e-27!102;UBERON:0000924!1.17e-27!102;UBERON:0006601!1.17e-27!102;UBERON:0001049!7.18e-26!52;UBERON:0005068!7.18e-26!52;UBERON:0006241!7.18e-26!52;UBERON:0007135!7.18e-26!52;UBERON:0002346!3.99e-25!71;UBERON:0003075!3.99e-25!71;UBERON:0007284!3.99e-25!71;UBERON:0000033!6.70e-25!63;UBERON:0000955!8.34e-25!50;UBERON:0006238!8.34e-25!50;UBERON:0002616!3.74e-24!49;UBERON:0003080!7.46e-20!40;UBERON:0002020!1.64e-19!34;UBERON:0002780!3.43e-19!39;UBERON:0001890!3.43e-19!39;UBERON:0006240!3.43e-19!39;UBERON:0003056!4.89e-19!49;UBERON:0002791!9.71e-17!29;UBERON:0003528!9.71e-17!29;UBERON:0001893!9.71e-17!29;UBERON:0000956!1.65e-12!21;UBERON:0001869!1.65e-12!21;UBERON:0000203!1.65e-12!21;UBERON:0002619!5.14e-11!17;UBERON:0007811!2.10e-09!86;UBERON:0002021!4.66e-08!10;UBERON:0000411!4.66e-08!10;UBERON:0001950!4.66e-08!10;UBERON:0000153!6.09e-08!94 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.90e-35,73;UBERON:0001016,5.03e-34,75;UBERON:0000073,1.07e-28,54;UBERON:0004121,3.90e-28,95;UBERON:0000924,3.90e-28,95;UBERON:0006601,3.90e-28,95;UBERON:0001049,2.71e-27,52;UBERON:0005068,2.71e-27,52;UBERON:0006241,2.71e-27,52;UBERON:0007135,2.71e-27,52;UBERON:0002346,1.10e-25,64;UBERON:0003075,1.10e-25,64;UBERON:0007284,1.10e-25,64;UBERON:0000955,4.80e-24,47;UBERON:0006238,4.80e-24,47;UBERON:0002616,2.34e-23,46;UBERON:0010371,3.55e-22,73;UBERON:0003080,2.66e-21,40;UBERON:0002020,6.23e-21,34;UBERON:0002780,1.38e-20,39;UBERON:0001890,1.38e-20,39;UBERON:0006240,1.38e-20,39;UBERON:0003056,3.90e-19,49;UBERON:0003528,6.12e-18,29;UBERON:0002791,6.12e-18,29;UBERON:0001893,6.12e-18,29;UBERON:0010314,1.33e-14,92;UBERON:0000956,2.26e-13,21;UBERON:0001869,2.26e-13,21;UBERON:0000203,2.26e-13,21;UBERON:0002619,9.20e-12,17;UBERON:0002021,1.42e-08,10;UBERON:0000411,1.42e-08,10;UBERON:0001950,1.42e-08,10;UBERON:0011216,1.92e-07,194 | |||
|phase1_expression=8.48788889655408,4.53668029931169,4.54999239389536,11.4936400296595,12.5223932486587,5.20425742926858,5.37309073369709,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,28.1493290400041,0,0,3.19984845586813,3.44113921600755,1.72269589234506,4.30761996159075,4.74036711908956,13.1116159424898,13.6096270070363,2.88249663851896,0,0,0,4.33277429626912,4.15586613396231,2.6542016314108,0,0,0,0,0,0,0.251793635951155,0,0,0.782391344348039,11.7733584445441,22.1883044561817,23.1371579898397,7.8392396110203,15.8127820801469,0,0,0,0.514518872071894,0,1.54701627683233,22.0524942336962,23.8045940672415,23.4517619297286,2.71075625655306,1.77858959222228,0,0,0,10.7856039786626,19.9793518767208,7.98410014775278,7.96535036156975,9.88527318351495,42.5619966761667,44.3945767312743,9.92175473641128,9.4887016308054,10.1114066527102,95.8008164694682,111.343358810284,113.054408476595,22.2887826264028,21.1336456721566,21.3574481928272,85.7091806934239,59.0900740533264,77.9271063661731,41.2480019663135,30.8946547334053,32.4335035736023,0.757261933331841,1.36028808192214,0.579728977403356,0,0.679971333707751,0,0,0,7.16266542671934,0,0,0,9.15482228548423,0,0,0,0.216491041011214,0,0,4.45317130904334,0.258937883647172,7.57054909230606,1.56136794089522,2.43572382649713,1.61430848079241,2.26083960828934,4.11560474974967,2.13633205260448,0,0.86759614151947,1.76922110389975,1.61766849947409,0.220841518460394,1.45462575940567,5.59175283654366,64.9973369365635,68.4890731279998,13.2837668708468,0,0,0,131.216600118625,186.202745347181,22.8690920845413,203.548278945156,240.372529890511,115.530152775115,136.282660976916,1.12023300235348,1.24406970610093,3.0326731012041,7.99679052368601,0.780722657776222,0.689706313300419,0.900310649026746,3.0140963567143,4.21826294738233,3.45907044769094,3.84177070694888,25.3529303324235,0.215567992932842,0.189106080167819,0.527853372491847,0.876782929710299,1.39023624612799,1.0447564995665,0.61734640922383,1.39323986772945,0,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0.710234206755631,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,207.345889284229,22.5361101110633,6.27795687669216,8.99131926656051,2.13288250535234,2.55460339046482,2.19074684247559,1.61346819698674,3.11329261382818,0.760902504450237,7.11793592316767,1.64698954724011,1.25667604400135,2.18852119245266,1.55971269695296,9.88701349519644,8.42938394511308,8.96135729644652,0.758671603812327,0.799739588268102,3.38123207019241,0,0.387904974335251,0.350679099451593,0.316182685621286,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.947457058852424,0.162964976442026,0.169745085775188,1.40814148973101,0.167506257441816,0,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,0.327726629431476,0.518054945597687,0.578596234326046,0,0,2.45882136509518,2.48343071674259,113.830368301344,113.695335994437,0,0.757412781613119,4.41711507182759,3.51394869866975,7.53981892064796,3.34556317133573,2.67358408898873,3.67999490025482,2.42886421004937,7.89090816360542,8.69633111482352,99.2882867743384,3.83238230062325,1.78065603667255,1.62886959353576,5.77395430403874,1.32745138339963,1.21390318077491,1.209294227859,1.13163047853539,1.18120757152309,1.22974059177571,1.29214146584111,0.363533729477506,1.78248689192361,1.58018378967908,2.10837217149998,1.03135543248187,29.6182457005796,1.8006109403131,3.23396709456886,4.71541477069503,4.07882537377229,8.74007206250146,7.89835298890181,12.178597964584,0.23467170806371,0.21183207086382,13.2317038832977,0,0.161464426695906,0.120625849856312,0.119372344003136,0,8.74442509889552,120.711871608842,0,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0,0.509935289981566,0.279902904647316,0.414599921413271,0.954670618015114,1.26534397432454,1.21991680276109,1.40406943068342,1.88179466413022,0.436725127492355,1.61837215661785,1.57041565878138,2.6175594198403,2.59229946583586,7.45607175704311,0,0.747582730219894,1.15820943319968,1.75006069509643,1.42075805825504,0.844780627453891,2.69921648885234,3.51551839078665,0.838874755405687,0,0,0,0.202725215290164,0.205421914329655,0,0.358053391334963,0,0,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,1.58711268530648,0,0,0,4.82973985080476,5.44279178808428,3.6630324853453,2.57242054894879,19.0597399533438,201.051655971676,166.177410379091,169.577071978061,149.168562274321,172.640794982202,188.848474347425,167.405580057488,194.989080996087,219.774068357339,229.885578417808,1.3492355185943,1.99512436700516,4.95127456686989,2.43106717068294,4.61148957781561,4.04455718590031,3.11145418922261,7.0051919461224,8.3438994493872,4.29585259998456,5.83002389747551,5.65879024158229,4.775716880964,5.57018825922363,5.34149861287203,5.23923060411381,6.37363792696705,4.62982129112892,4.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| |phase1_expression=8.48788889655408,4.53668029931169,4.54999239389536,11.4936400296595,12.5223932486587,5.20425742926858,5.37309073369709,0,0,0,0,0,0.171200729931206,0,0,0,0,0,0,0,28.1493290400041,0,0,3.19984845586813,3.44113921600755,1.72269589234506,4.30761996159075,4.74036711908956,13.1116159424898,13.6096270070363,2.88249663851896,0,0,0,4.33277429626912,4.15586613396231,2.6542016314108,0,0,0,0,0,0,0.251793635951155,0,0,0.782391344348039,11.7733584445441,22.1883044561817,23.1371579898397,7.8392396110203,15.8127820801469,0,0,0,0.514518872071894,0,1.54701627683233,22.0524942336962,23.8045940672415,23.4517619297286,2.71075625655306,1.77858959222228,0,0,0,10.7856039786626,19.9793518767208,7.98410014775278,7.96535036156975,9.88527318351495,42.5619966761667,44.3945767312743,9.92175473641128,9.4887016308054,10.1114066527102,95.8008164694682,111.343358810284,113.054408476595,22.2887826264028,21.1336456721566,21.3574481928272,85.7091806934239,59.0900740533264,77.9271063661731,41.2480019663135,30.8946547334053,32.4335035736023,0.757261933331841,1.36028808192214,0.579728977403356,0,0.679971333707751,0,0,0,7.16266542671934,0,0,0,9.15482228548423,0,0,0,0.216491041011214,0,0,4.45317130904334,0.258937883647172,7.57054909230606,1.56136794089522,2.43572382649713,1.61430848079241,2.26083960828934,4.11560474974967,2.13633205260448,0,0.86759614151947,1.76922110389975,1.61766849947409,0.220841518460394,1.45462575940567,5.59175283654366,64.9973369365635,68.4890731279998,13.2837668708468,0,0,0,131.216600118625,186.202745347181,22.8690920845413,203.548278945156,240.372529890511,115.530152775115,136.282660976916,1.12023300235348,1.24406970610093,3.0326731012041,7.99679052368601,0.780722657776222,0.689706313300419,0.900310649026746,3.0140963567143,4.21826294738233,3.45907044769094,3.84177070694888,25.3529303324235,0.215567992932842,0.189106080167819,0.527853372491847,0.876782929710299,1.39023624612799,1.0447564995665,0.61734640922383,1.39323986772945,0,0,0,0.621377317606506,0.234526059981096,0.180062061461015,0.710234206755631,0.196764231747404,0.462801338662135,0.232533944750408,0.536546802799238,0.116765342367169,0.16455984991348,0,0.162137619091711,0.292399974850665,0.439100230582101,0.134206418760372,207.345889284229,22.5361101110633,6.27795687669216,8.99131926656051,2.13288250535234,2.55460339046482,2.19074684247559,1.61346819698674,3.11329261382818,0.760902504450237,7.11793592316767,1.64698954724011,1.25667604400135,2.18852119245266,1.55971269695296,9.88701349519644,8.42938394511308,8.96135729644652,0.758671603812327,0.799739588268102,3.38123207019241,0,0.387904974335251,0.350679099451593,0.316182685621286,0.147610147979602,0.156998727841375,0.246794327843601,0,0,0,0,0,0.241177159752417,0,0,0,0,0,0,0,0.252578877947112,0.179397413521912,0,0.184753190166605,0.947457058852424,0.162964976442026,0.169745085775188,1.40814148973101,0.167506257441816,0,0.195133647857799,0.472905432318573,0.664394068946325,0.318909537314974,0.327726629431476,0.518054945597687,0.578596234326046,0,0,2.45882136509518,2.48343071674259,113.830368301344,113.695335994437,0,0.757412781613119,4.41711507182759,3.51394869866975,7.53981892064796,3.34556317133573,2.67358408898873,3.67999490025482,2.42886421004937,7.89090816360542,8.69633111482352,99.2882867743384,3.83238230062325,1.78065603667255,1.62886959353576,5.77395430403874,1.32745138339963,1.21390318077491,1.209294227859,1.13163047853539,1.18120757152309,1.22974059177571,1.29214146584111,0.363533729477506,1.78248689192361,1.58018378967908,2.10837217149998,1.03135543248187,29.6182457005796,1.8006109403131,3.23396709456886,4.71541477069503,4.07882537377229,8.74007206250146,7.89835298890181,12.178597964584,0.23467170806371,0.21183207086382,13.2317038832977,0,0.161464426695906,0.120625849856312,0.119372344003136,0,8.74442509889552,120.711871608842,0,0.206386867963223,0.185194527369712,0.376736914009382,0.136694227721025,0,0.509935289981566,0.279902904647316,0.414599921413271,0.954670618015114,1.26534397432454,1.21991680276109,1.40406943068342,1.88179466413022,0.436725127492355,1.61837215661785,1.57041565878138,2.6175594198403,2.59229946583586,7.45607175704311,0,0.747582730219894,1.15820943319968,1.75006069509643,1.42075805825504,0.844780627453891,2.69921648885234,3.51551839078665,0.838874755405687,0,0,0,0.202725215290164,0.205421914329655,0,0.358053391334963,0,0,0.295379054349154,0.100966449948148,0,0,0.0974578807397524,0,0.233753804363138,1.58711268530648,0,0,0,4.82973985080476,5.44279178808428,3.6630324853453,2.57242054894879,19.0597399533438,201.051655971676,166.177410379091,169.577071978061,149.168562274321,172.640794982202,188.848474347425,167.405580057488,194.989080996087,219.774068357339,229.885578417808,1.3492355185943,1.99512436700516,4.95127456686989,2.43106717068294,4.61148957781561,4.04455718590031,3.11145418922261,7.0051919461224,8.3438994493872,4.29585259998456,5.83002389747551,5.65879024158229,4.775716880964,5.57018825922363,5.34149861287203,5.23923060411381,6.37363792696705,4.62982129112892,4.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| ||
|short_description=p1@Snph | |short_description=p1@Snph | ||
}} | }} |
Latest revision as of 21:39, 25 September 2015
Short description: | p1@Snph |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Snph_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | 0bp_to_ENSMUST00000028951, ENSMUST00000094456, ENSMUST00000109875, ENSMUST00000109877, ENSMUST00000133378, ENSMUST00000141692, ENSMUST00000143367, ENSMUST00000145434, ENSMUST00000146172, ENSMUST00000148755, NM_198214, uc008ned.1, uc008nee.1, uc008nef.1, uc008neg.1_5end |
EntrezGene: | Snph |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 5.52e-15 | 44 |
neurectodermal cell | 5.52e-15 | 44 |
neural cell | 1.38e-14 | 43 |
neuron | 1.72e-13 | 33 |
neuronal stem cell | 1.72e-13 | 33 |
neuroblast | 1.72e-13 | 33 |
electrically signaling cell | 1.72e-13 | 33 |
CNS neuron (sensu Vertebrata) | 1.05e-12 | 23 |
neuroblast (sensu Vertebrata) | 1.05e-12 | 23 |
electrically responsive cell | 1.88e-09 | 39 |
electrically active cell | 1.88e-09 | 39 |
embryonic cell | 9.33e-08 | 70 |